RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 FBXW7Q969H0 707 aa9.27□□□□□ -0.93
HMGB3P9-201ENST00000441799 DPYSL4O14531 572 aa9.24□□□□□ -0.93
HMGB3P9-201ENST00000441799 C6orf132Q5T0Z8 1188 aa9.24□□□□□ -0.93
HMGB3P9-201ENST00000441799 KIAA1468Q9P260 1216 aa9.24□□□□□ -0.93
HMGB3P9-201ENST00000441799 A0A0G2JS52 829 aa9.22□□□□□ -0.93
HMGB3P9-201ENST00000441799 RGS20O76081 388 aa9.21□□□□□ -0.94
HMGB3P9-201ENST00000441799 BCAMP50895 628 aa9.21□□□□□ -0.94
HMGB3P9-201ENST00000441799 LAPTM4BQ86VI4 370 aa9.21□□□□□ -0.94
HMGB3P9-201ENST00000441799 ANKK1Q8NFD2 765 aa9.21□□□□□ -0.94
HMGB3P9-201ENST00000441799 EPAS1Q99814 870 aa9.21□□□□□ -0.94
HMGB3P9-201ENST00000441799 ONECUT3O60422 494 aaPredicted RBP9.2□□□□□ -0.94
HMGB3P9-201ENST00000441799 SOWAHBA6NEL2 793 aa9.19□□□□□ -0.94
HMGB3P9-201ENST00000441799 ZFRQ96KR1 1074 aaKnown RBP9.19□□□□□ -0.94
HMGB3P9-201ENST00000441799 SLC24A1O60721 1099 aa9.18□□□□□ -0.94
HMGB3P9-201ENST00000441799 DDX12PQ92771 950 aa9.18□□□□□ -0.94
HMGB3P9-201ENST00000441799 RBM33Q96EV2 1170 aaKnown RBP9.18□□□□□ -0.94
HMGB3P9-201ENST00000441799 ITGBL1O95965 494 aaPredicted RBP9.17□□□□□ -0.94
HMGB3P9-201ENST00000441799 BBXQ8WY36 941 aaPredicted RBP9.17□□□□□ -0.94
HMGB3P9-201ENST00000441799 SEPT9Q9UHD8 586 aaPredicted RBP9.17□□□□□ -0.94
HMGB3P9-201ENST00000441799 TRIM6-TRIM34B2RNG4 842 aa9.16□□□□□ -0.94
HMGB3P9-201ENST00000441799 WBP1LQ9NX94 342 aa9.16□□□□□ -0.94
HMGB3P9-201ENST00000441799 TSR1Q2NL82 804 aaKnown RBP9.13□□□□□ -0.95
HMGB3P9-201ENST00000441799 PDIA6Q15084 440 aa9.12□□□□□ -0.95
HMGB3P9-201ENST00000441799 FAM98CQ17RN3 349 aaKnown RBP9.12□□□□□ -0.95
HMGB3P9-201ENST00000441799 IRX2Q9BZI1 471 aaPredicted RBP9.12□□□□□ -0.95
HMGB3P9-201ENST00000441799 TSKSQ9UJT2 592 aa9.12□□□□□ -0.95
HMGB3P9-201ENST00000441799 PRIM1P49642 420 aaKnown RBP9.11□□□□□ -0.95
HMGB3P9-201ENST00000441799 EN1Q05925 392 aaPredicted RBP9.11□□□□□ -0.95
HMGB3P9-201ENST00000441799 NYAP1Q6ZVC0 841 aa9.1□□□□□ -0.95
HMGB3P9-201ENST00000441799 NBR1Q14596 966 aa9.09□□□□□ -0.95
HMGB3P9-201ENST00000441799 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.08□□□□□ -0.96
HMGB3P9-201ENST00000441799 FAM198AQ9UFP1 575 aa9.08□□□□□ -0.96
HMGB3P9-201ENST00000441799 SPDYE16A6NNV3 312 aaPredicted RBP9.07□□□□□ -0.96
HMGB3P9-201ENST00000441799 MAP3K7O43318 606 aa9.07□□□□□ -0.96
HMGB3P9-201ENST00000441799 TSR3Q9UJK0 312 aaKnown RBP9.07□□□□□ -0.96
HMGB3P9-201ENST00000441799 HPS5Q9UPZ3 1129 aa9.07□□□□□ -0.96
HMGB3P9-201ENST00000441799 C3orf80F5H4A9 247 aa9.06□□□□□ -0.96
HMGB3P9-201ENST00000441799 KCNC4Q03721 635 aa9.06□□□□□ -0.96
HMGB3P9-201ENST00000441799 PACS2Q86VP3 889 aa9.06□□□□□ -0.96
HMGB3P9-201ENST00000441799 SPRYD3Q8NCJ5 442 aa9.06□□□□□ -0.96
HMGB3P9-201ENST00000441799 LRCH3Q96II8 777 aa9.06□□□□□ -0.96
HMGB3P9-201ENST00000441799 SMAPO00193 183 aa9.04□□□□□ -0.96
HMGB3P9-201ENST00000441799 CDCA7LQ96GN5 454 aa9.04□□□□□ -0.96
HMGB3P9-201ENST00000441799 ARIH1Q9Y4X5 557 aaPredicted RBP9.04□□□□□ -0.96
HMGB3P9-201ENST00000441799 PRSS12P56730 875 aa9.03□□□□□ -0.96
HMGB3P9-201ENST00000441799 E2F4Q16254 413 aa9.03□□□□□ -0.96
HMGB3P9-201ENST00000441799 GRXCR2A6NFK2 248 aa9□□□□□ -0.97
HMGB3P9-201ENST00000441799 OSBPP22059 807 aa9□□□□□ -0.97
HMGB3P9-201ENST00000441799 SAMD7Q7Z3H4 446 aa9□□□□□ -0.97
HMGB3P9-201ENST00000441799 PPP4CP60510 307 aa8.99□□□□□ -0.97
HMGB3P9-201ENST00000441799 TJAP1Q5JTD0 557 aa8.99□□□□□ -0.97
HMGB3P9-201ENST00000441799 TATDN2Q93075 761 aa8.98□□□□□ -0.97
HMGB3P9-201ENST00000441799 CDHR5Q9HBB8 845 aa8.98□□□□□ -0.97
HMGB3P9-201ENST00000441799 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.98□□□□□ -0.97
HMGB3P9-201ENST00000441799 CERKQ8TCT0 537 aa8.97□□□□□ -0.97
HMGB3P9-201ENST00000441799 PAXIP1Q6ZW49 1069 aaPredicted RBP8.96□□□□□ -0.98
HMGB3P9-201ENST00000441799 PNMA3Q9UL41 463 aa8.96□□□□□ -0.98
HMGB3P9-201ENST00000441799 CFAP44Q96MT7 982 aa8.95□□□□□ -0.98
HMGB3P9-201ENST00000441799 NPDC1Q9NQX5 325 aaPredicted RBP8.94□□□□□ -0.98
HMGB3P9-201ENST00000441799 WDR70Q9NW82 654 aa8.94□□□□□ -0.98
HMGB3P9-201ENST00000441799 NUDT18Q6ZVK8 323 aa8.93□□□□□ -0.98
HMGB3P9-201ENST00000441799 TTC13Q8NBP0 860 aa8.93□□□□□ -0.98
HMGB3P9-201ENST00000441799 MTRQ99707 1265 aa8.93□□□□□ -0.98
HMGB3P9-201ENST00000441799 NBPF26B4DH59 902 aa8.92□□□□□ -0.98
HMGB3P9-201ENST00000441799 ZNF516Q92618 1163 aa8.92□□□□□ -0.98
HMGB3P9-201ENST00000441799 LCE2BO14633 110 aa8.91□□□□□ -0.98
HMGB3P9-201ENST00000441799 Q6ZNB5 142 aa8.91□□□□□ -0.98
HMGB3P9-201ENST00000441799 APLP1P51693 650 aa8.9□□□□□ -0.98
HMGB3P9-201ENST00000441799 IL21Q9HBE4 155 aa8.9□□□□□ -0.98
HMGB3P9-201ENST00000441799 RTN4Q9NQC3 1192 aaKnown RBP8.9□□□□□ -0.98
HMGB3P9-201ENST00000441799 RBM27Q9P2N5 1060 aaKnown RBP8.9□□□□□ -0.98
HMGB3P9-201ENST00000441799 PPP1R18Q6NYC8 613 aa8.89□□□□□ -0.99
HMGB3P9-201ENST00000441799 AMER1Q5JTC6 1135 aaPredicted RBP8.87□□□□□ -0.99
HMGB3P9-201ENST00000441799 PADI6Q6TGC4 694 aa8.87□□□□□ -0.99
HMGB3P9-201ENST00000441799 NKX2-3Q8TAU0 364 aa8.87□□□□□ -0.99
HMGB3P9-201ENST00000441799 PRKD2Q9BZL6 878 aa8.87□□□□□ -0.99
HMGB3P9-201ENST00000441799 GFRA3O60609 400 aa8.86□□□□□ -0.99
HMGB3P9-201ENST00000441799 SWT1Q5T5J6 900 aaKnown RBP8.86□□□□□ -0.99
HMGB3P9-201ENST00000441799 EYA1Q99502 592 aa8.85□□□□□ -0.99
HMGB3P9-201ENST00000441799 RNF40O75150 1001 aa8.84□□□□□ -0.99
HMGB3P9-201ENST00000441799 HDGFP51858 240 aaKnown RBP8.84□□□□□ -0.99
HMGB3P9-201ENST00000441799 LAPTM4AQ15012 233 aa8.84□□□□□ -0.99
HMGB3P9-201ENST00000441799 MLLT3P42568 568 aaPredicted RBP8.83□□□□□ -1
HMGB3P9-201ENST00000441799 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.83□□□□□ -1
HMGB3P9-201ENST00000441799 TRAF7Q6Q0C0 670 aa8.81□□□□□ -1
HMGB3P9-201ENST00000441799 V9GY48 417 aaPredicted RBP8.81□□□□□ -1
HMGB3P9-201ENST00000441799 COPS2P61201 443 aa8.8□□□□□ -1
HMGB3P9-201ENST00000441799 SLF2Q8IX21 1173 aa8.8□□□□□ -1
HMGB3P9-201ENST00000441799 MYT1Q01538 1121 aa8.79□□□□□ -1
HMGB3P9-201ENST00000441799 TSHZ2Q9NRE2 1034 aa8.79□□□□□ -1
HMGB3P9-201ENST00000441799 ARHGEF1Q92888 912 aaKnown RBP8.78□□□□□ -1
HMGB3P9-201ENST00000441799 NRG2O14511 850 aaPredicted RBP8.77□□□□□ -1.01
HMGB3P9-201ENST00000441799 ZPR1O75312 459 aa8.76□□□□□ -1.01
HMGB3P9-201ENST00000441799 PTGDRQ13258 359 aa8.76□□□□□ -1.01
HMGB3P9-201ENST00000441799 KCNV2Q8TDN2 545 aa8.76□□□□□ -1.01
HMGB3P9-201ENST00000441799 NECTIN2Q92692 538 aa8.76□□□□□ -1.01
HMGB3P9-201ENST00000441799 TTBK1Q5TCY1 1321 aaPredicted RBP8.74□□□□□ -1.01
HMGB3P9-201ENST00000441799 EMID1Q96A84 441 aaPredicted RBP8.73□□□□□ -1.01
HMGB3P9-201ENST00000441799 TMUB1Q9BVT8 246 aa8.73□□□□□ -1.01
HMGB3P9-201ENST00000441799 ADGRG1Q9Y653 693 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms