RNA–Protein interactions for RNA: ENST00000440192.1

SDCBPP1-201, Transcript of syndecan binding protein pseudogene 1, humanhuman

BASIC

Gene SDCBPP1, Length 890 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP1-201ENST00000440192 SPDYE16A6NNV3 312 aaPredicted RBP9□□□□□ -0.97
SDCBPP1-201ENST00000440192 PPP1R3GB7ZBB8 358 aa9□□□□□ -0.97
SDCBPP1-201ENST00000440192 KCTD12Q96CX2 325 aaKnown RBP9□□□□□ -0.97
SDCBPP1-201ENST00000440192 ZBED2Q9BTP6 218 aa9□□□□□ -0.97
SDCBPP1-201ENST00000440192 HCSTQ9UBK5 93 aa9□□□□□ -0.97
SDCBPP1-201ENST00000440192 NBPF3Q9H094 633 aa8.99□□□□□ -0.97
SDCBPP1-201ENST00000440192 MRPL50Q8N5N7 158 aaKnown RBP8.98□□□□□ -0.97
SDCBPP1-201ENST00000440192 RBM33Q96EV2 1170 aaKnown RBP8.98□□□□□ -0.97
SDCBPP1-201ENST00000440192 NBR1Q14596 966 aa8.97□□□□□ -0.97
SDCBPP1-201ENST00000440192 PDIA6Q15084 440 aa8.97□□□□□ -0.97
SDCBPP1-201ENST00000440192 TSHZ2Q9NRE2 1034 aa8.96□□□□□ -0.98
SDCBPP1-201ENST00000440192 C6orf132Q5T0Z8 1188 aa8.95□□□□□ -0.98
SDCBPP1-201ENST00000440192 MAP3K7O43318 606 aa8.94□□□□□ -0.98
SDCBPP1-201ENST00000440192 COL9A1P20849 921 aa8.94□□□□□ -0.98
SDCBPP1-201ENST00000440192 GRXCR2A6NFK2 248 aa8.93□□□□□ -0.98
SDCBPP1-201ENST00000440192 BHMG1C9JSJ3 638 aaPredicted RBP8.93□□□□□ -0.98
SDCBPP1-201ENST00000440192 PROX2Q3B8N5 592 aa8.93□□□□□ -0.98
SDCBPP1-201ENST00000440192 PTPN5P54829 565 aa8.92□□□□□ -0.98
SDCBPP1-201ENST00000440192 WNT2BQ93097 391 aa8.92□□□□□ -0.98
SDCBPP1-201ENST00000440192 RABGEF1Q9UJ41 708 aa8.92□□□□□ -0.98
SDCBPP1-201ENST00000440192 ARIH1Q9Y4X5 557 aaPredicted RBP8.92□□□□□ -0.98
SDCBPP1-201ENST00000440192 EN1Q05925 392 aaPredicted RBP8.91□□□□□ -0.98
SDCBPP1-201ENST00000440192 PLA2G2EQ9NZK7 142 aa8.88□□□□□ -0.99
SDCBPP1-201ENST00000440192 KIAA1468Q9P260 1216 aa8.88□□□□□ -0.99
SDCBPP1-201ENST00000440192 ONECUT3O60422 494 aaPredicted RBP8.87□□□□□ -0.99
SDCBPP1-201ENST00000440192 TSR1Q2NL82 804 aaKnown RBP8.87□□□□□ -0.99
SDCBPP1-201ENST00000440192 THSD4Q6ZMP0 1018 aa8.87□□□□□ -0.99
SDCBPP1-201ENST00000440192 ANKK1Q8NFD2 765 aa8.87□□□□□ -0.99
SDCBPP1-201ENST00000440192 TRIM6-TRIM34B2RNG4 842 aa8.86□□□□□ -0.99
SDCBPP1-201ENST00000440192 HAP1P54257 671 aaPredicted RBP8.86□□□□□ -0.99
SDCBPP1-201ENST00000440192 LAPTM4BQ86VI4 370 aa8.86□□□□□ -0.99
SDCBPP1-201ENST00000440192 PACS2Q86VP3 889 aa8.85□□□□□ -0.99
SDCBPP1-201ENST00000440192 ARHGEF1Q92888 912 aaKnown RBP8.85□□□□□ -0.99
SDCBPP1-201ENST00000440192 CERKQ8TCT0 537 aa8.84□□□□□ -0.99
SDCBPP1-201ENST00000440192 SEPT9Q9UHD8 586 aaPredicted RBP8.84□□□□□ -0.99
SDCBPP1-201ENST00000440192 P3H3Q8IVL6 736 aa8.83□□□□□ -1
SDCBPP1-201ENST00000440192 KCNV2Q8TDN2 545 aa8.82□□□□□ -1
SDCBPP1-201ENST00000440192 ZFRQ96KR1 1074 aaKnown RBP8.82□□□□□ -1
SDCBPP1-201ENST00000440192 OSBPP22059 807 aa8.81□□□□□ -1
SDCBPP1-201ENST00000440192 FAM98CQ17RN3 349 aaKnown RBP8.81□□□□□ -1
SDCBPP1-201ENST00000440192 PRSS12P56730 875 aa8.8□□□□□ -1
SDCBPP1-201ENST00000440192 CDCA7LQ96GN5 454 aa8.8□□□□□ -1
SDCBPP1-201ENST00000440192 BCAMP50895 628 aa8.79□□□□□ -1
SDCBPP1-201ENST00000440192 TSKSQ9UJT2 592 aa8.79□□□□□ -1
SDCBPP1-201ENST00000440192 SOWAHBA6NEL2 793 aa8.78□□□□□ -1
SDCBPP1-201ENST00000440192 PRIM1P49642 420 aaKnown RBP8.78□□□□□ -1
SDCBPP1-201ENST00000440192 LRCH3Q96II8 777 aa8.77□□□□□ -1.01
SDCBPP1-201ENST00000440192 CDHR5Q9HBB8 845 aa8.77□□□□□ -1.01
SDCBPP1-201ENST00000440192 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.77□□□□□ -1.01
SDCBPP1-201ENST00000440192 NBPF26B4DH59 902 aa8.76□□□□□ -1.01
SDCBPP1-201ENST00000440192 VSIG10Q8N0Z9 540 aa8.76□□□□□ -1.01
SDCBPP1-201ENST00000440192 MLLT3P42568 568 aaPredicted RBP8.75□□□□□ -1.01
SDCBPP1-201ENST00000440192 PNMA3Q9UL41 463 aa8.75□□□□□ -1.01
SDCBPP1-201ENST00000440192 SMAPO00193 183 aa8.74□□□□□ -1.01
SDCBPP1-201ENST00000440192 HDGFP51858 240 aaKnown RBP8.74□□□□□ -1.01
SDCBPP1-201ENST00000440192 TATDN2Q93075 761 aa8.74□□□□□ -1.01
SDCBPP1-201ENST00000440192 NYAP1Q6ZVC0 841 aa8.73□□□□□ -1.01
SDCBPP1-201ENST00000440192 RBM27Q9P2N5 1060 aaKnown RBP8.73□□□□□ -1.01
SDCBPP1-201ENST00000440192 HPS5Q9UPZ3 1129 aa8.73□□□□□ -1.01
SDCBPP1-201ENST00000440192 WBP1LQ9NX94 342 aa8.72□□□□□ -1.01
SDCBPP1-201ENST00000440192 TSR3Q9UJK0 312 aaKnown RBP8.72□□□□□ -1.01
SDCBPP1-201ENST00000440192 NUDT18Q6ZVK8 323 aa8.71□□□□□ -1.02
SDCBPP1-201ENST00000440192 FAM198AQ9UFP1 575 aa8.71□□□□□ -1.02
SDCBPP1-201ENST00000440192 NUTM2FA1L443 756 aa8.7□□□□□ -1.02
SDCBPP1-201ENST00000440192 PPP4CP60510 307 aa8.7□□□□□ -1.02
SDCBPP1-201ENST00000440192 PADI6Q6TGC4 694 aa8.7□□□□□ -1.02
SDCBPP1-201ENST00000440192 SAMD7Q7Z3H4 446 aa8.7□□□□□ -1.02
SDCBPP1-201ENST00000440192 RNF40O75150 1001 aa8.69□□□□□ -1.02
SDCBPP1-201ENST00000440192 SEMA3EO15041 775 aa8.68□□□□□ -1.02
SDCBPP1-201ENST00000440192 SLC4A3P48751 1232 aa8.67□□□□□ -1.02
SDCBPP1-201ENST00000440192 SMYD5Q6GMV2 418 aa8.67□□□□□ -1.02
SDCBPP1-201ENST00000440192 NPDC1Q9NQX5 325 aaPredicted RBP8.67□□□□□ -1.02
SDCBPP1-201ENST00000440192 IFFO2Q5TF58 517 aa8.66□□□□□ -1.02
SDCBPP1-201ENST00000440192 KDM2AQ9Y2K7 1162 aa8.66□□□□□ -1.02
SDCBPP1-201ENST00000440192 C3orf80F5H4A9 247 aa8.65□□□□□ -1.02
SDCBPP1-201ENST00000440192 BCANQ96GW7 911 aa8.65□□□□□ -1.02
SDCBPP1-201ENST00000440192 KCNC4Q03721 635 aa8.64□□□□□ -1.03
SDCBPP1-201ENST00000440192 PTGDRQ13258 359 aa8.64□□□□□ -1.03
SDCBPP1-201ENST00000440192 TTC13Q8NBP0 860 aa8.64□□□□□ -1.03
SDCBPP1-201ENST00000440192 NECTIN2Q92692 538 aa8.64□□□□□ -1.03
SDCBPP1-201ENST00000440192 ITGBL1O95965 494 aaPredicted RBP8.63□□□□□ -1.03
SDCBPP1-201ENST00000440192 A0A0G2JS52 829 aa8.62□□□□□ -1.03
SDCBPP1-201ENST00000440192 FCHSD2O94868 740 aa8.62□□□□□ -1.03
SDCBPP1-201ENST00000440192 SWT1Q5T5J6 900 aaKnown RBP8.61□□□□□ -1.03
SDCBPP1-201ENST00000440192 SLF2Q8IX21 1173 aa8.61□□□□□ -1.03
SDCBPP1-201ENST00000440192 RBM46Q8TBY0 533 aaKnown RBP8.61□□□□□ -1.03
SDCBPP1-201ENST00000440192 TESPA1A2RU30 521 aaPredicted RBP8.59□□□□□ -1.03
SDCBPP1-201ENST00000440192 RGS20O76081 388 aa8.58□□□□□ -1.04
SDCBPP1-201ENST00000440192 EYA1Q99502 592 aa8.58□□□□□ -1.04
SDCBPP1-201ENST00000440192 DNAJB2P25686 324 aa8.57□□□□□ -1.04
SDCBPP1-201ENST00000440192 RBM26Q5T8P6 1007 aaKnown RBP8.57□□□□□ -1.04
SDCBPP1-201ENST00000440192 ADGRG1Q9Y653 693 aa8.56□□□□□ -1.04
SDCBPP1-201ENST00000440192 HIC1Q14526 733 aa8.55□□□□□ -1.04
SDCBPP1-201ENST00000440192 TULP1O00294 542 aaPredicted RBP8.54□□□□□ -1.04
SDCBPP1-201ENST00000440192 FAM161AQ3B820 660 aa8.54□□□□□ -1.04
SDCBPP1-201ENST00000440192 MTRQ99707 1265 aa8.54□□□□□ -1.04
SDCBPP1-201ENST00000440192 PRR14Q9BWN1 585 aa8.54□□□□□ -1.04
SDCBPP1-201ENST00000440192 IL21Q9HBE4 155 aa8.54□□□□□ -1.04
SDCBPP1-201ENST00000440192 OATP04181 439 aa8.53□□□□□ -1.04
SDCBPP1-201ENST00000440192 APLP1P51693 650 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms