RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 SNPHO15079 494 aa7.69□□□□□ -1.18
CCDC140-202ENST00000440903 LRRIQ1Q96JM4 1722 aa7.69□□□□□ -1.18
CCDC140-202ENST00000440903 SPNS2Q8IVW8 549 aa7.68□□□□□ -1.18
CCDC140-202ENST00000440903 TMEM121BQ9BXQ6 578 aaPredicted RBP7.68□□□□□ -1.18
CCDC140-202ENST00000440903 ITSN2Q9NZM3 1697 aa7.67□□□□□ -1.18
CCDC140-202ENST00000440903 NUBP1P53384 320 aa7.67□□□□□ -1.18
CCDC140-202ENST00000440903 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.67□□□□□ -1.18
CCDC140-202ENST00000440903 DIP2BQ9P265 1576 aa7.67□□□□□ -1.18
CCDC140-202ENST00000440903 IRX5P78411 483 aaPredicted RBP7.66□□□□□ -1.18
CCDC140-202ENST00000440903 ABCC10Q5T3U5 1492 aa7.66□□□□□ -1.18
CCDC140-202ENST00000440903 CFAP74Q9C0B2 1584 aa7.66□□□□□ -1.18
CCDC140-202ENST00000440903 GLI2P10070 1586 aa7.65□□□□□ -1.18
CCDC140-202ENST00000440903 NCOA2Q15596 1464 aa7.65□□□□□ -1.18
CCDC140-202ENST00000440903 CCNB3Q8WWL7 1395 aa7.65□□□□□ -1.18
CCDC140-202ENST00000440903 MARVELD3Q96A59 401 aa7.65□□□□□ -1.18
CCDC140-202ENST00000440903 OCEL1Q9H607 264 aa7.65□□□□□ -1.18
CCDC140-202ENST00000440903 MYO5CQ9NQX4 1742 aa7.64□□□□□ -1.19
CCDC140-202ENST00000440903 ABCA9Q8IUA7 1624 aa7.64□□□□□ -1.19
CCDC140-202ENST00000440903 MAGI3Q5TCQ9 1506 aa7.64□□□□□ -1.19
CCDC140-202ENST00000440903 TEX14Q8IWB6 1497 aa7.64□□□□□ -1.19
CCDC140-202ENST00000440903 KCNH8Q96L42 1107 aa7.64□□□□□ -1.19
CCDC140-202ENST00000440903 TTC37Q6PGP7 1564 aa7.63□□□□□ -1.19
CCDC140-202ENST00000440903 ARHGAP5Q13017 1502 aa7.63□□□□□ -1.19
CCDC140-202ENST00000440903 PREX2Q70Z35 1606 aa7.63□□□□□ -1.19
CCDC140-202ENST00000440903 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.62□□□□□ -1.19
CCDC140-202ENST00000440903 ARAP3Q8WWN8 1544 aa7.62□□□□□ -1.19
CCDC140-202ENST00000440903 FAM69CQ0P6D2 419 aa7.62□□□□□ -1.19
CCDC140-202ENST00000440903 MYOM3Q5VTT5 1437 aa7.61□□□□□ -1.19
CCDC140-202ENST00000440903 CD109Q6YHK3 1445 aa7.61□□□□□ -1.19
CCDC140-202ENST00000440903 MAP3K4Q9Y6R4 1608 aa7.61□□□□□ -1.19
CCDC140-202ENST00000440903 DCAF8Q5TAQ9 597 aa7.61□□□□□ -1.19
CCDC140-202ENST00000440903 PLEKHH2Q8IVE3 1493 aa7.61□□□□□ -1.19
CCDC140-202ENST00000440903 KANK4Q5T7N3 995 aaPredicted RBP7.6□□□□□ -1.19
CCDC140-202ENST00000440903 MIA2Q96PC5 1412 aa7.6□□□□□ -1.19
CCDC140-202ENST00000440903 KIF13AQ9H1H9 1805 aa7.59□□□□□ -1.19
CCDC140-202ENST00000440903 PYGBP11216 843 aa7.59□□□□□ -1.19
CCDC140-202ENST00000440903 EMP3P54852 163 aa7.59□□□□□ -1.19
CCDC140-202ENST00000440903 EFCAB2Q5VUJ9 269 aa7.59□□□□□ -1.19
CCDC140-202ENST00000440903 C3orf67Q6ZVT6 689 aa7.59□□□□□ -1.19
CCDC140-202ENST00000440903 CFDP1Q9UEE9 299 aaPredicted RBP7.59□□□□□ -1.19
CCDC140-202ENST00000440903 FANCAO15360 1455 aa7.59□□□□□ -1.19
CCDC140-202ENST00000440903 NEO1Q92859 1461 aa7.59□□□□□ -1.19
CCDC140-202ENST00000440903 PLCH2O75038 1416 aa7.59□□□□□ -1.19
CCDC140-202ENST00000440903 PHLDB1Q86UU1 1377 aa7.59□□□□□ -1.2
CCDC140-202ENST00000440903 CDC42BPAQ5VT25 1732 aa7.58□□□□□ -1.2
CCDC140-202ENST00000440903 GPATCH8Q9UKJ3 1502 aaKnown RBP7.58□□□□□ -1.2
CCDC140-202ENST00000440903 FGD6Q6ZV73 1430 aa7.58□□□□□ -1.2
CCDC140-202ENST00000440903 ADGRL1O94910 1474 aa7.57□□□□□ -1.2
CCDC140-202ENST00000440903 CAMSAP2Q08AD1 1489 aa7.57□□□□□ -1.2
CCDC140-202ENST00000440903 PPARGC1BQ86YN6 1023 aaKnown RBP7.57□□□□□ -1.2
CCDC140-202ENST00000440903 ZNF777Q9ULD5 760 aaPredicted RBP7.57□□□□□ -1.2
CCDC140-202ENST00000440903 PTPN23Q9H3S7 1636 aa7.56□□□□□ -1.2
CCDC140-202ENST00000440903 GOLGA2Q08379 1002 aa7.56□□□□□ -1.2
CCDC140-202ENST00000440903 PCDHB8Q9UN66 801 aa7.56□□□□□ -1.2
CCDC140-202ENST00000440903 ABCC1P33527 1531 aa7.56□□□□□ -1.2
CCDC140-202ENST00000440903 TSPOAP1O95153 1857 aa7.55□□□□□ -1.2
CCDC140-202ENST00000440903 CDC42BPBQ9Y5S2 1711 aa7.55□□□□□ -1.2
CCDC140-202ENST00000440903 TCOF1Q13428 1488 aaKnown RBP7.55□□□□□ -1.2
CCDC140-202ENST00000440903 CCDC141Q6ZP82 1450 aa7.55□□□□□ -1.2
CCDC140-202ENST00000440903 SAMD9LQ8IVG5 1584 aa7.54□□□□□ -1.2
CCDC140-202ENST00000440903 AKNAQ7Z591 1439 aa7.54□□□□□ -1.2
CCDC140-202ENST00000440903 SYCP2Q9BX26 1530 aa7.54□□□□□ -1.2
CCDC140-202ENST00000440903 FAM50AQ14320 339 aaKnown RBP7.54□□□□□ -1.2
CCDC140-202ENST00000440903 DENND4BO75064 1496 aaPredicted RBP7.54□□□□□ -1.2
CCDC140-202ENST00000440903 ZNF518AQ6AHZ1 1483 aa7.54□□□□□ -1.2
CCDC140-202ENST00000440903 RRBP1Q9P2E9 1410 aaKnown RBP7.53□□□□□ -1.2
CCDC140-202ENST00000440903 KIAA1107Q9UPP5 1409 aa7.53□□□□□ -1.2
CCDC140-202ENST00000440903 KDM6BO15054 1643 aa7.53□□□□□ -1.2
CCDC140-202ENST00000440903 FAM205CA6NFA0 338 aa7.53□□□□□ -1.2
CCDC140-202ENST00000440903 MKRN3Q13064 507 aaKnown RBP7.53□□□□□ -1.2
CCDC140-202ENST00000440903 L3MBTL3Q96JM7 780 aaPredicted RBP7.53□□□□□ -1.2
CCDC140-202ENST00000440903 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.53□□□□□ -1.2
CCDC140-202ENST00000440903 ARHGEF5Q12774 1597 aa7.53□□□□□ -1.2
CCDC140-202ENST00000440903 PPRC1Q5VV67 1664 aaKnown RBP7.53□□□□□ -1.2
CCDC140-202ENST00000440903 POGZQ7Z3K3 1410 aa7.52□□□□□ -1.2
CCDC140-202ENST00000440903 SCAPERQ9BY12 1400 aa7.52□□□□□ -1.2
CCDC140-202ENST00000440903 SHANK2Q9UPX8 1470 aa7.52□□□□□ -1.21
CCDC140-202ENST00000440903 RSPH4AQ5TD94 716 aa7.52□□□□□ -1.21
CCDC140-202ENST00000440903 HS3ST6Q96QI5 342 aa7.52□□□□□ -1.21
CCDC140-202ENST00000440903 MYT1LQ9UL68 1186 aa7.52□□□□□ -1.21
CCDC140-202ENST00000440903 DNMT1P26358 1616 aaKnown RBP7.52□□□□□ -1.21
CCDC140-202ENST00000440903 CROCC2H7BZ55 1655 aa7.51□□□□□ -1.21
CCDC140-202ENST00000440903 HECW2Q9P2P5 1572 aa7.5□□□□□ -1.21
CCDC140-202ENST00000440903 TSPY4P0CV99 314 aa7.5□□□□□ -1.21
CCDC140-202ENST00000440903 TSPY10P0CW01 314 aa7.5□□□□□ -1.21
CCDC140-202ENST00000440903 DAPK1P53355 1430 aa7.5□□□□□ -1.21
CCDC140-202ENST00000440903 ZMYM4Q5VZL5 1548 aa7.49□□□□□ -1.21
CCDC140-202ENST00000440903 ADGBQ8N7X0 1667 aa7.49□□□□□ -1.21
CCDC140-202ENST00000440903 PDCD7Q8N8D1 485 aaKnown RBP7.49□□□□□ -1.21
CCDC140-202ENST00000440903 C9orf84Q5VXU9 1444 aa7.49□□□□□ -1.21
CCDC140-202ENST00000440903 KDM5CP41229 1560 aa7.49□□□□□ -1.21
CCDC140-202ENST00000440903 SPAG9O60271 1321 aaKnown RBP7.49□□□□□ -1.21
CCDC140-202ENST00000440903 MAGI2Q86UL8 1455 aa7.49□□□□□ -1.21
CCDC140-202ENST00000440903 ATP7AQ04656 1500 aa7.48□□□□□ -1.21
CCDC140-202ENST00000440903 ZFYVE16Q7Z3T8 1539 aa7.48□□□□□ -1.21
CCDC140-202ENST00000440903 ZNF467Q7Z7K2 595 aaPredicted RBP7.48□□□□□ -1.21
CCDC140-202ENST00000440903 KRTAP3-3Q9BYR6 98 aa7.48□□□□□ -1.21
CCDC140-202ENST00000440903 KRTAP3-2Q9BYR7 98 aa7.48□□□□□ -1.21
CCDC140-202ENST00000440903 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.48□□□□□ -1.21
CCDC140-202ENST00000440903 MAST1Q9Y2H9 1570 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms