RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 KCNK17Q96T54 332 aa11.47□□□□□ -0.57
CHD6-204ENST00000440647 DMRTA1Q5VZB9 504 aa11.46□□□□□ -0.57
CHD6-204ENST00000440647 BCL2L12Q9HB09 334 aa11.45□□□□□ -0.58
CHD6-204ENST00000440647 SPDYE16A6NNV3 312 aaPredicted RBP11.44□□□□□ -0.58
CHD6-204ENST00000440647 PTPREP23469 700 aa11.44□□□□□ -0.58
CHD6-204ENST00000440647 FOSBP53539 338 aa11.44□□□□□ -0.58
CHD6-204ENST00000440647 HRO43593 1189 aa11.43□□□□□ -0.58
CHD6-204ENST00000440647 JPH4Q96JJ6 628 aa11.43□□□□□ -0.58
CHD6-204ENST00000440647 SMARCA4P51532 1647 aa11.42□□□□□ -0.58
CHD6-204ENST00000440647 PDIA6Q15084 440 aa11.42□□□□□ -0.58
CHD6-204ENST00000440647 SLC4A5Q9BY07 1137 aa11.42□□□□□ -0.58
CHD6-204ENST00000440647 NCAPD3P42695 1498 aa11.42□□□□□ -0.58
CHD6-204ENST00000440647 VSIG10Q8N0Z9 540 aa11.41□□□□□ -0.58
CHD6-204ENST00000440647 ZDHHC16Q969W1 377 aa11.41□□□□□ -0.58
CHD6-204ENST00000440647 SMARCA2P51531 1590 aa11.41□□□□□ -0.58
CHD6-204ENST00000440647 KCNV2Q8TDN2 545 aa11.4□□□□□ -0.58
CHD6-204ENST00000440647 ARHGEF1Q92888 912 aaKnown RBP11.4□□□□□ -0.58
CHD6-204ENST00000440647 KDM2AQ9Y2K7 1162 aa11.4□□□□□ -0.58
CHD6-204ENST00000440647 ERCC6Q03468 1493 aa11.39□□□□□ -0.59
CHD6-204ENST00000440647 ATAD2BQ9ULI0 1458 aa11.39□□□□□ -0.59
CHD6-204ENST00000440647 VPS9D1Q9Y2B5 631 aa11.39□□□□□ -0.59
CHD6-204ENST00000440647 PHF14O94880 888 aa11.38□□□□□ -0.59
CHD6-204ENST00000440647 P3H3Q8IVL6 736 aa11.38□□□□□ -0.59
CHD6-204ENST00000440647 PCDHGA10Q9Y5H3 936 aa11.38□□□□□ -0.59
CHD6-204ENST00000440647 HMGXB3Q12766 1538 aa11.38□□□□□ -0.59
CHD6-204ENST00000440647 BAZ1AQ9NRL2 1556 aaPredicted RBP11.37□□□□□ -0.59
CHD6-204ENST00000440647 KCTD12Q96CX2 325 aaKnown RBP11.35□□□□□ -0.59
CHD6-204ENST00000440647 CUX2O14529 1486 aa11.34□□□□□ -0.59
CHD6-204ENST00000440647 GOLGA8CPA6NN73 597 aa11.34□□□□□ -0.59
CHD6-204ENST00000440647 TYW1BQ6NUM6 668 aa11.34□□□□□ -0.59
CHD6-204ENST00000440647 DDX12PQ92771 950 aa11.34□□□□□ -0.59
CHD6-204ENST00000440647 EPAS1Q99814 870 aa11.34□□□□□ -0.59
CHD6-204ENST00000440647 FBXW7Q969H0 707 aa11.33□□□□□ -0.6
CHD6-204ENST00000440647 ADAM33Q9BZ11 813 aa11.33□□□□□ -0.6
CHD6-204ENST00000440647 PLA2G2EQ9NZK7 142 aa11.33□□□□□ -0.6
CHD6-204ENST00000440647 BAZ1BQ9UIG0 1483 aaKnown RBP11.32□□□□□ -0.6
CHD6-204ENST00000440647 SLC24A1O60721 1099 aa11.32□□□□□ -0.6
CHD6-204ENST00000440647 ZBED2Q9BTP6 218 aa11.31□□□□□ -0.6
CHD6-204ENST00000440647 MRPL50Q8N5N7 158 aaKnown RBP11.3□□□□□ -0.6
CHD6-204ENST00000440647 NBPF3Q9H094 633 aa11.3□□□□□ -0.6
CHD6-204ENST00000440647 PEG3Q9GZU2 1588 aa11.28□□□□□ -0.6
CHD6-204ENST00000440647 GRXCR2A6NFK2 248 aa11.28□□□□□ -0.6
CHD6-204ENST00000440647 BHMG1C9JSJ3 638 aaPredicted RBP11.28□□□□□ -0.6
CHD6-204ENST00000440647 NBR1Q14596 966 aa11.27□□□□□ -0.61
CHD6-204ENST00000440647 PPP1R3GB7ZBB8 358 aa11.26□□□□□ -0.61
CHD6-204ENST00000440647 NESP48681 1621 aa11.26□□□□□ -0.61
CHD6-204ENST00000440647 C6orf132Q5T0Z8 1188 aa11.25□□□□□ -0.61
CHD6-204ENST00000440647 PTPN5P54829 565 aa11.24□□□□□ -0.61
CHD6-204ENST00000440647 EN1Q05925 392 aaPredicted RBP11.24□□□□□ -0.61
CHD6-204ENST00000440647 RBM33Q96EV2 1170 aaKnown RBP11.24□□□□□ -0.61
CHD6-204ENST00000440647 MROH2BQ7Z745 1585 aa11.24□□□□□ -0.61
CHD6-204ENST00000440647 OSBPP22059 807 aa11.23□□□□□ -0.61
CHD6-204ENST00000440647 WNT2BQ93097 391 aa11.23□□□□□ -0.61
CHD6-204ENST00000440647 RABGEF1Q9UJ41 708 aa11.23□□□□□ -0.61
CHD6-204ENST00000440647 LAMC3Q9Y6N6 1575 aa11.23□□□□□ -0.61
CHD6-204ENST00000440647 MAP3K7O43318 606 aa11.21□□□□□ -0.61
CHD6-204ENST00000440647 MLLT3P42568 568 aaPredicted RBP11.21□□□□□ -0.61
CHD6-204ENST00000440647 ONECUT3O60422 494 aaPredicted RBP11.2□□□□□ -0.62
CHD6-204ENST00000440647 THSD4Q6ZMP0 1018 aa11.2□□□□□ -0.62
CHD6-204ENST00000440647 THOC2Q8NI27 1593 aaKnown RBP11.2□□□□□ -0.62
CHD6-204ENST00000440647 SEMA3EO15041 775 aa11.19□□□□□ -0.62
CHD6-204ENST00000440647 COL9A1P20849 921 aa11.19□□□□□ -0.62
CHD6-204ENST00000440647 PRIM1P49642 420 aaKnown RBP11.19□□□□□ -0.62
CHD6-204ENST00000440647 KIF21AQ7Z4S6 1674 aa11.19□□□□□ -0.62
CHD6-204ENST00000440647 TSR1Q2NL82 804 aaKnown RBP11.17□□□□□ -0.62
CHD6-204ENST00000440647 LAPTM4BQ86VI4 370 aa11.17□□□□□ -0.62
CHD6-204ENST00000440647 ANKK1Q8NFD2 765 aa11.15□□□□□ -0.62
CHD6-204ENST00000440647 TESPA1A2RU30 521 aaPredicted RBP11.14□□□□□ -0.63
CHD6-204ENST00000440647 PROX2Q3B8N5 592 aa11.14□□□□□ -0.63
CHD6-204ENST00000440647 KIAA1468Q9P260 1216 aa11.14□□□□□ -0.63
CHD6-204ENST00000440647 PDS5BQ9NTI5 1447 aa11.14□□□□□ -0.63
CHD6-204ENST00000440647 WIZO95785 1651 aa11.14□□□□□ -0.63
CHD6-204ENST00000440647 CERKQ8TCT0 537 aa11.13□□□□□ -0.63
CHD6-204ENST00000440647 IFFO2Q5TF58 517 aa11.11□□□□□ -0.63
CHD6-204ENST00000440647 SMYD5Q6GMV2 418 aa11.11□□□□□ -0.63
CHD6-204ENST00000440647 TRIM6-TRIM34B2RNG4 842 aa11.09□□□□□ -0.63
CHD6-204ENST00000440647 CDHR5Q9HBB8 845 aa11.09□□□□□ -0.63
CHD6-204ENST00000440647 CADPSQ9ULU8 1353 aa11.08□□□□□ -0.64
CHD6-204ENST00000440647 NYAP1Q6ZVC0 841 aa11.08□□□□□ -0.64
CHD6-204ENST00000440647 PACS2Q86VP3 889 aa11.08□□□□□ -0.64
CHD6-204ENST00000440647 RGS20O76081 388 aa11.07□□□□□ -0.64
CHD6-204ENST00000440647 PRSS12P56730 875 aa11.07□□□□□ -0.64
CHD6-204ENST00000440647 ZFRQ96KR1 1074 aaKnown RBP11.07□□□□□ -0.64
CHD6-204ENST00000440647 NPDC1Q9NQX5 325 aaPredicted RBP11.07□□□□□ -0.64
CHD6-204ENST00000440647 SOWAHBA6NEL2 793 aa11.06□□□□□ -0.64
CHD6-204ENST00000440647 CDCA7LQ96GN5 454 aa11.06□□□□□ -0.64
CHD6-204ENST00000440647 MRC2Q9UBG0 1479 aa11.06□□□□□ -0.64
CHD6-204ENST00000440647 FAM98CQ17RN3 349 aaKnown RBP11.05□□□□□ -0.64
CHD6-204ENST00000440647 TSKSQ9UJT2 592 aa11.04□□□□□ -0.64
CHD6-204ENST00000440647 NUTM2FA1L443 756 aa11.03□□□□□ -0.64
CHD6-204ENST00000440647 RBM27Q9P2N5 1060 aaKnown RBP11.03□□□□□ -0.64
CHD6-204ENST00000440647 WDR62O43379 1518 aa11.03□□□□□ -0.64
CHD6-204ENST00000440647 CEP164Q9UPV0 1460 aa11.02□□□□□ -0.65
CHD6-204ENST00000440647 RBM26Q5T8P6 1007 aaKnown RBP11.02□□□□□ -0.65
CHD6-204ENST00000440647 SEPT9Q9UHD8 586 aaPredicted RBP11.02□□□□□ -0.65
CHD6-204ENST00000440647 BCAMP50895 628 aa11.01□□□□□ -0.65
CHD6-204ENST00000440647 PTGDRQ13258 359 aa11.01□□□□□ -0.65
CHD6-204ENST00000440647 LRCH3Q96II8 777 aa11□□□□□ -0.65
CHD6-204ENST00000440647 CDKN2AIPQ9NXV6 580 aaPredicted RBP11□□□□□ -0.65
CHD6-204ENST00000440647 FAM198AQ9UFP1 575 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms