RNA–Protein interactions for RNA: ENST00000439406.5

HCG20-208, Transcript of HLA complex group 20, humanhuman

TSL 2 BASIC

Gene HCG20, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG20-208ENST00000439406 RNF39Q9H2S5 420 aa11.88□□□□□ -0.51
HCG20-208ENST00000439406 SCAPERQ9BY12 1400 aa11.87□□□□□ -0.51
HCG20-208ENST00000439406 EFCAB2Q5VUJ9 269 aa11.86□□□□□ -0.51
HCG20-208ENST00000439406 ZMYND15Q9H091 742 aa11.86□□□□□ -0.51
HCG20-208ENST00000439406 SAMD9Q5K651 1589 aa11.86□□□□□ -0.51
HCG20-208ENST00000439406 HECW1Q76N89 1606 aa11.86□□□□□ -0.51
HCG20-208ENST00000439406 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.86□□□□□ -0.51
HCG20-208ENST00000439406 PLCH2O75038 1416 aa11.86□□□□□ -0.51
HCG20-208ENST00000439406 C9orf84Q5VXU9 1444 aa11.86□□□□□ -0.51
HCG20-208ENST00000439406 RSPH6AQ9H0K4 717 aa11.85□□□□□ -0.51
HCG20-208ENST00000439406 SIGLEC1Q9BZZ2 1709 aa11.85□□□□□ -0.51
HCG20-208ENST00000439406 ESF1Q9H501 851 aaKnown RBP11.83□□□□□ -0.52
HCG20-208ENST00000439406 LTBP4Q8N2S1 1624 aa11.82□□□□□ -0.52
HCG20-208ENST00000439406 TRAPPC8Q9Y2L5 1435 aa11.81□□□□□ -0.52
HCG20-208ENST00000439406 ZBTB47Q9UFB7 747 aaPredicted RBP11.81□□□□□ -0.52
HCG20-208ENST00000439406 CDK11AQ9UQ88 783 aaPredicted RBP11.79□□□□□ -0.52
HCG20-208ENST00000439406 UBAP1LF5GYI3 381 aa11.78□□□□□ -0.52
HCG20-208ENST00000439406 AFAP1Q8N556 730 aa11.78□□□□□ -0.52
HCG20-208ENST00000439406 MYT1LQ9UL68 1186 aa11.78□□□□□ -0.52
HCG20-208ENST00000439406 ZNF518AQ6AHZ1 1483 aa11.77□□□□□ -0.52
HCG20-208ENST00000439406 CCDC9Q9Y3X0 531 aaKnown RBP11.77□□□□□ -0.53
HCG20-208ENST00000439406 NCOA1Q15788 1441 aa11.77□□□□□ -0.53
HCG20-208ENST00000439406 PLEKHG5O94827 1062 aa11.76□□□□□ -0.53
HCG20-208ENST00000439406 ZC3H15Q8WU90 426 aaKnown RBP11.76□□□□□ -0.53
HCG20-208ENST00000439406 RYDENQ9NUL5 291 aaKnown RBP11.76□□□□□ -0.53
HCG20-208ENST00000439406 RNF25Q96BH1 459 aaPredicted RBP11.75□□□□□ -0.53
HCG20-208ENST00000439406 ARID3AQ99856 593 aa11.75□□□□□ -0.53
HCG20-208ENST00000439406 SLC24A3Q9HC58 644 aa11.75□□□□□ -0.53
HCG20-208ENST00000439406 WDR70Q9NW82 654 aa11.74□□□□□ -0.53
HCG20-208ENST00000439406 CNTLNQ9NXG0 1405 aa11.74□□□□□ -0.53
HCG20-208ENST00000439406 ZBTB7CA1YPR0 619 aa11.73□□□□□ -0.53
HCG20-208ENST00000439406 REREQ9P2R6 1566 aa11.73□□□□□ -0.53
HCG20-208ENST00000439406 C3P01024 1663 aa11.72□□□□□ -0.53
HCG20-208ENST00000439406 AGLP35573 1532 aa11.72□□□□□ -0.53
HCG20-208ENST00000439406 MLH3Q9UHC1 1453 aa11.72□□□□□ -0.53
HCG20-208ENST00000439406 POLA2Q14181 598 aa11.72□□□□□ -0.53
HCG20-208ENST00000439406 KCNV2Q8TDN2 545 aa11.72□□□□□ -0.53
HCG20-208ENST00000439406 NPATQ14207 1427 aa11.71□□□□□ -0.53
HCG20-208ENST00000439406 ZNF335Q9H4Z2 1342 aaPredicted RBP11.71□□□□□ -0.53
HCG20-208ENST00000439406 KDM5CP41229 1560 aa11.71□□□□□ -0.54
HCG20-208ENST00000439406 NCKAP5LQ9HCH0 1330 aa11.7□□□□□ -0.54
HCG20-208ENST00000439406 RIOK3O14730 519 aaKnown RBP11.7□□□□□ -0.54
HCG20-208ENST00000439406 TOM1O60784 492 aa11.7□□□□□ -0.54
HCG20-208ENST00000439406 ZMYM3Q14202 1370 aa11.69□□□□□ -0.54
HCG20-208ENST00000439406 STK25O00506 426 aa11.69□□□□□ -0.54
HCG20-208ENST00000439406 ATP1B4Q9UN42 357 aaPredicted RBP11.69□□□□□ -0.54
HCG20-208ENST00000439406 MYO5CQ9NQX4 1742 aa11.69□□□□□ -0.54
HCG20-208ENST00000439406 CAMSAP1Q5T5Y3 1602 aa11.68□□□□□ -0.54
HCG20-208ENST00000439406 C1QBPQ07021 282 aaKnown RBP11.68□□□□□ -0.54
HCG20-208ENST00000439406 GSE1Q14687 1217 aa11.68□□□□□ -0.54
HCG20-208ENST00000439406 DIP2CQ9Y2E4 1556 aa11.67□□□□□ -0.54
HCG20-208ENST00000439406 CDK13Q14004 1512 aaKnown RBP11.67□□□□□ -0.54
HCG20-208ENST00000439406 HSPA1LP34931 641 aa11.67□□□□□ -0.54
HCG20-208ENST00000439406 EEA1Q15075 1411 aa11.67□□□□□ -0.54
HCG20-208ENST00000439406 ARHGAP5Q13017 1502 aa11.66□□□□□ -0.54
HCG20-208ENST00000439406 PDIA4P13667 645 aaKnown RBP11.66□□□□□ -0.54
HCG20-208ENST00000439406 PLA2R1Q13018 1463 aa11.65□□□□□ -0.54
HCG20-208ENST00000439406 ZBTB12Q9Y330 459 aaPredicted RBP11.65□□□□□ -0.54
HCG20-208ENST00000439406 FMN1Q68DA7 1419 aa11.65□□□□□ -0.54
HCG20-208ENST00000439406 CLIP1P30622 1438 aa11.64□□□□□ -0.55
HCG20-208ENST00000439406 TROQ12816 1431 aaPredicted RBP11.64□□□□□ -0.55
HCG20-208ENST00000439406 PIP4K2BP78356 416 aa11.63□□□□□ -0.55
HCG20-208ENST00000439406 TCOF1Q13428 1488 aaKnown RBP11.62□□□□□ -0.55
HCG20-208ENST00000439406 MROH2AA6NES4 1674 aa11.62□□□□□ -0.55
HCG20-208ENST00000439406 KIF14Q15058 1648 aa11.61□□□□□ -0.55
HCG20-208ENST00000439406 ABCA6Q8N139 1617 aa11.61□□□□□ -0.55
HCG20-208ENST00000439406 VGFO15240 615 aaPredicted RBP11.61□□□□□ -0.55
HCG20-208ENST00000439406 ZNF692Q9BU19 519 aaPredicted RBP11.61□□□□□ -0.55
HCG20-208ENST00000439406 MED1Q15648 1581 aaPredicted RBP11.61□□□□□ -0.55
HCG20-208ENST00000439406 CDC42BPBQ9Y5S2 1711 aa11.58□□□□□ -0.56
HCG20-208ENST00000439406 CPS1P31327 1500 aa11.58□□□□□ -0.56
HCG20-208ENST00000439406 KIDINS220Q9ULH0 1771 aa11.58□□□□□ -0.56
HCG20-208ENST00000439406 PTPRKQ15262 1439 aa11.58□□□□□ -0.56
HCG20-208ENST00000439406 SPAG9O60271 1321 aaKnown RBP11.58□□□□□ -0.56
HCG20-208ENST00000439406 GGT6Q6P531 493 aa11.56□□□□□ -0.56
HCG20-208ENST00000439406 C1orf115Q9H7X2 142 aa11.56□□□□□ -0.56
HCG20-208ENST00000439406 ZNF142P52746 1687 aaPredicted RBP11.55□□□□□ -0.56
HCG20-208ENST00000439406 ABCC1P33527 1531 aa11.55□□□□□ -0.56
HCG20-208ENST00000439406 CEP170BQ9Y4F5 1589 aaPredicted RBP11.55□□□□□ -0.56
HCG20-208ENST00000439406 ANKLE2Q86XL3 938 aa11.55□□□□□ -0.56
HCG20-208ENST00000439406 SHANK2Q9UPX8 1470 aa11.55□□□□□ -0.56
HCG20-208ENST00000439406 SUPT6HQ7KZ85 1726 aaKnown RBP11.55□□□□□ -0.56
HCG20-208ENST00000439406 STK24Q9Y6E0 443 aa11.54□□□□□ -0.56
HCG20-208ENST00000439406 ITSN2Q9NZM3 1697 aa11.53□□□□□ -0.56
HCG20-208ENST00000439406 A2ML1A8K2U0 1454 aa11.53□□□□□ -0.56
HCG20-208ENST00000439406 THEMISQ8N1K5 641 aaPredicted RBP11.53□□□□□ -0.56
HCG20-208ENST00000439406 ZNF777Q9ULD5 760 aaPredicted RBP11.53□□□□□ -0.56
HCG20-208ENST00000439406 ZMYND10O75800 440 aa11.52□□□□□ -0.57
HCG20-208ENST00000439406 HNRNPMP52272 730 aaKnown RBP eCLIP11.52□□□□□ -0.57
HCG20-208ENST00000439406 PREX2Q70Z35 1606 aa11.52□□□□□ -0.57
HCG20-208ENST00000439406 MYO3AQ8NEV4 1616 aa11.52□□□□□ -0.57
HCG20-208ENST00000439406 SAMD9LQ8IVG5 1584 aa11.51□□□□□ -0.57
HCG20-208ENST00000439406 ARHGEF1Q92888 912 aaKnown RBP11.51□□□□□ -0.57
HCG20-208ENST00000439406 KIAA1107Q9UPP5 1409 aa11.51□□□□□ -0.57
HCG20-208ENST00000439406 A2MP01023 1474 aa11.51□□□□□ -0.57
HCG20-208ENST00000439406 ARHGAP35Q9NRY4 1499 aa11.51□□□□□ -0.57
HCG20-208ENST00000439406 DNMT1P26358 1616 aaKnown RBP11.5□□□□□ -0.57
HCG20-208ENST00000439406 CLTCQ00610 1675 aaKnown RBP11.5□□□□□ -0.57
HCG20-208ENST00000439406 APBB1O00213 710 aa11.5□□□□□ -0.57
HCG20-208ENST00000439406 IL27Q8NEV9 243 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms