RNA–Protein interactions for RNA: ENST00000442032.2

HMGCR-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 3

Gene HMGCR, Length 268 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-203ENST00000442032 NBR1Q14596 966 aa20■□□□□ 0.79
HMGCR-203ENST00000442032 RBM33Q96EV2 1170 aaKnown RBP19.99■□□□□ 0.79
HMGCR-203ENST00000442032 GRXCR2A6NFK2 248 aa19.98■□□□□ 0.79
HMGCR-203ENST00000442032 P3H3Q8IVL6 736 aa19.96■□□□□ 0.79
HMGCR-203ENST00000442032 RNF166Q96A37 237 aaPredicted RBP19.95■□□□□ 0.78
HMGCR-203ENST00000442032 VPS9D1Q9Y2B5 631 aa19.93■□□□□ 0.78
HMGCR-203ENST00000442032 C6orf132Q5T0Z8 1188 aa19.92■□□□□ 0.78
HMGCR-203ENST00000442032 ZBED2Q9BTP6 218 aa19.92■□□□□ 0.78
HMGCR-203ENST00000442032 STAC3Q96MF2 364 aa19.91■□□□□ 0.78
HMGCR-203ENST00000442032 SLC4A5Q9BY07 1137 aa19.91■□□□□ 0.78
HMGCR-203ENST00000442032 PPP1R3GB7ZBB8 358 aa19.9■□□□□ 0.78
HMGCR-203ENST00000442032 HRO43593 1189 aa19.9■□□□□ 0.78
HMGCR-203ENST00000442032 MAP3K7O43318 606 aa19.89■□□□□ 0.77
HMGCR-203ENST00000442032 COL9A1P20849 921 aa19.89■□□□□ 0.77
HMGCR-203ENST00000442032 EN1Q05925 392 aaPredicted RBP19.89■□□□□ 0.77
HMGCR-203ENST00000442032 KDM2AQ9Y2K7 1162 aa19.89■□□□□ 0.77
HMGCR-203ENST00000442032 TSR1Q2NL82 804 aaKnown RBP19.82■□□□□ 0.76
HMGCR-203ENST00000442032 OSBPP22059 807 aa19.81■□□□□ 0.76
HMGCR-203ENST00000442032 PRIM1P49642 420 aaKnown RBP19.81■□□□□ 0.76
HMGCR-203ENST00000442032 PROX2Q3B8N5 592 aa19.8■□□□□ 0.76
HMGCR-203ENST00000442032 VSIG10Q8N0Z9 540 aa19.8■□□□□ 0.76
HMGCR-203ENST00000442032 MLLT3P42568 568 aaPredicted RBP19.78■□□□□ 0.76
HMGCR-203ENST00000442032 BHMG1C9JSJ3 638 aaPredicted RBP19.74■□□□□ 0.75
HMGCR-203ENST00000442032 MRPL50Q8N5N7 158 aaKnown RBP19.71■□□□□ 0.75
HMGCR-203ENST00000442032 NBPF3Q9H094 633 aa19.71■□□□□ 0.75
HMGCR-203ENST00000442032 RABGEF1Q9UJ41 708 aa19.71■□□□□ 0.75
HMGCR-203ENST00000442032 SEMA3EO15041 775 aa19.7■□□□□ 0.74
HMGCR-203ENST00000442032 KIAA1468Q9P260 1216 aa19.68■□□□□ 0.74
HMGCR-203ENST00000442032 GOLGA8CPA6NN73 597 aa19.67■□□□□ 0.74
HMGCR-203ENST00000442032 TRIM6-TRIM34B2RNG4 842 aa19.67■□□□□ 0.74
HMGCR-203ENST00000442032 KCTD12Q96CX2 325 aaKnown RBP19.67■□□□□ 0.74
HMGCR-203ENST00000442032 CDHR5Q9HBB8 845 aa19.67■□□□□ 0.74
HMGCR-203ENST00000442032 ONECUT3O60422 494 aaPredicted RBP19.66■□□□□ 0.74
HMGCR-203ENST00000442032 CERKQ8TCT0 537 aa19.65■□□□□ 0.74
HMGCR-203ENST00000442032 CDCA7LQ96GN5 454 aa19.6■□□□□ 0.73
HMGCR-203ENST00000442032 PRSS12P56730 875 aa19.59■□□□□ 0.73
HMGCR-203ENST00000442032 TSKSQ9UJT2 592 aa19.59■□□□□ 0.73
HMGCR-203ENST00000442032 PACS2Q86VP3 889 aa19.57■□□□□ 0.72
HMGCR-203ENST00000442032 WNT2BQ93097 391 aa19.57■□□□□ 0.72
HMGCR-203ENST00000442032 HCSTQ9UBK5 93 aa19.56■□□□□ 0.72
HMGCR-203ENST00000442032 SEPT9Q9UHD8 586 aaPredicted RBP19.56■□□□□ 0.72
HMGCR-203ENST00000442032 LAPTM4BQ86VI4 370 aa19.54■□□□□ 0.72
HMGCR-203ENST00000442032 TESPA1A2RU30 521 aaPredicted RBP19.53■□□□□ 0.72
HMGCR-203ENST00000442032 NPDC1Q9NQX5 325 aaPredicted RBP19.53■□□□□ 0.72
HMGCR-203ENST00000442032 NUTM2FA1L443 756 aa19.51■□□□□ 0.71
HMGCR-203ENST00000442032 SMYD5Q6GMV2 418 aa19.51■□□□□ 0.71
HMGCR-203ENST00000442032 FAM198AQ9UFP1 575 aa19.51■□□□□ 0.71
HMGCR-203ENST00000442032 PTPN5P54829 565 aa19.5■□□□□ 0.71
HMGCR-203ENST00000442032 THSD4Q6ZMP0 1018 aa19.48■□□□□ 0.71
HMGCR-203ENST00000442032 ANKK1Q8NFD2 765 aa19.47■□□□□ 0.71
HMGCR-203ENST00000442032 ZFRQ96KR1 1074 aaKnown RBP19.47■□□□□ 0.71
HMGCR-203ENST00000442032 FAM98CQ17RN3 349 aaKnown RBP19.46■□□□□ 0.71
HMGCR-203ENST00000442032 RBM27Q9P2N5 1060 aaKnown RBP19.46■□□□□ 0.71
HMGCR-203ENST00000442032 SMAPO00193 183 aa19.45■□□□□ 0.7
HMGCR-203ENST00000442032 PADI6Q6TGC4 694 aa19.45■□□□□ 0.7
HMGCR-203ENST00000442032 NBPF26B4DH59 902 aa19.43■□□□□ 0.7
HMGCR-203ENST00000442032 PTGDRQ13258 359 aa19.43■□□□□ 0.7
HMGCR-203ENST00000442032 PNMA3Q9UL41 463 aa19.43■□□□□ 0.7
HMGCR-203ENST00000442032 TATDN2Q93075 761 aa19.42■□□□□ 0.7
HMGCR-203ENST00000442032 RBM26Q5T8P6 1007 aaKnown RBP19.41■□□□□ 0.7
HMGCR-203ENST00000442032 C3orf80F5H4A9 247 aa19.4■□□□□ 0.7
HMGCR-203ENST00000442032 NUDT18Q6ZVK8 323 aa19.39■□□□□ 0.69
HMGCR-203ENST00000442032 BCAMP50895 628 aa19.38■□□□□ 0.69
HMGCR-203ENST00000442032 TTC13Q8NBP0 860 aa19.38■□□□□ 0.69
HMGCR-203ENST00000442032 SOWAHBA6NEL2 793 aa19.35■□□□□ 0.69
HMGCR-203ENST00000442032 FCHSD2O94868 740 aa19.35■□□□□ 0.69
HMGCR-203ENST00000442032 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.32■□□□□ 0.68
HMGCR-203ENST00000442032 LRCH3Q96II8 777 aa19.31■□□□□ 0.68
HMGCR-203ENST00000442032 SAMD7Q7Z3H4 446 aa19.27■□□□□ 0.68
HMGCR-203ENST00000442032 TULP1O00294 542 aaPredicted RBP19.25■□□□□ 0.67
HMGCR-203ENST00000442032 HDGFP51858 240 aaKnown RBP19.24■□□□□ 0.67
HMGCR-203ENST00000442032 PLA2G2EQ9NZK7 142 aa19.24■□□□□ 0.67
HMGCR-203ENST00000442032 HPS5Q9UPZ3 1129 aa19.24■□□□□ 0.67
HMGCR-203ENST00000442032 HIC1Q14526 733 aa19.22■□□□□ 0.67
HMGCR-203ENST00000442032 EYA1Q99502 592 aa19.22■□□□□ 0.67
HMGCR-203ENST00000442032 WBP1LQ9NX94 342 aa19.22■□□□□ 0.67
HMGCR-203ENST00000442032 TSR3Q9UJK0 312 aaKnown RBP19.21■□□□□ 0.67
HMGCR-203ENST00000442032 FAM161AQ3B820 660 aa19.2■□□□□ 0.66
HMGCR-203ENST00000442032 GPIHBP1Q8IV16 184 aa19.2■□□□□ 0.66
HMGCR-203ENST00000442032 ADGRG1Q9Y653 693 aa19.19■□□□□ 0.66
HMGCR-203ENST00000442032 RBM46Q8TBY0 533 aaKnown RBP19.18■□□□□ 0.66
HMGCR-203ENST00000442032 RNF40O75150 1001 aa19.16■□□□□ 0.66
HMGCR-203ENST00000442032 PPP4CP60510 307 aa19.16■□□□□ 0.66
HMGCR-203ENST00000442032 GNPATO15228 680 aa19.15■□□□□ 0.66
HMGCR-203ENST00000442032 GPR37O15354 613 aa19.15■□□□□ 0.66
HMGCR-203ENST00000442032 SWT1Q5T5J6 900 aaKnown RBP19.15■□□□□ 0.66
HMGCR-203ENST00000442032 NYAP1Q6ZVC0 841 aa19.14■□□□□ 0.65
HMGCR-203ENST00000442032 FECHP22830 423 aa19.13■□□□□ 0.65
HMGCR-203ENST00000442032 DNAJB2P25686 324 aa19.09■□□□□ 0.65
HMGCR-203ENST00000442032 OATP04181 439 aa19.07■□□□□ 0.64
HMGCR-203ENST00000442032 RCCD1A6NED2 376 aa19.06■□□□□ 0.64
HMGCR-203ENST00000442032 SLC4A3P48751 1232 aa19.06■□□□□ 0.64
HMGCR-203ENST00000442032 SLF2Q8IX21 1173 aa19.06■□□□□ 0.64
HMGCR-203ENST00000442032 PXYLP1Q8TE99 480 aa19.03■□□□□ 0.64
HMGCR-203ENST00000442032 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.02■□□□□ 0.64
HMGCR-203ENST00000442032 TMEM134Q9H6X4 195 aa19.01■□□□□ 0.63
HMGCR-203ENST00000442032 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.99■□□□□ 0.63
HMGCR-203ENST00000442032 METTL3Q86U44 580 aaKnown RBP18.99■□□□□ 0.63
HMGCR-203ENST00000442032 NECTIN2Q92692 538 aa18.99■□□□□ 0.63
HMGCR-203ENST00000442032 LMOD2Q6P5Q4 547 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms