RNA–Protein interactions for RNA: ENST00000444476.1

LINC00475-208, long intergenic non-protein coding RNA 475, humanhuman

TSL 3

Gene LINC00475, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-208ENST00000444476 ZNF710Q8N1W2 664 aa18.01■□□□□ 0.47
LINC00475-208ENST00000444476 HS3ST6Q96QI5 342 aa18.01■□□□□ 0.47
LINC00475-208ENST00000444476 FAM205CA6NFA0 338 aa18■□□□□ 0.47
LINC00475-208ENST00000444476 MMRN1Q13201 1228 aa18■□□□□ 0.47
LINC00475-208ENST00000444476 DOK7Q18PE1 504 aa18■□□□□ 0.47
LINC00475-208ENST00000444476 ABCA8O94911 1581 aa17.98■□□□□ 0.47
LINC00475-208ENST00000444476 KDM5BQ9UGL1 1544 aa17.98■□□□□ 0.47
LINC00475-208ENST00000444476 HOXB3P14651 431 aaPredicted RBP17.97■□□□□ 0.47
LINC00475-208ENST00000444476 TAOK2Q9UL54 1235 aa17.96■□□□□ 0.47
LINC00475-208ENST00000444476 PLB1Q6P1J6 1458 aa17.95■□□□□ 0.46
LINC00475-208ENST00000444476 ABCC10Q5T3U5 1492 aa17.95■□□□□ 0.46
LINC00475-208ENST00000444476 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.94■□□□□ 0.46
LINC00475-208ENST00000444476 RIMBP2O15034 1052 aa17.94■□□□□ 0.46
LINC00475-208ENST00000444476 ZFP91Q96JP5 570 aaPredicted RBP17.94■□□□□ 0.46
LINC00475-208ENST00000444476 RNF25Q96BH1 459 aaPredicted RBP17.93■□□□□ 0.46
LINC00475-208ENST00000444476 P3H3Q8IVL6 736 aa17.92■□□□□ 0.46
LINC00475-208ENST00000444476 HOXB1P14653 301 aaPredicted RBP17.91■□□□□ 0.46
LINC00475-208ENST00000444476 MICALL2Q8IY33 904 aa17.91■□□□□ 0.46
LINC00475-208ENST00000444476 ZCCHC11Q5TAX3 1644 aaKnown RBP17.9■□□□□ 0.46
LINC00475-208ENST00000444476 FHOD3Q2V2M9 1422 aa17.89■□□□□ 0.46
LINC00475-208ENST00000444476 ASXL2Q76L83 1435 aa17.89■□□□□ 0.46
LINC00475-208ENST00000444476 KIF13AQ9H1H9 1805 aa17.89■□□□□ 0.45
LINC00475-208ENST00000444476 DIP2BQ9P265 1576 aa17.89■□□□□ 0.45
LINC00475-208ENST00000444476 RANGAP1P46060 587 aaPredicted RBP17.89■□□□□ 0.45
LINC00475-208ENST00000444476 RAPGEF6Q8TEU7 1601 aa17.88■□□□□ 0.45
LINC00475-208ENST00000444476 POTEB3A0JP26 581 aa17.87■□□□□ 0.45
LINC00475-208ENST00000444476 POTEBQ6S5H4 581 aa17.87■□□□□ 0.45
LINC00475-208ENST00000444476 FMN1Q68DA7 1419 aa17.87■□□□□ 0.45
LINC00475-208ENST00000444476 FAM69CQ0P6D2 419 aa17.86■□□□□ 0.45
LINC00475-208ENST00000444476 ARHGAP35Q9NRY4 1499 aa17.86■□□□□ 0.45
LINC00475-208ENST00000444476 GLI2P10070 1586 aa17.84■□□□□ 0.45
LINC00475-208ENST00000444476 KRTAP3-3Q9BYR6 98 aa17.84■□□□□ 0.45
LINC00475-208ENST00000444476 KRTAP3-2Q9BYR7 98 aa17.84■□□□□ 0.45
LINC00475-208ENST00000444476 WDR7Q9Y4E6 1490 aa17.83■□□□□ 0.45
LINC00475-208ENST00000444476 PHF8Q9UPP1 1060 aa17.83■□□□□ 0.44
LINC00475-208ENST00000444476 ERBB3P21860 1342 aa17.82■□□□□ 0.44
LINC00475-208ENST00000444476 ZSWIM6Q9HCJ5 1215 aa17.82■□□□□ 0.44
LINC00475-208ENST00000444476 ATP10BO94823 1461 aa17.81■□□□□ 0.44
LINC00475-208ENST00000444476 MS4A4AQ96JQ5 239 aa17.8■□□□□ 0.44
LINC00475-208ENST00000444476 EPRSP07814 1512 aaKnown RBP17.8■□□□□ 0.44
LINC00475-208ENST00000444476 NUP153P49790 1475 aaKnown RBP17.8■□□□□ 0.44
LINC00475-208ENST00000444476 NLRP6P59044 892 aa17.79■□□□□ 0.44
LINC00475-208ENST00000444476 CLIP1P30622 1438 aa17.77■□□□□ 0.44
LINC00475-208ENST00000444476 TMEM92Q6UXU6 159 aa17.75■□□□□ 0.43
LINC00475-208ENST00000444476 HECW1Q76N89 1606 aa17.75■□□□□ 0.43
LINC00475-208ENST00000444476 BCL11BQ9C0K0 894 aaPredicted RBP17.74■□□□□ 0.43
LINC00475-208ENST00000444476 MAP3K4Q9Y6R4 1608 aa17.72■□□□□ 0.43
LINC00475-208ENST00000444476 TEX14Q8IWB6 1497 aa17.71■□□□□ 0.43
LINC00475-208ENST00000444476 CFAP43Q8NDM7 1665 aa17.71■□□□□ 0.42
LINC00475-208ENST00000444476 PLEKHD1A6NEE1 506 aa17.7■□□□□ 0.42
LINC00475-208ENST00000444476 ARID3CA6NKF2 412 aa17.7■□□□□ 0.42
LINC00475-208ENST00000444476 STK24Q9Y6E0 443 aa17.7■□□□□ 0.42
LINC00475-208ENST00000444476 TSPOAP1O95153 1857 aa17.69■□□□□ 0.42
LINC00475-208ENST00000444476 CASKIN1Q8WXD9 1431 aa17.69■□□□□ 0.42
LINC00475-208ENST00000444476 CEP162Q5TB80 1403 aa17.68■□□□□ 0.42
LINC00475-208ENST00000444476 CDK11AQ9UQ88 783 aaPredicted RBP17.68■□□□□ 0.42
LINC00475-208ENST00000444476 KCNH8Q96L42 1107 aa17.67■□□□□ 0.42
LINC00475-208ENST00000444476 FYCO1Q9BQS8 1478 aa17.67■□□□□ 0.42
LINC00475-208ENST00000444476 CD109Q6YHK3 1445 aa17.66■□□□□ 0.42
LINC00475-208ENST00000444476 VARS2Q5ST30 1063 aaKnown RBP17.66■□□□□ 0.42
LINC00475-208ENST00000444476 CCDC18Q5T9S5 1454 aa17.66■□□□□ 0.42
LINC00475-208ENST00000444476 MAGI3Q5TCQ9 1506 aa17.66■□□□□ 0.42
LINC00475-208ENST00000444476 ABCA9Q8IUA7 1624 aa17.65■□□□□ 0.42
LINC00475-208ENST00000444476 PPRC1Q5VV67 1664 aaKnown RBP17.65■□□□□ 0.42
LINC00475-208ENST00000444476 FBXO22Q8NEZ5 403 aa17.65■□□□□ 0.42
LINC00475-208ENST00000444476 ECM2O94769 699 aaPredicted RBP17.64■□□□□ 0.41
LINC00475-208ENST00000444476 ATP1B4Q9UN42 357 aaPredicted RBP17.64■□□□□ 0.41
LINC00475-208ENST00000444476 CDK13Q14004 1512 aaKnown RBP17.63■□□□□ 0.41
LINC00475-208ENST00000444476 PCF11O94913 1555 aaKnown RBP17.63■□□□□ 0.41
LINC00475-208ENST00000444476 STK25O00506 426 aa17.63■□□□□ 0.41
LINC00475-208ENST00000444476 GPR153Q6NV75 609 aa17.63■□□□□ 0.41
LINC00475-208ENST00000444476 KDM6BO15054 1643 aa17.61■□□□□ 0.41
LINC00475-208ENST00000444476 LOC105371045A0A1W2PR82 267 aa17.6■□□□□ 0.41
LINC00475-208ENST00000444476 PHLDB1Q86UU1 1377 aa17.59■□□□□ 0.41
LINC00475-208ENST00000444476 ZNF687Q8N1G0 1237 aa17.58■□□□□ 0.4
LINC00475-208ENST00000444476 TROQ12816 1431 aaPredicted RBP17.57■□□□□ 0.4
LINC00475-208ENST00000444476 MFRPQ9BY79 579 aa17.57■□□□□ 0.4
LINC00475-208ENST00000444476 LRRIQ1Q96JM4 1722 aa17.55■□□□□ 0.4
LINC00475-208ENST00000444476 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.54■□□□□ 0.4
LINC00475-208ENST00000444476 NEO1Q92859 1461 aa17.54■□□□□ 0.4
LINC00475-208ENST00000444476 KIF14Q15058 1648 aa17.54■□□□□ 0.4
LINC00475-208ENST00000444476 ARSIQ5FYB1 569 aa17.52■□□□□ 0.4
LINC00475-208ENST00000444476 CFAP74Q9C0B2 1584 aa17.52■□□□□ 0.39
LINC00475-208ENST00000444476 ARAP3Q8WWN8 1544 aa17.51■□□□□ 0.39
LINC00475-208ENST00000444476 VPS8Q8N3P4 1428 aa17.5■□□□□ 0.39
LINC00475-208ENST00000444476 TTC37Q6PGP7 1564 aa17.49■□□□□ 0.39
LINC00475-208ENST00000444476 PLCH2O75038 1416 aa17.47■□□□□ 0.39
LINC00475-208ENST00000444476 RNF166Q96A37 237 aaPredicted RBP17.47■□□□□ 0.39
LINC00475-208ENST00000444476 MYO5CQ9NQX4 1742 aa17.47■□□□□ 0.39
LINC00475-208ENST00000444476 FANCAO15360 1455 aa17.46■□□□□ 0.39
LINC00475-208ENST00000444476 COL17A1Q9UMD9 1497 aaPredicted RBP17.46■□□□□ 0.39
LINC00475-208ENST00000444476 PTGER2P43116 358 aa17.45■□□□□ 0.38
LINC00475-208ENST00000444476 ZNF316A6NFI3 1004 aaPredicted RBP17.44■□□□□ 0.38
LINC00475-208ENST00000444476 KIF3CO14782 793 aa17.44■□□□□ 0.38
LINC00475-208ENST00000444476 MTUS2Q5JR59 1369 aa17.43■□□□□ 0.38
LINC00475-208ENST00000444476 PKD2Q13563 968 aa17.43■□□□□ 0.38
LINC00475-208ENST00000444476 MYT1LQ9UL68 1186 aa17.43■□□□□ 0.38
LINC00475-208ENST00000444476 AKNAQ7Z591 1439 aa17.42■□□□□ 0.38
LINC00475-208ENST00000444476 C2orf72A6NCS6 295 aa17.42■□□□□ 0.38
LINC00475-208ENST00000444476 RGL2O15211 777 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms