RNA–Protein interactions for RNA: ENST00000441383.5

GACAT1-202, gastric cancer associated transcript 1, humanhuman

TSL 4 BASIC

Gene GACAT1, Length 540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT1-202ENST00000441383 FBXW7Q969H0 707 aa13.25□□□□□ -0.29
GACAT1-202ENST00000441383 CFAP44Q96MT7 982 aa13.25□□□□□ -0.29
GACAT1-202ENST00000441383 MRPL50Q8N5N7 158 aaKnown RBP13.24□□□□□ -0.29
GACAT1-202ENST00000441383 DDX12PQ92771 950 aa13.21□□□□□ -0.29
GACAT1-202ENST00000441383 GOLGA8CPA6NN73 597 aa13.2□□□□□ -0.3
GACAT1-202ENST00000441383 THSD4Q6ZMP0 1018 aa13.2□□□□□ -0.3
GACAT1-202ENST00000441383 WNT2BQ93097 391 aa13.2□□□□□ -0.3
GACAT1-202ENST00000441383 EPAS1Q99814 870 aa13.2□□□□□ -0.3
GACAT1-202ENST00000441383 C6orf132Q5T0Z8 1188 aa13.19□□□□□ -0.3
GACAT1-202ENST00000441383 NBPF3Q9H094 633 aa13.19□□□□□ -0.3
GACAT1-202ENST00000441383 RBM33Q96EV2 1170 aaKnown RBP13.18□□□□□ -0.3
GACAT1-202ENST00000441383 RABGEF1Q9UJ41 708 aa13.18□□□□□ -0.3
GACAT1-202ENST00000441383 PDIA6Q15084 440 aa13.16□□□□□ -0.3
GACAT1-202ENST00000441383 E2F4Q16254 413 aa13.14□□□□□ -0.31
GACAT1-202ENST00000441383 KIAA1468Q9P260 1216 aa13.13□□□□□ -0.31
GACAT1-202ENST00000441383 NBR1Q14596 966 aa13.11□□□□□ -0.31
GACAT1-202ENST00000441383 SPDYE16A6NNV3 312 aaPredicted RBP13.09□□□□□ -0.31
GACAT1-202ENST00000441383 EN1Q05925 392 aaPredicted RBP13.09□□□□□ -0.31
GACAT1-202ENST00000441383 TSR1Q2NL82 804 aaKnown RBP13.09□□□□□ -0.31
GACAT1-202ENST00000441383 WDR70Q9NW82 654 aa13.09□□□□□ -0.31
GACAT1-202ENST00000441383 TRIM6-TRIM34B2RNG4 842 aa13.07□□□□□ -0.32
GACAT1-202ENST00000441383 SEPT9Q9UHD8 586 aaPredicted RBP13.07□□□□□ -0.32
GACAT1-202ENST00000441383 ARIH1Q9Y4X5 557 aaPredicted RBP13.07□□□□□ -0.32
GACAT1-202ENST00000441383 MAP3K7O43318 606 aa13.06□□□□□ -0.32
GACAT1-202ENST00000441383 ONECUT3O60422 494 aaPredicted RBP13.06□□□□□ -0.32
GACAT1-202ENST00000441383 PRIM1P49642 420 aaKnown RBP13.06□□□□□ -0.32
GACAT1-202ENST00000441383 BCAMP50895 628 aa13.05□□□□□ -0.32
GACAT1-202ENST00000441383 LAPTM4BQ86VI4 370 aa13.05□□□□□ -0.32
GACAT1-202ENST00000441383 ANKK1Q8NFD2 765 aa13.05□□□□□ -0.32
GACAT1-202ENST00000441383 ZFRQ96KR1 1074 aaKnown RBP13.04□□□□□ -0.32
GACAT1-202ENST00000441383 GRXCR2A6NFK2 248 aa13.02□□□□□ -0.33
GACAT1-202ENST00000441383 SOWAHBA6NEL2 793 aa13.01□□□□□ -0.33
GACAT1-202ENST00000441383 TSKSQ9UJT2 592 aa13.01□□□□□ -0.33
GACAT1-202ENST00000441383 FAM98CQ17RN3 349 aaKnown RBP12.98□□□□□ -0.33
GACAT1-202ENST00000441383 IFFO2Q5TF58 517 aa12.98□□□□□ -0.33
GACAT1-202ENST00000441383 TSHZ2Q9NRE2 1034 aa12.97□□□□□ -0.33
GACAT1-202ENST00000441383 OSBPP22059 807 aa12.96□□□□□ -0.33
GACAT1-202ENST00000441383 FAM198AQ9UFP1 575 aa12.96□□□□□ -0.33
GACAT1-202ENST00000441383 CDCA7LQ96GN5 454 aa12.95□□□□□ -0.34
GACAT1-202ENST00000441383 WBP1LQ9NX94 342 aa12.95□□□□□ -0.34
GACAT1-202ENST00000441383 PACS2Q86VP3 889 aa12.94□□□□□ -0.34
GACAT1-202ENST00000441383 CDHR5Q9HBB8 845 aa12.94□□□□□ -0.34
GACAT1-202ENST00000441383 PRSS12P56730 875 aa12.93□□□□□ -0.34
GACAT1-202ENST00000441383 C3orf80F5H4A9 247 aa12.92□□□□□ -0.34
GACAT1-202ENST00000441383 SMAPO00193 183 aa12.92□□□□□ -0.34
GACAT1-202ENST00000441383 A0A0G2JS52 829 aa12.91□□□□□ -0.34
GACAT1-202ENST00000441383 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.9□□□□□ -0.34
GACAT1-202ENST00000441383 ITGBL1O95965 494 aaPredicted RBP12.89□□□□□ -0.35
GACAT1-202ENST00000441383 LRCH3Q96II8 777 aa12.89□□□□□ -0.35
GACAT1-202ENST00000441383 CERKQ8TCT0 537 aa12.88□□□□□ -0.35
GACAT1-202ENST00000441383 HPS5Q9UPZ3 1129 aa12.88□□□□□ -0.35
GACAT1-202ENST00000441383 NYAP1Q6ZVC0 841 aa12.87□□□□□ -0.35
GACAT1-202ENST00000441383 TSR3Q9UJK0 312 aaKnown RBP12.87□□□□□ -0.35
GACAT1-202ENST00000441383 TATDN2Q93075 761 aa12.85□□□□□ -0.35
GACAT1-202ENST00000441383 SAMD7Q7Z3H4 446 aa12.84□□□□□ -0.35
GACAT1-202ENST00000441383 KCNV2Q8TDN2 545 aa12.84□□□□□ -0.35
GACAT1-202ENST00000441383 PNMA3Q9UL41 463 aa12.84□□□□□ -0.35
GACAT1-202ENST00000441383 NPDC1Q9NQX5 325 aaPredicted RBP12.83□□□□□ -0.36
GACAT1-202ENST00000441383 MLLT3P42568 568 aaPredicted RBP12.82□□□□□ -0.36
GACAT1-202ENST00000441383 NBPF26B4DH59 902 aa12.81□□□□□ -0.36
GACAT1-202ENST00000441383 NUDT18Q6ZVK8 323 aa12.81□□□□□ -0.36
GACAT1-202ENST00000441383 ARHGEF1Q92888 912 aaKnown RBP12.81□□□□□ -0.36
GACAT1-202ENST00000441383 RGS20O76081 388 aa12.8□□□□□ -0.36
GACAT1-202ENST00000441383 PPP4CP60510 307 aa12.79□□□□□ -0.36
GACAT1-202ENST00000441383 RBM27Q9P2N5 1060 aaKnown RBP12.79□□□□□ -0.36
GACAT1-202ENST00000441383 KCNC4Q03721 635 aa12.78□□□□□ -0.36
GACAT1-202ENST00000441383 PADI6Q6TGC4 694 aa12.77□□□□□ -0.37
GACAT1-202ENST00000441383 TTC13Q8NBP0 860 aa12.77□□□□□ -0.37
GACAT1-202ENST00000441383 RNF40O75150 1001 aa12.7□□□□□ -0.38
GACAT1-202ENST00000441383 TJAP1Q5JTD0 557 aa12.7□□□□□ -0.38
GACAT1-202ENST00000441383 HDGFP51858 240 aaKnown RBP12.67□□□□□ -0.38
GACAT1-202ENST00000441383 SWT1Q5T5J6 900 aaKnown RBP12.67□□□□□ -0.38
GACAT1-202ENST00000441383 EYA1Q99502 592 aa12.67□□□□□ -0.38
GACAT1-202ENST00000441383 IRX2Q9BZI1 471 aaPredicted RBP12.67□□□□□ -0.38
GACAT1-202ENST00000441383 APLP1P51693 650 aa12.66□□□□□ -0.38
GACAT1-202ENST00000441383 PTGDRQ13258 359 aa12.66□□□□□ -0.38
GACAT1-202ENST00000441383 MTRQ99707 1265 aa12.66□□□□□ -0.38
GACAT1-202ENST00000441383 SEMA3EO15041 775 aa12.63□□□□□ -0.39
GACAT1-202ENST00000441383 P3H3Q8IVL6 736 aa12.62□□□□□ -0.39
GACAT1-202ENST00000441383 ZNF516Q92618 1163 aa12.61□□□□□ -0.39
GACAT1-202ENST00000441383 IL21Q9HBE4 155 aa12.61□□□□□ -0.39
GACAT1-202ENST00000441383 NUTM2FA1L443 756 aa12.6□□□□□ -0.39
GACAT1-202ENST00000441383 PLCB2Q00722 1185 aa12.59□□□□□ -0.39
GACAT1-202ENST00000441383 SLF2Q8IX21 1173 aa12.59□□□□□ -0.39
GACAT1-202ENST00000441383 FAM161AQ3B820 660 aa12.58□□□□□ -0.4
GACAT1-202ENST00000441383 ADGRG1Q9Y653 693 aa12.57□□□□□ -0.4
GACAT1-202ENST00000441383 COPS2P61201 443 aa12.54□□□□□ -0.4
GACAT1-202ENST00000441383 PPP1R18Q6NYC8 613 aa12.54□□□□□ -0.4
GACAT1-202ENST00000441383 NKX2-3Q8TAU0 364 aa12.54□□□□□ -0.4
GACAT1-202ENST00000441383 DNAJB2P25686 324 aa12.53□□□□□ -0.4
GACAT1-202ENST00000441383 NECTIN2Q92692 538 aa12.53□□□□□ -0.4
GACAT1-202ENST00000441383 RBM46Q8TBY0 533 aaKnown RBP12.52□□□□□ -0.41
GACAT1-202ENST00000441383 FCHSD2O94868 740 aa12.51□□□□□ -0.41
GACAT1-202ENST00000441383 TMEM134Q9H6X4 195 aa12.51□□□□□ -0.41
GACAT1-202ENST00000441383 RCCD1A6NED2 376 aa12.5□□□□□ -0.41
GACAT1-202ENST00000441383 SLC4A3P48751 1232 aa12.5□□□□□ -0.41
GACAT1-202ENST00000441383 TESPA1A2RU30 521 aaPredicted RBP12.48□□□□□ -0.41
GACAT1-202ENST00000441383 RBM26Q5T8P6 1007 aaKnown RBP12.48□□□□□ -0.41
GACAT1-202ENST00000441383 PRKD2Q9BZL6 878 aa12.47□□□□□ -0.41
GACAT1-202ENST00000441383 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms