RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 VWDEQ8N2E2 1590 aa18.69■□□□□ 0.58
CPSF4-206ENST00000441580 UHRF1BP1Q6BDS2 1440 aa18.68■□□□□ 0.58
CPSF4-206ENST00000441580 POLR1AO95602 1720 aaPredicted RBP18.68■□□□□ 0.58
CPSF4-206ENST00000441580 BCORL1Q5H9F3 1711 aa18.68■□□□□ 0.58
CPSF4-206ENST00000441580 RNF17Q9BXT8 1623 aaKnown RBP18.67■□□□□ 0.58
CPSF4-206ENST00000441580 CCDC144AA2RUR9 1427 aa18.67■□□□□ 0.58
CPSF4-206ENST00000441580 RALGAPBQ86X10 1494 aa18.66■□□□□ 0.58
CPSF4-206ENST00000441580 MLH3Q9UHC1 1453 aa18.65■□□□□ 0.58
CPSF4-206ENST00000441580 TRPM2O94759 1503 aa18.64■□□□□ 0.58
CPSF4-206ENST00000441580 MROH1Q8NDA8 1641 aa18.64■□□□□ 0.57
CPSF4-206ENST00000441580 E9PCH4 1651 aa18.64■□□□□ 0.57
CPSF4-206ENST00000441580 SPHKAPQ2M3C7 1700 aa18.64■□□□□ 0.57
CPSF4-206ENST00000441580 MIER1Q8N108 512 aa18.64■□□□□ 0.57
CPSF4-206ENST00000441580 KANK1Q14678 1352 aa18.63■□□□□ 0.57
CPSF4-206ENST00000441580 DIP2BQ9P265 1576 aa18.63■□□□□ 0.57
CPSF4-206ENST00000441580 DHX29Q7Z478 1369 aaKnown RBP18.62■□□□□ 0.57
CPSF4-206ENST00000441580 AFAP1Q8N556 730 aa18.61■□□□□ 0.57
CPSF4-206ENST00000441580 ABCA6Q8N139 1617 aa18.6■□□□□ 0.57
CPSF4-206ENST00000441580 LMTK2Q8IWU2 1503 aa18.6■□□□□ 0.57
CPSF4-206ENST00000441580 CENPBP07199 599 aaPredicted RBP18.6■□□□□ 0.57
CPSF4-206ENST00000441580 EIF4G2P78344 907 aaKnown RBP eCLIP18.6■□□□□ 0.57
CPSF4-206ENST00000441580 CEP152O94986 1710 aa18.6■□□□□ 0.57
CPSF4-206ENST00000441580 RICTORQ6R327 1708 aa18.6■□□□□ 0.57
CPSF4-206ENST00000441580 A2MP01023 1474 aa18.59■□□□□ 0.57
CPSF4-206ENST00000441580 PLA2R1Q13018 1463 aa18.59■□□□□ 0.57
CPSF4-206ENST00000441580 NEURL4Q96JN8 1562 aa18.59■□□□□ 0.57
CPSF4-206ENST00000441580 EFCAB6Q5THR3 1501 aa18.59■□□□□ 0.57
CPSF4-206ENST00000441580 LAMC1P11047 1609 aa18.58■□□□□ 0.56
CPSF4-206ENST00000441580 FRMPD1Q5SYB0 1578 aa18.58■□□□□ 0.56
CPSF4-206ENST00000441580 ZMYM4Q5VZL5 1548 aa18.55■□□□□ 0.56
CPSF4-206ENST00000441580 HSPA5P11021 654 aaKnown RBP18.55■□□□□ 0.56
CPSF4-206ENST00000441580 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.55■□□□□ 0.565e-6■□□□□ 8.1
CPSF4-206ENST00000441580 TRPM1Q7Z4N2 1603 aa18.55■□□□□ 0.56
CPSF4-206ENST00000441580 SPATA31E1Q6ZUB1 1445 aa18.55■□□□□ 0.56
CPSF4-206ENST00000441580 DIP2CQ9Y2E4 1556 aa18.55■□□□□ 0.56
CPSF4-206ENST00000441580 NBPF8Q3BBV2 869 aa18.54■□□□□ 0.56
CPSF4-206ENST00000441580 PTPRTO14522 1441 aa18.54■□□□□ 0.56
CPSF4-206ENST00000441580 ZC3H13Q5T200 1668 aaKnown RBP18.53■□□□□ 0.56
CPSF4-206ENST00000441580 PPRC1Q5VV67 1664 aaKnown RBP18.52■□□□□ 0.56
CPSF4-206ENST00000441580 CLTCL1P53675 1640 aa18.52■□□□□ 0.55
CPSF4-206ENST00000441580 PRAG1Q86YV5 1406 aa18.51■□□□□ 0.55
CPSF4-206ENST00000441580 MYT1LQ9UL68 1186 aa18.51■□□□□ 0.55
CPSF4-206ENST00000441580 USP47Q96K76 1375 aa18.5■□□□□ 0.55
CPSF4-206ENST00000441580 DDX10Q13206 875 aaKnown RBP18.49■□□□□ 0.55
CPSF4-206ENST00000441580 CYB5RLQ6IPT4 315 aa18.49■□□□□ 0.55
CPSF4-206ENST00000441580 CNTLNQ9NXG0 1405 aa18.49■□□□□ 0.55
CPSF4-206ENST00000441580 MADDQ8WXG6 1647 aa18.46■□□□□ 0.55
CPSF4-206ENST00000441580 CCDC7Q96M83 1385 aa18.46■□□□□ 0.55
CPSF4-206ENST00000441580 KIF3BO15066 747 aa18.46■□□□□ 0.55
CPSF4-206ENST00000441580 HIRIP3Q9BW71 556 aaPredicted RBP18.46■□□□□ 0.55
CPSF4-206ENST00000441580 REREQ9P2R6 1566 aa18.45■□□□□ 0.54
CPSF4-206ENST00000441580 CAMSAP1Q5T5Y3 1602 aa18.45■□□□□ 0.54
CPSF4-206ENST00000441580 ABCC3O15438 1527 aa18.44■□□□□ 0.54
CPSF4-206ENST00000441580 GPRASP1Q5JY77 1395 aa18.44■□□□□ 0.54
CPSF4-206ENST00000441580 WASHC2AQ641Q2 1341 aa18.44■□□□□ 0.54
CPSF4-206ENST00000441580 ZNF326Q5BKZ1 582 aaKnown RBP18.43■□□□□ 0.54
CPSF4-206ENST00000441580 KIF1BO60333 1816 aa18.43■□□□□ 0.54
CPSF4-206ENST00000441580 ANP32CO43423 234 aa18.42■□□□□ 0.54
CPSF4-206ENST00000441580 ARID4BQ4LE39 1312 aaPredicted RBP18.42■□□□□ 0.54
CPSF4-206ENST00000441580 ROCK2O75116 1388 aaKnown RBP18.42■□□□□ 0.54
CPSF4-206ENST00000441580 KIAA1210Q9ULL0 1709 aa18.41■□□□□ 0.54
CPSF4-206ENST00000441580 DCAF11Q8TEB1 546 aa18.41■□□□□ 0.54
CPSF4-206ENST00000441580 STAC3Q96MF2 364 aa18.41■□□□□ 0.54
CPSF4-206ENST00000441580 MYOM2P54296 1465 aa18.4■□□□□ 0.54
CPSF4-206ENST00000441580 IFT172Q9UG01 1749 aa18.4■□□□□ 0.54
CPSF4-206ENST00000441580 KIF13AQ9H1H9 1805 aa18.39■□□□□ 0.54
CPSF4-206ENST00000441580 ADGRB3O60242 1522 aa18.39■□□□□ 0.54
CPSF4-206ENST00000441580 CCER2I3L3R5 266 aa18.39■□□□□ 0.53
CPSF4-206ENST00000441580 CARD11Q9BXL7 1154 aa18.37■□□□□ 0.53
CPSF4-206ENST00000441580 TSPOAP1O95153 1857 aa18.37■□□□□ 0.53
CPSF4-206ENST00000441580 MROH2AA6NES4 1674 aa18.36■□□□□ 0.53
CPSF4-206ENST00000441580 ARHGEF40Q8TER5 1519 aa18.36■□□□□ 0.53
CPSF4-206ENST00000441580 YTHDC1Q96MU7 727 aaKnown RBP18.36■□□□□ 0.53
CPSF4-206ENST00000441580 IQGAP1P46940 1657 aa18.35■□□□□ 0.53
CPSF4-206ENST00000441580 NPATQ14207 1427 aa18.35■□□□□ 0.53
CPSF4-206ENST00000441580 KIF7Q2M1P5 1343 aa18.35■□□□□ 0.53
CPSF4-206ENST00000441580 FAM69CQ0P6D2 419 aa18.35■□□□□ 0.53
CPSF4-206ENST00000441580 AGLP35573 1532 aa18.34■□□□□ 0.53
CPSF4-206ENST00000441580 ARHGAP31Q2M1Z3 1444 aa18.33■□□□□ 0.53
CPSF4-206ENST00000441580 YEATS2Q9ULM3 1422 aa18.33■□□□□ 0.53
CPSF4-206ENST00000441580 KDM2AQ9Y2K7 1162 aa18.33■□□□□ 0.52
CPSF4-206ENST00000441580 PIK3C2BO00750 1634 aa18.33■□□□□ 0.52
CPSF4-206ENST00000441580 RAPGEF3O95398 923 aa18.32■□□□□ 0.52
CPSF4-206ENST00000441580 UGGT1Q9NYU2 1555 aa18.32■□□□□ 0.52
CPSF4-206ENST00000441580 RGL3Q3MIN7 710 aa18.3■□□□□ 0.52
CPSF4-206ENST00000441580 COL17A1Q9UMD9 1497 aaPredicted RBP18.3■□□□□ 0.52
CPSF4-206ENST00000441580 NOS1P29475 1434 aa18.29■□□□□ 0.52
CPSF4-206ENST00000441580 PPLO60437 1756 aa18.28■□□□□ 0.52
CPSF4-206ENST00000441580 NRXN1Q9ULB1 1477 aa18.27■□□□□ 0.52
CPSF4-206ENST00000441580 SIGLEC1Q9BZZ2 1709 aa18.27■□□□□ 0.52
CPSF4-206ENST00000441580 SYNMO15061 1565 aa18.26■□□□□ 0.51
CPSF4-206ENST00000441580 PREX1Q8TCU6 1659 aa18.25■□□□□ 0.51
CPSF4-206ENST00000441580 C11orf95C9JLR9 678 aaPredicted RBP18.25■□□□□ 0.51
CPSF4-206ENST00000441580 SCAF11Q99590 1463 aaKnown RBP18.25■□□□□ 0.51
CPSF4-206ENST00000441580 WASHC2CQ9Y4E1 1318 aa18.24■□□□□ 0.51
CPSF4-206ENST00000441580 EIF3AQ14152 1382 aaKnown RBP18.24■□□□□ 0.51
CPSF4-206ENST00000441580 SETBP1Q9Y6X0 1596 aa18.24■□□□□ 0.51
CPSF4-206ENST00000441580 GGT6Q6P531 493 aa18.23■□□□□ 0.51
CPSF4-206ENST00000441580 MYO3AQ8NEV4 1616 aa18.21■□□□□ 0.51
CPSF4-206ENST00000441580 ST20-MTHFSA0A0A6YYL1 179 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms