RNA–Protein interactions for RNA: ENST00000443253.1

BBX-212, Transcript of BBX, HMG-box containing, humanhuman

TSL 5

Gene BBX, Length 238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-212ENST00000443253 COL9A1P20849 921 aa9.04□□□□□ -0.96
BBX-212ENST00000443253 PDE4AP27815 886 aa9.01□□□□□ -0.97
BBX-212ENST00000443253 KIAA1468Q9P260 1216 aa9.01□□□□□ -0.97
BBX-212ENST00000443253 PCDHGA10Q9Y5H3 936 aa9.01□□□□□ -0.97
BBX-212ENST00000443253 MAP3K9P80192 1104 aa9□□□□□ -0.97
BBX-212ENST00000443253 NCKAP5LQ9HCH0 1330 aa9□□□□□ -0.97
BBX-212ENST00000443253 SEPT9Q9UHD8 586 aaPredicted RBP8.99□□□□□ -0.97
BBX-212ENST00000443253 NRG2O14511 850 aaPredicted RBP8.97□□□□□ -0.97
BBX-212ENST00000443253 FBXW7Q969H0 707 aa8.97□□□□□ -0.97
BBX-212ENST00000443253 TSR3Q9UJK0 312 aaKnown RBP8.97□□□□□ -0.97
BBX-212ENST00000443253 ONECUT3O60422 494 aaPredicted RBP8.96□□□□□ -0.98
BBX-212ENST00000443253 TYW1BQ6NUM6 668 aa8.96□□□□□ -0.98
BBX-212ENST00000443253 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.96□□□□□ -0.98
BBX-212ENST00000443253 HPS5Q9UPZ3 1129 aa8.96□□□□□ -0.98
BBX-212ENST00000443253 CHGAP10645 457 aaKnown RBP8.95□□□□□ -0.98
BBX-212ENST00000443253 PRKD2Q9BZL6 878 aa8.95□□□□□ -0.98
BBX-212ENST00000443253 RYDENQ9NUL5 291 aaKnown RBP8.95□□□□□ -0.98
BBX-212ENST00000443253 PHF14O94880 888 aa8.94□□□□□ -0.98
BBX-212ENST00000443253 NKX1-1Q15270 411 aaPredicted RBP8.94□□□□□ -0.98
BBX-212ENST00000443253 FAM98CQ17RN3 349 aaKnown RBP8.94□□□□□ -0.98
BBX-212ENST00000443253 DDX27Q96GQ7 796 aaKnown RBP8.94□□□□□ -0.98
BBX-212ENST00000443253 LRCH3Q96II8 777 aa8.94□□□□□ -0.98
BBX-212ENST00000443253 ZNF787Q6DD87 383 aa8.93□□□□□ -0.98
BBX-212ENST00000443253 LARP6Q9BRS8 491 aaKnown RBP8.93□□□□□ -0.98
BBX-212ENST00000443253 TRIM6-TRIM34B2RNG4 842 aa8.91□□□□□ -0.98
BBX-212ENST00000443253 EMILIN3Q9NT22 766 aa8.91□□□□□ -0.98
BBX-212ENST00000443253 C6orf132Q5T0Z8 1188 aa8.9□□□□□ -0.98
BBX-212ENST00000443253 DNAJC5Q9H3Z4 198 aa8.9□□□□□ -0.98
BBX-212ENST00000443253 ZNF775Q96BV0 537 aaPredicted RBP8.88□□□□□ -0.99
BBX-212ENST00000443253 V9GY48 417 aaPredicted RBP8.88□□□□□ -0.99
BBX-212ENST00000443253 PPP4CP60510 307 aa8.87□□□□□ -0.99
BBX-212ENST00000443253 MFSD10Q14728 455 aa8.87□□□□□ -0.99
BBX-212ENST00000443253 TJAP1Q5JTD0 557 aa8.87□□□□□ -0.99
BBX-212ENST00000443253 PPP1R18Q6NYC8 613 aa8.86□□□□□ -0.99
BBX-212ENST00000443253 EPAS1Q99814 870 aa8.85□□□□□ -0.99
BBX-212ENST00000443253 PDZRN3Q9UPQ7 1066 aa8.84□□□□□ -0.99
BBX-212ENST00000443253 RBM33Q96EV2 1170 aaKnown RBP8.82□□□□□ -1
BBX-212ENST00000443253 MTRQ99707 1265 aa8.82□□□□□ -1
BBX-212ENST00000443253 IL21Q9HBE4 155 aa8.82□□□□□ -1
BBX-212ENST00000443253 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.81□□□□□ -1
BBX-212ENST00000443253 PACS2Q86VP3 889 aa8.8□□□□□ -1
BBX-212ENST00000443253 TSKSQ9UJT2 592 aa8.79□□□□□ -1
BBX-212ENST00000443253 SAMD7Q7Z3H4 446 aa8.78□□□□□ -1
BBX-212ENST00000443253 ZNF516Q92618 1163 aa8.77□□□□□ -1.01
BBX-212ENST00000443253 GTPBP6O43824 516 aaPredicted RBP8.75□□□□□ -1.01
BBX-212ENST00000443253 SMAPO00193 183 aa8.74□□□□□ -1.01
BBX-212ENST00000443253 DDX12PQ92771 950 aa8.74□□□□□ -1.01
BBX-212ENST00000443253 DPYSL4O14531 572 aa8.73□□□□□ -1.01
BBX-212ENST00000443253 GGCXP38435 758 aa8.72□□□□□ -1.01
BBX-212ENST00000443253 TSR1Q2NL82 804 aaKnown RBP8.72□□□□□ -1.01
BBX-212ENST00000443253 NKX2-3Q8TAU0 364 aa8.72□□□□□ -1.01
BBX-212ENST00000443253 MAP3K7O43318 606 aa8.71□□□□□ -1.02
BBX-212ENST00000443253 EN1Q05925 392 aaPredicted RBP8.71□□□□□ -1.02
BBX-212ENST00000443253 RNF40O75150 1001 aa8.7□□□□□ -1.02
BBX-212ENST00000443253 NBR1Q14596 966 aa8.7□□□□□ -1.02
BBX-212ENST00000443253 CDCA7LQ96GN5 454 aa8.7□□□□□ -1.02
BBX-212ENST00000443253 APLP1P51693 650 aa8.69□□□□□ -1.02
BBX-212ENST00000443253 CAMK2BQ13554 666 aa8.69□□□□□ -1.02
BBX-212ENST00000443253 PKDCCQ504Y2 493 aa8.68□□□□□ -1.02
BBX-212ENST00000443253 CADPS2Q86UW7 1296 aa8.68□□□□□ -1.02
BBX-212ENST00000443253 TRIM67Q6ZTA4 783 aa8.67□□□□□ -1.02
BBX-212ENST00000443253 FAM198AQ9UFP1 575 aa8.67□□□□□ -1.02
BBX-212ENST00000443253 PNMA3Q9UL41 463 aa8.67□□□□□ -1.02
BBX-212ENST00000443253 NBPF26B4DH59 902 aa8.66□□□□□ -1.02
BBX-212ENST00000443253 PRSS12P56730 875 aa8.66□□□□□ -1.02
BBX-212ENST00000443253 MYT1Q01538 1121 aa8.66□□□□□ -1.02
BBX-212ENST00000443253 TATDN2Q93075 761 aa8.66□□□□□ -1.02
BBX-212ENST00000443253 TMUB1Q9BVT8 246 aa8.66□□□□□ -1.02
BBX-212ENST00000443253 POTECB2RU33 542 aa8.65□□□□□ -1.02
BBX-212ENST00000443253 C3orf80F5H4A9 247 aa8.65□□□□□ -1.02
BBX-212ENST00000443253 HDGFP51858 240 aaKnown RBP8.65□□□□□ -1.02
BBX-212ENST00000443253 COPS2P61201 443 aa8.65□□□□□ -1.02
BBX-212ENST00000443253 DGAT1O75907 488 aa8.64□□□□□ -1.03
BBX-212ENST00000443253 SLC19A1P41440 591 aa8.62□□□□□ -1.03
BBX-212ENST00000443253 CERKQ8TCT0 537 aa8.62□□□□□ -1.03
BBX-212ENST00000443253 NECTIN2Q92692 538 aa8.61□□□□□ -1.03
BBX-212ENST00000443253 ZPR1O75312 459 aa8.6□□□□□ -1.03
BBX-212ENST00000443253 TREML4Q6UXN2 200 aa8.6□□□□□ -1.03
BBX-212ENST00000443253 NUDT18Q6ZVK8 323 aa8.6□□□□□ -1.03
BBX-212ENST00000443253 PRR20EP86478 221 aa8.59□□□□□ -1.03
BBX-212ENST00000443253 PRR20CP86479 221 aa8.59□□□□□ -1.03
BBX-212ENST00000443253 PRR20DP86480 221 aa8.59□□□□□ -1.03
BBX-212ENST00000443253 PRR20BP86481 221 aa8.59□□□□□ -1.03
BBX-212ENST00000443253 PRR20AP86496 221 aa8.59□□□□□ -1.03
BBX-212ENST00000443253 RNF223E7ERA6 249 aa8.58□□□□□ -1.04
BBX-212ENST00000443253 PDIA6Q15084 440 aa8.58□□□□□ -1.04
BBX-212ENST00000443253 LCE2AQ5TA79 106 aaPredicted RBP8.58□□□□□ -1.04
BBX-212ENST00000443253 SPRYD7Q5W111 196 aa8.58□□□□□ -1.04
BBX-212ENST00000443253 EMID1Q96A84 441 aaPredicted RBP8.58□□□□□ -1.04
BBX-212ENST00000443253 FAM187AA6NFU0 413 aa8.57□□□□□ -1.04
BBX-212ENST00000443253 DCAF8L2P0C7V8 631 aa8.57□□□□□ -1.04
BBX-212ENST00000443253 ZNF598Q86UK7 904 aaKnown RBP8.57□□□□□ -1.04
BBX-212ENST00000443253 SWT1Q5T5J6 900 aaKnown RBP8.56□□□□□ -1.04
BBX-212ENST00000443253 SLF2Q8IX21 1173 aa8.56□□□□□ -1.04
BBX-212ENST00000443253 PRIM1P49642 420 aaKnown RBP8.54□□□□□ -1.04
BBX-212ENST00000443253 ZNF697Q5TEC3 545 aa8.53□□□□□ -1.04
BBX-212ENST00000443253 PCDHB3Q9Y5E6 796 aa8.53□□□□□ -1.04
BBX-212ENST00000443253 SPDYE16A6NNV3 312 aaPredicted RBP8.52□□□□□ -1.05
BBX-212ENST00000443253 TNFRSF10AO00220 468 aa8.52□□□□□ -1.05
BBX-212ENST00000443253 ST8SIA5O15466 376 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms