RNA–Protein interactions for RNA: ENST00000441719.5

KDM3A-205, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 8,741 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-205ENST00000441719 SLKQ9H2G2 1235 aaPredicted RBP13.48□□□□□ -0.25
KDM3A-205ENST00000441719 GZF1Q9H116 711 aaPredicted RBP13.48□□□□□ -0.25
KDM3A-205ENST00000441719 PANK3Q9H999 370 aa13.48□□□□□ -0.25
KDM3A-205ENST00000441719 NGEFQ8N5V2 710 aa13.47□□□□□ -0.25
KDM3A-205ENST00000441719 MSH5O43196 834 aa13.47□□□□□ -0.25
KDM3A-205ENST00000441719 MINK1Q8N4C8 1332 aaPredicted RBP13.47□□□□□ -0.25
KDM3A-205ENST00000441719 TOMM22Q9NS69 142 aa13.46□□□□□ -0.25
KDM3A-205ENST00000441719 CENPJQ9HC77 1338 aaPredicted RBP13.46□□□□□ -0.25
KDM3A-205ENST00000441719 MSNP26038 577 aaKnown RBP13.46□□□□□ -0.26
KDM3A-205ENST00000441719 HMMRO75330 724 aa13.45□□□□□ -0.26
KDM3A-205ENST00000441719 LMOD3Q0VAK6 560 aa13.45□□□□□ -0.26
KDM3A-205ENST00000441719 ST20-MTHFSA0A0A6YYL1 179 aa13.45□□□□□ -0.26
KDM3A-205ENST00000441719 C1orf141Q5JVX7 400 aa13.45□□□□□ -0.26
KDM3A-205ENST00000441719 COG3Q96JB2 828 aa13.45□□□□□ -0.26
KDM3A-205ENST00000441719 CHMP4AQ9BY43 222 aa13.44□□□□□ -0.26
KDM3A-205ENST00000441719 RBM19Q9Y4C8 960 aaKnown RBP13.44□□□□□ -0.26
KDM3A-205ENST00000441719 PTPRGP23470 1445 aa13.44□□□□□ -0.26
KDM3A-205ENST00000441719 CHAF1AQ13111 956 aaPredicted RBP13.43□□□□□ -0.26
KDM3A-205ENST00000441719 CCDC144AA2RUR9 1427 aa13.43□□□□□ -0.26
KDM3A-205ENST00000441719 BCL2L13Q9BXK5 485 aa13.43□□□□□ -0.26
KDM3A-205ENST00000441719 FANCD2Q9BXW9 1451 aa13.43□□□□□ -0.26
KDM3A-205ENST00000441719 L1TD1Q5T7N2 865 aaKnown RBP13.42□□□□□ -0.26
KDM3A-205ENST00000441719 NLRP13Q86W25 1043 aa13.42□□□□□ -0.26
KDM3A-205ENST00000441719 GBP4Q96PP9 640 aa13.42□□□□□ -0.26
KDM3A-205ENST00000441719 NECTIN2Q92692 538 aa13.42□□□□□ -0.26
KDM3A-205ENST00000441719 FOXD4L5Q5VV16 416 aaPredicted RBP13.41□□□□□ -0.26
KDM3A-205ENST00000441719 FOXD4L4Q8WXT5 416 aaPredicted RBP13.41□□□□□ -0.26
KDM3A-205ENST00000441719 OSCARQ8IYS5 282 aa13.41□□□□□ -0.26
KDM3A-205ENST00000441719 CREBRFQ8IUR6 639 aa13.41□□□□□ -0.26
KDM3A-205ENST00000441719 MEX3CQ5U5Q3 659 aaKnown RBP13.41□□□□□ -0.26
KDM3A-205ENST00000441719 EIF2S2P20042 333 aaKnown RBP13.41□□□□□ -0.26
KDM3A-205ENST00000441719 VGFO15240 615 aaPredicted RBP13.4□□□□□ -0.26
KDM3A-205ENST00000441719 HDAC5Q9UQL6 1122 aa13.4□□□□□ -0.26
KDM3A-205ENST00000441719 VPS53Q5VIR6 699 aa13.4□□□□□ -0.26
KDM3A-205ENST00000441719 RASSF8Q8NHQ8 419 aa13.4□□□□□ -0.26
KDM3A-205ENST00000441719 RILPL2Q969X0 211 aa13.4□□□□□ -0.26
KDM3A-205ENST00000441719 EVC2Q86UK5 1308 aa13.4□□□□□ -0.26
KDM3A-205ENST00000441719 KIF15Q9NS87 1388 aa13.39□□□□□ -0.27
KDM3A-205ENST00000441719 KIAA2012Q0VF49 1180 aa13.39□□□□□ -0.27
KDM3A-205ENST00000441719 RUSC2Q8N2Y8 1516 aa13.39□□□□□ -0.27
KDM3A-205ENST00000441719 ATAD2BQ9ULI0 1458 aa13.39□□□□□ -0.27
KDM3A-205ENST00000441719 TCERG1O14776 1098 aaKnown RBP13.39□□□□□ -0.27
KDM3A-205ENST00000441719 AEBP2Q6ZN18 517 aaPredicted RBP13.39□□□□□ -0.27
KDM3A-205ENST00000441719 SYTL4Q96C24 671 aaPredicted RBP13.39□□□□□ -0.27
KDM3A-205ENST00000441719 PDE4CQ08493 712 aa13.39□□□□□ -0.27
KDM3A-205ENST00000441719 FAM69CQ0P6D2 419 aa13.39□□□□□ -0.27
KDM3A-205ENST00000441719 HTATSF1O43719 755 aaKnown RBP13.39□□□□□ -0.27
KDM3A-205ENST00000441719 PLIN1O60240 522 aa13.38□□□□□ -0.27
KDM3A-205ENST00000441719 PSME1Q06323 249 aa13.38□□□□□ -0.27
KDM3A-205ENST00000441719 MYBBP1AQ9BQG0 1328 aaKnown RBP13.37□□□□□ -0.27
KDM3A-205ENST00000441719 DEKP35659 375 aaKnown RBP13.37□□□□□ -0.27
KDM3A-205ENST00000441719 TEFQ10587 303 aa13.37□□□□□ -0.27
KDM3A-205ENST00000441719 UACAQ9BZF9 1416 aa13.37□□□□□ -0.27
KDM3A-205ENST00000441719 CGNL1Q0VF96 1302 aa13.36□□□□□ -0.27
KDM3A-205ENST00000441719 MARCH6O60337 910 aa13.36□□□□□ -0.27
KDM3A-205ENST00000441719 ANKRD45Q5TZF3 282 aa13.36□□□□□ -0.27
KDM3A-205ENST00000441719 TTC5Q8N0Z6 440 aa13.35□□□□□ -0.27
KDM3A-205ENST00000441719 ANO8Q9HCE9 1232 aaPredicted RBP13.35□□□□□ -0.27
KDM3A-205ENST00000441719 TPM4P67936 248 aa13.34□□□□□ -0.27
KDM3A-205ENST00000441719 RAD21O60216 631 aa13.33□□□□□ -0.27
KDM3A-205ENST00000441719 PTMSP20962 102 aa13.33□□□□□ -0.28
KDM3A-205ENST00000441719 FBXW7Q969H0 707 aa13.33□□□□□ -0.28
KDM3A-205ENST00000441719 NUTM2GQ5VZR2 741 aa13.33□□□□□ -0.28
KDM3A-205ENST00000441719 PHLDB1Q86UU1 1377 aa13.32□□□□□ -0.28
KDM3A-205ENST00000441719 ARID3AQ99856 593 aa13.32□□□□□ -0.28
KDM3A-205ENST00000441719 SYAP1Q96A49 352 aaPredicted RBP13.32□□□□□ -0.28
KDM3A-205ENST00000441719 PDE3BQ13370 1112 aa13.32□□□□□ -0.28
KDM3A-205ENST00000441719 NOC3LQ8WTT2 800 aaKnown RBP13.32□□□□□ -0.28
KDM3A-205ENST00000441719 SMARCA4P51532 1647 aa13.32□□□□□ -0.28
KDM3A-205ENST00000441719 KIF16BQ96L93 1317 aa13.32□□□□□ -0.28
KDM3A-205ENST00000441719 DIAPH1O60610 1272 aaKnown RBP13.31□□□□□ -0.28
KDM3A-205ENST00000441719 FOXD4L6Q3SYB3 417 aaPredicted RBP13.31□□□□□ -0.28
KDM3A-205ENST00000441719 FOXD4L3Q6VB84 417 aaPredicted RBP13.31□□□□□ -0.28
KDM3A-205ENST00000441719 RAD54L2Q9Y4B4 1467 aa13.31□□□□□ -0.28
KDM3A-205ENST00000441719 APAF1O14727 1248 aa13.3□□□□□ -0.28
KDM3A-205ENST00000441719 PRM3Q9NNZ6 103 aa13.3□□□□□ -0.28
KDM3A-205ENST00000441719 SF3A1Q15459 793 aaKnown RBP13.3□□□□□ -0.28
KDM3A-205ENST00000441719 KLHL34Q8N239 644 aa13.3□□□□□ -0.28
KDM3A-205ENST00000441719 CRBNQ96SW2 442 aa13.3□□□□□ -0.28
KDM3A-205ENST00000441719 C9orf78Q9NZ63 289 aaPredicted RBP13.3□□□□□ -0.28
KDM3A-205ENST00000441719 USP47Q96K76 1375 aa13.3□□□□□ -0.28
KDM3A-205ENST00000441719 PRDM2Q13029 1718 aa13.3□□□□□ -0.28
KDM3A-205ENST00000441719 ZNF644Q9H582 1327 aaPredicted RBP13.3□□□□□ -0.28
KDM3A-205ENST00000441719 COG6Q9Y2V7 657 aa13.29□□□□□ -0.28
KDM3A-205ENST00000441719 ST18O60284 1047 aa13.29□□□□□ -0.28
KDM3A-205ENST00000441719 H3BQV1 296 aa13.29□□□□□ -0.28
KDM3A-205ENST00000441719 RIPK4P57078 832 aa13.29□□□□□ -0.28
KDM3A-205ENST00000441719 IFFO2Q5TF58 517 aa13.29□□□□□ -0.28
KDM3A-205ENST00000441719 ZKSCAN2Q63HK3 967 aa13.29□□□□□ -0.28
KDM3A-205ENST00000441719 CSPP1Q1MSJ5 1256 aa13.28□□□□□ -0.28
KDM3A-205ENST00000441719 NEXNQ0ZGT2 675 aa13.28□□□□□ -0.28
KDM3A-205ENST00000441719 DHX57Q6P158 1386 aaKnown RBP13.28□□□□□ -0.28
KDM3A-205ENST00000441719 GAPVD1Q14C86 1478 aa13.28□□□□□ -0.28
KDM3A-205ENST00000441719 HMOX1P09601 288 aa13.28□□□□□ -0.28
KDM3A-205ENST00000441719 EXOC6Q8TAG9 804 aa13.28□□□□□ -0.28
KDM3A-205ENST00000441719 E9PSI1 815 aa13.28□□□□□ -0.28
KDM3A-205ENST00000441719 ATF3P18847 181 aa13.28□□□□□ -0.28
KDM3A-205ENST00000441719 FAM184AQ8NB25 1140 aa13.27□□□□□ -0.29
KDM3A-205ENST00000441719 CCDC34Q96HJ3 373 aa13.27□□□□□ -0.29
KDM3A-205ENST00000441719 TRIM34Q9BYJ4 488 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms