RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 GOLGA8CPA6NN73 597 aa11.96□□□□□ -0.49
UPP2-IT1-201ENST00000439185 MRPL50Q8N5N7 158 aaKnown RBP11.96□□□□□ -0.49
UPP2-IT1-201ENST00000439185 EPAS1Q99814 870 aa11.96□□□□□ -0.49
UPP2-IT1-201ENST00000439185 PTPN5P54829 565 aa11.95□□□□□ -0.5
UPP2-IT1-201ENST00000439185 DDX12PQ92771 950 aa11.95□□□□□ -0.5
UPP2-IT1-201ENST00000439185 PROX2Q3B8N5 592 aa11.94□□□□□ -0.5
UPP2-IT1-201ENST00000439185 NBPF3Q9H094 633 aa11.93□□□□□ -0.5
UPP2-IT1-201ENST00000439185 C6orf132Q5T0Z8 1188 aa11.92□□□□□ -0.5
UPP2-IT1-201ENST00000439185 WNT2BQ93097 391 aa11.92□□□□□ -0.5
UPP2-IT1-201ENST00000439185 RBM33Q96EV2 1170 aaKnown RBP11.92□□□□□ -0.5
UPP2-IT1-201ENST00000439185 WDR70Q9NW82 654 aa11.92□□□□□ -0.5
UPP2-IT1-201ENST00000439185 E2F4Q16254 413 aa11.91□□□□□ -0.5
UPP2-IT1-201ENST00000439185 RABGEF1Q9UJ41 708 aa11.91□□□□□ -0.5
UPP2-IT1-201ENST00000439185 THSD4Q6ZMP0 1018 aa11.9□□□□□ -0.5
UPP2-IT1-201ENST00000439185 PDIA6Q15084 440 aa11.89□□□□□ -0.51
UPP2-IT1-201ENST00000439185 SPDYE16A6NNV3 312 aaPredicted RBP11.87□□□□□ -0.51
UPP2-IT1-201ENST00000439185 KIAA1468Q9P260 1216 aa11.87□□□□□ -0.51
UPP2-IT1-201ENST00000439185 NBR1Q14596 966 aa11.86□□□□□ -0.51
UPP2-IT1-201ENST00000439185 MAP3K7O43318 606 aa11.83□□□□□ -0.52
UPP2-IT1-201ENST00000439185 ONECUT3O60422 494 aaPredicted RBP11.82□□□□□ -0.52
UPP2-IT1-201ENST00000439185 EN1Q05925 392 aaPredicted RBP11.82□□□□□ -0.52
UPP2-IT1-201ENST00000439185 ARIH1Q9Y4X5 557 aaPredicted RBP11.82□□□□□ -0.52
UPP2-IT1-201ENST00000439185 TRIM6-TRIM34B2RNG4 842 aa11.81□□□□□ -0.52
UPP2-IT1-201ENST00000439185 TSR1Q2NL82 804 aaKnown RBP11.81□□□□□ -0.52
UPP2-IT1-201ENST00000439185 LAPTM4BQ86VI4 370 aa11.81□□□□□ -0.52
UPP2-IT1-201ENST00000439185 ANKK1Q8NFD2 765 aa11.81□□□□□ -0.52
UPP2-IT1-201ENST00000439185 GRXCR2A6NFK2 248 aa11.79□□□□□ -0.52
UPP2-IT1-201ENST00000439185 SEPT9Q9UHD8 586 aaPredicted RBP11.79□□□□□ -0.52
UPP2-IT1-201ENST00000439185 ZFRQ96KR1 1074 aaKnown RBP11.77□□□□□ -0.53
UPP2-IT1-201ENST00000439185 TSHZ2Q9NRE2 1034 aa11.77□□□□□ -0.53
UPP2-IT1-201ENST00000439185 PRIM1P49642 420 aaKnown RBP11.76□□□□□ -0.53
UPP2-IT1-201ENST00000439185 BCAMP50895 628 aa11.76□□□□□ -0.53
UPP2-IT1-201ENST00000439185 SOWAHBA6NEL2 793 aa11.74□□□□□ -0.53
UPP2-IT1-201ENST00000439185 PACS2Q86VP3 889 aa11.74□□□□□ -0.53
UPP2-IT1-201ENST00000439185 TSKSQ9UJT2 592 aa11.74□□□□□ -0.53
UPP2-IT1-201ENST00000439185 FAM98CQ17RN3 349 aaKnown RBP11.73□□□□□ -0.53
UPP2-IT1-201ENST00000439185 OSBPP22059 807 aa11.71□□□□□ -0.53
UPP2-IT1-201ENST00000439185 PRSS12P56730 875 aa11.7□□□□□ -0.54
UPP2-IT1-201ENST00000439185 CDCA7LQ96GN5 454 aa11.7□□□□□ -0.54
UPP2-IT1-201ENST00000439185 IFFO2Q5TF58 517 aa11.69□□□□□ -0.54
UPP2-IT1-201ENST00000439185 CERKQ8TCT0 537 aa11.68□□□□□ -0.54
UPP2-IT1-201ENST00000439185 WBP1LQ9NX94 342 aa11.68□□□□□ -0.54
UPP2-IT1-201ENST00000439185 CDHR5Q9HBB8 845 aa11.67□□□□□ -0.54
UPP2-IT1-201ENST00000439185 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.67□□□□□ -0.54
UPP2-IT1-201ENST00000439185 FAM198AQ9UFP1 575 aa11.67□□□□□ -0.54
UPP2-IT1-201ENST00000439185 LRCH3Q96II8 777 aa11.66□□□□□ -0.54
UPP2-IT1-201ENST00000439185 SMAPO00193 183 aa11.65□□□□□ -0.54
UPP2-IT1-201ENST00000439185 NYAP1Q6ZVC0 841 aa11.64□□□□□ -0.55
UPP2-IT1-201ENST00000439185 HPS5Q9UPZ3 1129 aa11.64□□□□□ -0.55
UPP2-IT1-201ENST00000439185 ARHGEF1Q92888 912 aaKnown RBP11.63□□□□□ -0.55
UPP2-IT1-201ENST00000439185 TSR3Q9UJK0 312 aaKnown RBP11.63□□□□□ -0.55
UPP2-IT1-201ENST00000439185 C3orf80F5H4A9 247 aa11.62□□□□□ -0.55
UPP2-IT1-201ENST00000439185 TATDN2Q93075 761 aa11.62□□□□□ -0.55
UPP2-IT1-201ENST00000439185 PNMA3Q9UL41 463 aa11.62□□□□□ -0.55
UPP2-IT1-201ENST00000439185 A0A0G2JS52 829 aa11.61□□□□□ -0.55
UPP2-IT1-201ENST00000439185 KCNV2Q8TDN2 545 aa11.61□□□□□ -0.55
UPP2-IT1-201ENST00000439185 NBPF26B4DH59 902 aa11.6□□□□□ -0.55
UPP2-IT1-201ENST00000439185 ITGBL1O95965 494 aaPredicted RBP11.6□□□□□ -0.55
UPP2-IT1-201ENST00000439185 SAMD7Q7Z3H4 446 aa11.59□□□□□ -0.55
UPP2-IT1-201ENST00000439185 MLLT3P42568 568 aaPredicted RBP11.58□□□□□ -0.56
UPP2-IT1-201ENST00000439185 PPP4CP60510 307 aa11.58□□□□□ -0.56
UPP2-IT1-201ENST00000439185 NPDC1Q9NQX5 325 aaPredicted RBP11.58□□□□□ -0.56
UPP2-IT1-201ENST00000439185 NUDT18Q6ZVK8 323 aa11.57□□□□□ -0.56
UPP2-IT1-201ENST00000439185 RGS20O76081 388 aa11.56□□□□□ -0.56
UPP2-IT1-201ENST00000439185 RBM27Q9P2N5 1060 aaKnown RBP11.56□□□□□ -0.56
UPP2-IT1-201ENST00000439185 KCNC4Q03721 635 aa11.55□□□□□ -0.56
UPP2-IT1-201ENST00000439185 PADI6Q6TGC4 694 aa11.54□□□□□ -0.56
UPP2-IT1-201ENST00000439185 TTC13Q8NBP0 860 aa11.53□□□□□ -0.56
UPP2-IT1-201ENST00000439185 HDGFP51858 240 aaKnown RBP11.52□□□□□ -0.57
UPP2-IT1-201ENST00000439185 RNF40O75150 1001 aa11.48□□□□□ -0.57
UPP2-IT1-201ENST00000439185 P3H3Q8IVL6 736 aa11.47□□□□□ -0.57
UPP2-IT1-201ENST00000439185 PLCB2Q00722 1185 aa11.46□□□□□ -0.57
UPP2-IT1-201ENST00000439185 TJAP1Q5JTD0 557 aa11.45□□□□□ -0.58
UPP2-IT1-201ENST00000439185 SWT1Q5T5J6 900 aaKnown RBP11.45□□□□□ -0.58
UPP2-IT1-201ENST00000439185 EYA1Q99502 592 aa11.45□□□□□ -0.58
UPP2-IT1-201ENST00000439185 NUTM2FA1L443 756 aa11.44□□□□□ -0.58
UPP2-IT1-201ENST00000439185 PTGDRQ13258 359 aa11.44□□□□□ -0.58
UPP2-IT1-201ENST00000439185 SEMA3EO15041 775 aa11.43□□□□□ -0.58
UPP2-IT1-201ENST00000439185 MTRQ99707 1265 aa11.42□□□□□ -0.58
UPP2-IT1-201ENST00000439185 IRX2Q9BZI1 471 aaPredicted RBP11.42□□□□□ -0.58
UPP2-IT1-201ENST00000439185 APLP1P51693 650 aa11.41□□□□□ -0.58
UPP2-IT1-201ENST00000439185 SLF2Q8IX21 1173 aa11.41□□□□□ -0.58
UPP2-IT1-201ENST00000439185 IL21Q9HBE4 155 aa11.4□□□□□ -0.58
UPP2-IT1-201ENST00000439185 NECTIN2Q92692 538 aa11.38□□□□□ -0.59
UPP2-IT1-201ENST00000439185 SLC4A3P48751 1232 aa11.37□□□□□ -0.59
UPP2-IT1-201ENST00000439185 ZNF516Q92618 1163 aa11.37□□□□□ -0.59
UPP2-IT1-201ENST00000439185 RBM46Q8TBY0 533 aaKnown RBP11.36□□□□□ -0.59
UPP2-IT1-201ENST00000439185 ADGRG1Q9Y653 693 aa11.36□□□□□ -0.59
UPP2-IT1-201ENST00000439185 FAM161AQ3B820 660 aa11.35□□□□□ -0.59
UPP2-IT1-201ENST00000439185 FCHSD2O94868 740 aa11.34□□□□□ -0.59
UPP2-IT1-201ENST00000439185 DNAJB2P25686 324 aa11.34□□□□□ -0.59
UPP2-IT1-201ENST00000439185 COPS2P61201 443 aa11.32□□□□□ -0.6
UPP2-IT1-201ENST00000439185 TESPA1A2RU30 521 aaPredicted RBP11.31□□□□□ -0.6
UPP2-IT1-201ENST00000439185 RCCD1A6NED2 376 aa11.31□□□□□ -0.6
UPP2-IT1-201ENST00000439185 HAP1P54257 671 aaPredicted RBP11.31□□□□□ -0.6
UPP2-IT1-201ENST00000439185 PPP1R18Q6NYC8 613 aa11.31□□□□□ -0.6
UPP2-IT1-201ENST00000439185 NKX2-3Q8TAU0 364 aa11.31□□□□□ -0.6
UPP2-IT1-201ENST00000439185 TMEM134Q9H6X4 195 aa11.31□□□□□ -0.6
UPP2-IT1-201ENST00000439185 RBM26Q5T8P6 1007 aaKnown RBP11.3□□□□□ -0.6
UPP2-IT1-201ENST00000439185 SMYD5Q6GMV2 418 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms