RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 P3H3Q8IVL6 736 aa14.73□□□□□ -0.05
LSMEM1-202ENST00000439068 CFAP43Q8NDM7 1665 aa14.73□□□□□ -0.05
LSMEM1-202ENST00000439068 ARID4BQ4LE39 1312 aaPredicted RBP14.71□□□□□ -0.05
LSMEM1-202ENST00000439068 ABCA8O94911 1581 aa14.7□□□□□ -0.06
LSMEM1-202ENST00000439068 ARAP3Q8WWN8 1544 aa14.7□□□□□ -0.06
LSMEM1-202ENST00000439068 RAPGEF3O95398 923 aa14.68□□□□□ -0.06
LSMEM1-202ENST00000439068 MS4A4AQ96JQ5 239 aa14.68□□□□□ -0.06
LSMEM1-202ENST00000439068 CTTNBP2Q8WZ74 1663 aa14.66□□□□□ -0.06
LSMEM1-202ENST00000439068 ATP10BO94823 1461 aa14.66□□□□□ -0.06
LSMEM1-202ENST00000439068 PRXQ9BXM0 1461 aa14.65□□□□□ -0.06
LSMEM1-202ENST00000439068 EVX2Q03828 476 aa14.65□□□□□ -0.06
LSMEM1-202ENST00000439068 PLEKHD1A6NEE1 506 aa14.64□□□□□ -0.07
LSMEM1-202ENST00000439068 WDR70Q9NW82 654 aa14.63□□□□□ -0.07
LSMEM1-202ENST00000439068 PTPRMP28827 1452 aa14.63□□□□□ -0.07
LSMEM1-202ENST00000439068 GOLGA2Q08379 1002 aa14.62□□□□□ -0.07
LSMEM1-202ENST00000439068 NEO1Q92859 1461 aa14.62□□□□□ -0.07
LSMEM1-202ENST00000439068 HAX1O00165 279 aa14.61□□□□□ -0.07
LSMEM1-202ENST00000439068 KIF21BO75037 1637 aa14.61□□□□□ -0.07
LSMEM1-202ENST00000439068 GALR2O43603 387 aaPredicted RBP14.6□□□□□ -0.07
LSMEM1-202ENST00000439068 TTLL13PA6NNM8 815 aa14.59□□□□□ -0.07
LSMEM1-202ENST00000439068 RANGAP1P46060 587 aaPredicted RBP14.58□□□□□ -0.08
LSMEM1-202ENST00000439068 KCNV2Q8TDN2 545 aa14.58□□□□□ -0.08
LSMEM1-202ENST00000439068 BMP2KQ9NSY1 1161 aaPredicted RBP14.58□□□□□ -0.08
LSMEM1-202ENST00000439068 MKRN3Q13064 507 aaKnown RBP14.57□□□□□ -0.08
LSMEM1-202ENST00000439068 ABCA9Q8IUA7 1624 aa14.56□□□□□ -0.08
LSMEM1-202ENST00000439068 TIE1P35590 1138 aa14.56□□□□□ -0.08
LSMEM1-202ENST00000439068 POGZQ7Z3K3 1410 aa14.55□□□□□ -0.08
LSMEM1-202ENST00000439068 ADAMTSL3P82987 1691 aa14.54□□□□□ -0.08
LSMEM1-202ENST00000439068 DENND4BO75064 1496 aaPredicted RBP14.53□□□□□ -0.08
LSMEM1-202ENST00000439068 AKNAQ7Z591 1439 aa14.51□□□□□ -0.09
LSMEM1-202ENST00000439068 NCKAP5LQ9HCH0 1330 aa14.51□□□□□ -0.09
LSMEM1-202ENST00000439068 RAPGEF6Q8TEU7 1601 aa14.5□□□□□ -0.09
LSMEM1-202ENST00000439068 PCF11O94913 1555 aaKnown RBP14.5□□□□□ -0.09
LSMEM1-202ENST00000439068 HSPA2P54652 639 aa14.49□□□□□ -0.09
LSMEM1-202ENST00000439068 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.49□□□□□ -0.09
LSMEM1-202ENST00000439068 TRIM35Q9UPQ4 493 aa14.49□□□□□ -0.09
LSMEM1-202ENST00000439068 BCORL1Q5H9F3 1711 aa14.49□□□□□ -0.09
LSMEM1-202ENST00000439068 MLECQ14165 292 aa14.48□□□□□ -0.09
LSMEM1-202ENST00000439068 FHOD3Q2V2M9 1422 aa14.48□□□□□ -0.09
LSMEM1-202ENST00000439068 FANCAO15360 1455 aa14.47□□□□□ -0.09
LSMEM1-202ENST00000439068 LMTK3Q96Q04 1460 aa14.47□□□□□ -0.09
LSMEM1-202ENST00000439068 CERKQ8TCT0 537 aa14.47□□□□□ -0.09
LSMEM1-202ENST00000439068 LARP6Q9BRS8 491 aaKnown RBP14.47□□□□□ -0.09
LSMEM1-202ENST00000439068 NUP153P49790 1475 aaKnown RBP14.46□□□□□ -0.09
LSMEM1-202ENST00000439068 SAMD9Q5K651 1589 aa14.46□□□□□ -0.09
LSMEM1-202ENST00000439068 MADDQ8WXG6 1647 aa14.45□□□□□ -0.1
LSMEM1-202ENST00000439068 EEA1Q15075 1411 aa14.45□□□□□ -0.1
LSMEM1-202ENST00000439068 DPY19L2Q6NUT2 758 aa14.45□□□□□ -0.1
LSMEM1-202ENST00000439068 ATP1B4Q9UN42 357 aaPredicted RBP14.45□□□□□ -0.1
LSMEM1-202ENST00000439068 CDK11AQ9UQ88 783 aaPredicted RBP14.45□□□□□ -0.1
LSMEM1-202ENST00000439068 MAGI2Q86UL8 1455 aa14.44□□□□□ -0.1
LSMEM1-202ENST00000439068 E2F4Q16254 413 aa14.43□□□□□ -0.1
LSMEM1-202ENST00000439068 EFCAB2Q5VUJ9 269 aa14.43□□□□□ -0.1
LSMEM1-202ENST00000439068 ATN1P54259 1190 aaPredicted RBP14.42□□□□□ -0.1
LSMEM1-202ENST00000439068 MYT1LQ9UL68 1186 aa14.42□□□□□ -0.1
LSMEM1-202ENST00000439068 CFAP74Q9C0B2 1584 aa14.42□□□□□ -0.1
LSMEM1-202ENST00000439068 ARHGEF40Q8TER5 1519 aa14.41□□□□□ -0.1
LSMEM1-202ENST00000439068 PDE4AP27815 886 aa14.41□□□□□ -0.1
LSMEM1-202ENST00000439068 CRISPLD2Q9H0B8 497 aa14.41□□□□□ -0.1
LSMEM1-202ENST00000439068 FRMPD1Q5SYB0 1578 aa14.41□□□□□ -0.1
LSMEM1-202ENST00000439068 EFCAB5A4FU69 1503 aa14.41□□□□□ -0.1
LSMEM1-202ENST00000439068 SCAPERQ9BY12 1400 aa14.41□□□□□ -0.1
LSMEM1-202ENST00000439068 RIMS1Q86UR5 1692 aaKnown RBP14.39□□□□□ -0.11
LSMEM1-202ENST00000439068 ZFYVE16Q7Z3T8 1539 aa14.39□□□□□ -0.11
LSMEM1-202ENST00000439068 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.38□□□□□ -0.11
LSMEM1-202ENST00000439068 ESF1Q9H501 851 aaKnown RBP14.38□□□□□ -0.11
LSMEM1-202ENST00000439068 PLCH2O75038 1416 aa14.38□□□□□ -0.11
LSMEM1-202ENST00000439068 ATMINO43313 823 aaPredicted RBP14.37□□□□□ -0.11
LSMEM1-202ENST00000439068 UBTFP17480 764 aaKnown RBP14.37□□□□□ -0.11
LSMEM1-202ENST00000439068 YEATS2Q9ULM3 1422 aa14.37□□□□□ -0.11
LSMEM1-202ENST00000439068 ATP10AO60312 1499 aa14.37□□□□□ -0.11
LSMEM1-202ENST00000439068 RICTORQ6R327 1708 aa14.36□□□□□ -0.11
LSMEM1-202ENST00000439068 MFSD10Q14728 455 aa14.36□□□□□ -0.11
LSMEM1-202ENST00000439068 ARHGEF1Q92888 912 aaKnown RBP14.36□□□□□ -0.11
LSMEM1-202ENST00000439068 ZMYM4Q5VZL5 1548 aa14.36□□□□□ -0.11
LSMEM1-202ENST00000439068 CEBPAP49715 358 aaPredicted RBP14.34□□□□□ -0.11
LSMEM1-202ENST00000439068 PDCD7Q8N8D1 485 aaKnown RBP14.33□□□□□ -0.12
LSMEM1-202ENST00000439068 DDX27Q96GQ7 796 aaKnown RBP14.33□□□□□ -0.12
LSMEM1-202ENST00000439068 C9orf84Q5VXU9 1444 aa14.32□□□□□ -0.12
LSMEM1-202ENST00000439068 FMN1Q68DA7 1419 aa14.32□□□□□ -0.12
LSMEM1-202ENST00000439068 HECW1Q76N89 1606 aa14.31□□□□□ -0.12
LSMEM1-202ENST00000439068 CLCN6P51797 869 aa14.31□□□□□ -0.12
LSMEM1-202ENST00000439068 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.31□□□□□ -0.12
LSMEM1-202ENST00000439068 AFAP1Q8N556 730 aa14.31□□□□□ -0.12
LSMEM1-202ENST00000439068 SEMA3EO15041 775 aa14.3□□□□□ -0.12
LSMEM1-202ENST00000439068 GABBR2O75899 941 aa14.3□□□□□ -0.12
LSMEM1-202ENST00000439068 ASTLQ6HA08 431 aaPredicted RBP14.3□□□□□ -0.12
LSMEM1-202ENST00000439068 TTC37Q6PGP7 1564 aa14.3□□□□□ -0.12
LSMEM1-202ENST00000439068 IRX5P78411 483 aaPredicted RBP14.29□□□□□ -0.12
LSMEM1-202ENST00000439068 DISP3Q9P2K9 1392 aa14.29□□□□□ -0.12
LSMEM1-202ENST00000439068 CLIP1P30622 1438 aa14.28□□□□□ -0.12
LSMEM1-202ENST00000439068 CDK13Q14004 1512 aaKnown RBP14.28□□□□□ -0.12
LSMEM1-202ENST00000439068 ZNF518AQ6AHZ1 1483 aa14.28□□□□□ -0.12
LSMEM1-202ENST00000439068 UHRF1BP1Q6BDS2 1440 aa14.28□□□□□ -0.12
LSMEM1-202ENST00000439068 MICALL2Q8IY33 904 aa14.28□□□□□ -0.12
LSMEM1-202ENST00000439068 LMOD2Q6P5Q4 547 aa14.27□□□□□ -0.13
LSMEM1-202ENST00000439068 FER1L4A9Z1Z3 1794 aa14.27□□□□□ -0.13
LSMEM1-202ENST00000439068 ARHGEF12Q9NZN5 1544 aa14.26□□□□□ -0.13
LSMEM1-202ENST00000439068 SETD1BQ9UPS6 1966 aaKnown RBP14.25□□□□□ -0.13
LSMEM1-202ENST00000439068 OCEL1Q9H607 264 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms