RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 ST20-MTHFSA0A0A6YYL1 179 aa16.61■□□□□ 0.25
HDAC8-214ENST00000439122 ROCK2O75116 1388 aaKnown RBP16.61■□□□□ 0.25
HDAC8-214ENST00000439122 RGL3Q3MIN7 710 aa16.61■□□□□ 0.25
HDAC8-214ENST00000439122 ZCCHC11Q5TAX3 1644 aaKnown RBP16.6■□□□□ 0.25
HDAC8-214ENST00000439122 UNC13BO14795 1591 aa16.6■□□□□ 0.25
HDAC8-214ENST00000439122 PLXNC1O60486 1568 aa16.59■□□□□ 0.25
HDAC8-214ENST00000439122 PLCH2O75038 1416 aa16.59■□□□□ 0.25
HDAC8-214ENST00000439122 EFCAB2Q5VUJ9 269 aa16.59■□□□□ 0.25
HDAC8-214ENST00000439122 CLASP1Q7Z460 1538 aa16.59■□□□□ 0.25
HDAC8-214ENST00000439122 ZBED9Q6R2W3 1325 aa16.58■□□□□ 0.24
HDAC8-214ENST00000439122 IRX6P78412 446 aaPredicted RBP16.57■□□□□ 0.24
HDAC8-214ENST00000439122 DUOX2Q9NRD8 1548 aa16.57■□□□□ 0.24
HDAC8-214ENST00000439122 UHRF1BP1LA0JNW5 1464 aa16.57■□□□□ 0.24
HDAC8-214ENST00000439122 PLA2R1Q13018 1463 aa16.56■□□□□ 0.24
HDAC8-214ENST00000439122 PRAG1Q86YV5 1406 aa16.55■□□□□ 0.24
HDAC8-214ENST00000439122 IQGAP3Q86VI3 1631 aa16.55■□□□□ 0.24
HDAC8-214ENST00000439122 ERBINQ96RT1 1412 aa16.54■□□□□ 0.24
HDAC8-214ENST00000439122 TRAPPC8Q9Y2L5 1435 aa16.53■□□□□ 0.24
HDAC8-214ENST00000439122 ABCC1P33527 1531 aa16.52■□□□□ 0.24
HDAC8-214ENST00000439122 TRPM1Q7Z4N2 1603 aa16.52■□□□□ 0.23
HDAC8-214ENST00000439122 NBPF1Q3BBV0 1214 aa16.52■□□□□ 0.23
HDAC8-214ENST00000439122 A2MP01023 1474 aa16.52■□□□□ 0.23
HDAC8-214ENST00000439122 MAGI2Q86UL8 1455 aa16.5■□□□□ 0.23
HDAC8-214ENST00000439122 SPAG9O60271 1321 aaKnown RBP16.5■□□□□ 0.23
HDAC8-214ENST00000439122 TMC1Q8TDI8 760 aa16.5■□□□□ 0.23
HDAC8-214ENST00000439122 AFAP1Q8N556 730 aa16.49■□□□□ 0.23
HDAC8-214ENST00000439122 ATP10AO60312 1499 aa16.47■□□□□ 0.23
HDAC8-214ENST00000439122 PNISRQ8TF01 805 aaKnown RBP16.46■□□□□ 0.23
HDAC8-214ENST00000439122 GPRASP1Q5JY77 1395 aa16.46■□□□□ 0.22
HDAC8-214ENST00000439122 ERICH6BQ5W0A0 696 aa16.45■□□□□ 0.22
HDAC8-214ENST00000439122 RALBP1Q15311 655 aa16.44■□□□□ 0.22
HDAC8-214ENST00000439122 MYBBP1AQ9BQG0 1328 aaKnown RBP16.43■□□□□ 0.22
HDAC8-214ENST00000439122 E9PCH4 1651 aa16.43■□□□□ 0.22
HDAC8-214ENST00000439122 WDR7Q9Y4E6 1490 aa16.43■□□□□ 0.22
HDAC8-214ENST00000439122 KTN1Q86UP2 1357 aaKnown RBP16.43■□□□□ 0.22
HDAC8-214ENST00000439122 ARAP3Q8WWN8 1544 aa16.43■□□□□ 0.22
HDAC8-214ENST00000439122 RTEL1-TNFRSF6BF6WH68 1400 aa16.43■□□□□ 0.22
HDAC8-214ENST00000439122 SENP3-EIF4A1A0A087X0R7 540 aa16.42■□□□□ 0.22
HDAC8-214ENST00000439122 EIF2AK4Q9P2K8 1649 aaKnown RBP16.42■□□□□ 0.22
HDAC8-214ENST00000439122 ZFYVE16Q7Z3T8 1539 aa16.42■□□□□ 0.22
HDAC8-214ENST00000439122 PRDM15P57071 1507 aaPredicted RBP16.42■□□□□ 0.22
HDAC8-214ENST00000439122 PPP4R2Q9NY27 417 aa16.41■□□□□ 0.22
HDAC8-214ENST00000439122 MYT1LQ9UL68 1186 aa16.41■□□□□ 0.22
HDAC8-214ENST00000439122 BRD4O60885 1362 aaPredicted RBP16.4■□□□□ 0.22
HDAC8-214ENST00000439122 TESK2Q96S53 571 aa16.4■□□□□ 0.22
HDAC8-214ENST00000439122 LAMC1P11047 1609 aa16.4■□□□□ 0.22
HDAC8-214ENST00000439122 FANCAO15360 1455 aa16.4■□□□□ 0.22
HDAC8-214ENST00000439122 SMG6Q86US8 1419 aaKnown RBP16.4■□□□□ 0.22
HDAC8-214ENST00000439122 RBM19Q9Y4C8 960 aaKnown RBP16.4■□□□□ 0.22
HDAC8-214ENST00000439122 DISP3Q9P2K9 1392 aa16.39■□□□□ 0.21
HDAC8-214ENST00000439122 COL17A1Q9UMD9 1497 aaPredicted RBP16.39■□□□□ 0.21
HDAC8-214ENST00000439122 NUDCQ9Y266 331 aa16.39■□□□□ 0.21
HDAC8-214ENST00000439122 TMF1P82094 1093 aa16.37■□□□□ 0.21
HDAC8-214ENST00000439122 PER1O15534 1290 aaPredicted RBP16.36■□□□□ 0.21
HDAC8-214ENST00000439122 ATP7AQ04656 1500 aa16.36■□□□□ 0.21
HDAC8-214ENST00000439122 LRPPRCP42704 1394 aaKnown RBP16.36■□□□□ 0.21
HDAC8-214ENST00000439122 NLRP13Q86W25 1043 aa16.36■□□□□ 0.21
HDAC8-214ENST00000439122 ABCA9Q8IUA7 1624 aa16.35■□□□□ 0.21
HDAC8-214ENST00000439122 PARD3Q8TEW0 1356 aa16.35■□□□□ 0.21
HDAC8-214ENST00000439122 KIF3BO15066 747 aa16.35■□□□□ 0.21
HDAC8-214ENST00000439122 TRPM2O94759 1503 aa16.35■□□□□ 0.21
HDAC8-214ENST00000439122 SCAPERQ9BY12 1400 aa16.35■□□□□ 0.21
HDAC8-214ENST00000439122 KANK1Q14678 1352 aa16.35■□□□□ 0.21
HDAC8-214ENST00000439122 ADGRL1O94910 1474 aa16.34■□□□□ 0.21
HDAC8-214ENST00000439122 PANK3Q9H999 370 aa16.34■□□□□ 0.21
HDAC8-214ENST00000439122 DEPDC5O75140 1603 aa16.34■□□□□ 0.21
HDAC8-214ENST00000439122 CC2D1BQ5T0F9 858 aaKnown RBP16.34■□□□□ 0.21
HDAC8-214ENST00000439122 B4GALNT3Q6L9W6 998 aa16.34■□□□□ 0.21
HDAC8-214ENST00000439122 MYT1Q01538 1121 aa16.33■□□□□ 0.2
HDAC8-214ENST00000439122 SPHKAPQ2M3C7 1700 aa16.33■□□□□ 0.2
HDAC8-214ENST00000439122 ASXL2Q76L83 1435 aa16.33■□□□□ 0.2
HDAC8-214ENST00000439122 INO80Q9ULG1 1556 aaPredicted RBP16.33■□□□□ 0.2
HDAC8-214ENST00000439122 RNF17Q9BXT8 1623 aaKnown RBP16.32■□□□□ 0.2
HDAC8-214ENST00000439122 PTPRTO14522 1441 aa16.32■□□□□ 0.2
HDAC8-214ENST00000439122 MADDQ8WXG6 1647 aa16.32■□□□□ 0.2
HDAC8-214ENST00000439122 TET3O43151 1660 aa16.31■□□□□ 0.2
HDAC8-214ENST00000439122 WASHC2CQ9Y4E1 1318 aa16.31■□□□□ 0.2
HDAC8-214ENST00000439122 CLTCL1P53675 1640 aa16.31■□□□□ 0.2
HDAC8-214ENST00000439122 CEP152O94986 1710 aa16.31■□□□□ 0.2
HDAC8-214ENST00000439122 STAC3Q96MF2 364 aa16.29■□□□□ 0.2
HDAC8-214ENST00000439122 SALL2Q9Y467 1007 aaPredicted RBP16.28■□□□□ 0.2
HDAC8-214ENST00000439122 NPM1P06748 294 aaKnown RBP eCLIP16.27■□□□□ 0.2
HDAC8-214ENST00000439122 VWDEQ8N2E2 1590 aa16.27■□□□□ 0.2
HDAC8-214ENST00000439122 RNF123Q5XPI4 1314 aa16.27■□□□□ 0.19
HDAC8-214ENST00000439122 IQGAP1P46940 1657 aa16.25■□□□□ 0.19
HDAC8-214ENST00000439122 SCAF11Q99590 1463 aaKnown RBP16.25■□□□□ 0.19
HDAC8-214ENST00000439122 CDCA8Q53HL2 280 aa16.23■□□□□ 0.19
HDAC8-214ENST00000439122 MROH1Q8NDA8 1641 aa16.23■□□□□ 0.19
HDAC8-214ENST00000439122 OSCARQ8IYS5 282 aa16.23■□□□□ 0.19
HDAC8-214ENST00000439122 KNSTRNQ9Y448 316 aa16.23■□□□□ 0.19
HDAC8-214ENST00000439122 UGGT1Q9NYU2 1555 aa16.22■□□□□ 0.19
HDAC8-214ENST00000439122 KIDINS220Q9ULH0 1771 aa16.22■□□□□ 0.19
HDAC8-214ENST00000439122 ZNF518AQ6AHZ1 1483 aa16.22■□□□□ 0.19
HDAC8-214ENST00000439122 EIF3AQ14152 1382 aaKnown RBP16.21■□□□□ 0.18
HDAC8-214ENST00000439122 CCDC136Q96JN2 1154 aa16.2■□□□□ 0.18
HDAC8-214ENST00000439122 CFAP70Q5T0N1 1121 aa16.19■□□□□ 0.18
HDAC8-214ENST00000439122 EFCAB6Q5THR3 1501 aa16.19■□□□□ 0.18
HDAC8-214ENST00000439122 ANP32EQ9BTT0 268 aa16.19■□□□□ 0.18
HDAC8-214ENST00000439122 PDE3BQ13370 1112 aa16.18■□□□□ 0.18
HDAC8-214ENST00000439122 CD109Q6YHK3 1445 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms