RNA–Protein interactions for RNA: ENST00000438826.7

TVP23C-204, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-204ENST00000438826 ATP10AO60312 1499 aa24.42■■□□□ 1.5
TVP23C-204ENST00000438826 DHX29Q7Z478 1369 aaKnown RBP24.41■■□□□ 1.5
TVP23C-204ENST00000438826 ZNF326Q5BKZ1 582 aaKnown RBP24.41■■□□□ 1.5
TVP23C-204ENST00000438826 SPATA31E1Q6ZUB1 1445 aa24.41■■□□□ 1.5
TVP23C-204ENST00000438826 RIMBP3CA6NJZ7 1639 aa24.41■■□□□ 1.5
TVP23C-204ENST00000438826 RIMBP3BA6NNM3 1639 aa24.41■■□□□ 1.5
TVP23C-204ENST00000438826 RIMBP3Q9UFD9 1639 aa24.41■■□□□ 1.5
TVP23C-204ENST00000438826 DEPDC5O75140 1603 aa24.4■■□□□ 1.5
TVP23C-204ENST00000438826 WASHC2AQ641Q2 1341 aa24.39■■□□□ 1.5
TVP23C-204ENST00000438826 POGZQ7Z3K3 1410 aa24.39■■□□□ 1.5
TVP23C-204ENST00000438826 DCAF11Q8TEB1 546 aa24.38■■□□□ 1.49
TVP23C-204ENST00000438826 KIDINS220Q9ULH0 1771 aa24.37■■□□□ 1.49
TVP23C-204ENST00000438826 EIF2AK4Q9P2K8 1649 aaKnown RBP24.37■■□□□ 1.49
TVP23C-204ENST00000438826 NEO1Q92859 1461 aa24.37■■□□□ 1.49
TVP23C-204ENST00000438826 KANK1Q14678 1352 aa24.36■■□□□ 1.49
TVP23C-204ENST00000438826 RALGAPBQ86X10 1494 aa24.36■■□□□ 1.49
TVP23C-204ENST00000438826 KIF3BO15066 747 aa24.36■■□□□ 1.49
TVP23C-204ENST00000438826 KDM2AQ9Y2K7 1162 aa24.36■■□□□ 1.49
TVP23C-204ENST00000438826 KDM5CP41229 1560 aa24.35■■□□□ 1.49
TVP23C-204ENST00000438826 ANP32CO43423 234 aa24.34■■□□□ 1.49
TVP23C-204ENST00000438826 MLH3Q9UHC1 1453 aa24.33■■□□□ 1.49
TVP23C-204ENST00000438826 VWDEQ8N2E2 1590 aa24.33■■□□□ 1.48
TVP23C-204ENST00000438826 USP47Q96K76 1375 aa24.31■■□□□ 1.48
TVP23C-204ENST00000438826 E9PCH4 1651 aa24.31■■□□□ 1.48
TVP23C-204ENST00000438826 PRDM15P57071 1507 aaPredicted RBP24.3■■□□□ 1.48
TVP23C-204ENST00000438826 CCDC7Q96M83 1385 aa24.3■■□□□ 1.48
TVP23C-204ENST00000438826 A2MP01023 1474 aa24.3■■□□□ 1.48
TVP23C-204ENST00000438826 TET3O43151 1660 aa24.3■■□□□ 1.48
TVP23C-204ENST00000438826 C11orf95C9JLR9 678 aaPredicted RBP24.3■■□□□ 1.48
TVP23C-204ENST00000438826 RGL3Q3MIN7 710 aa24.29■■□□□ 1.48
TVP23C-204ENST00000438826 GLI2P10070 1586 aa24.29■■□□□ 1.48
TVP23C-204ENST00000438826 MAP3K4Q9Y6R4 1608 aa24.29■■□□□ 1.48
TVP23C-204ENST00000438826 HECW2Q9P2P5 1572 aa24.28■■□□□ 1.48
TVP23C-204ENST00000438826 PTPRTO14522 1441 aa24.27■■□□□ 1.48
TVP23C-204ENST00000438826 CARD11Q9BXL7 1154 aa24.27■■□□□ 1.48
TVP23C-204ENST00000438826 MROH1Q8NDA8 1641 aa24.27■■□□□ 1.48
TVP23C-204ENST00000438826 PRAG1Q86YV5 1406 aa24.26■■□□□ 1.47
TVP23C-204ENST00000438826 TRPM2O94759 1503 aa24.26■■□□□ 1.47
TVP23C-204ENST00000438826 CCER2I3L3R5 266 aa24.26■■□□□ 1.47
TVP23C-204ENST00000438826 SCAF1Q9H7N4 1312 aaKnown RBP24.24■■□□□ 1.47
TVP23C-204ENST00000438826 KIF7Q2M1P5 1343 aa24.23■■□□□ 1.47
TVP23C-204ENST00000438826 RAPGEF3O95398 923 aa24.23■■□□□ 1.47
TVP23C-204ENST00000438826 CNTLNQ9NXG0 1405 aa24.22■■□□□ 1.47
TVP23C-204ENST00000438826 POLR1AO95602 1720 aaPredicted RBP24.22■■□□□ 1.47
TVP23C-204ENST00000438826 SPHKAPQ2M3C7 1700 aa24.22■■□□□ 1.47
TVP23C-204ENST00000438826 ROCK2O75116 1388 aaKnown RBP24.22■■□□□ 1.47
TVP23C-204ENST00000438826 RNF17Q9BXT8 1623 aaKnown RBP24.21■■□□□ 1.47
TVP23C-204ENST00000438826 FRMPD1Q5SYB0 1578 aa24.19■■□□□ 1.46
TVP23C-204ENST00000438826 FAM69CQ0P6D2 419 aa24.19■■□□□ 1.46
TVP23C-204ENST00000438826 TRPM1Q7Z4N2 1603 aa24.19■■□□□ 1.46
TVP23C-204ENST00000438826 LMTK2Q8IWU2 1503 aa24.19■■□□□ 1.46
TVP23C-204ENST00000438826 ABCA6Q8N139 1617 aa24.17■■□□□ 1.46
TVP23C-204ENST00000438826 ARID4BQ4LE39 1312 aaPredicted RBP24.17■■□□□ 1.46
TVP23C-204ENST00000438826 EFCAB6Q5THR3 1501 aa24.16■■□□□ 1.46
TVP23C-204ENST00000438826 DIP2BQ9P265 1576 aa24.16■■□□□ 1.46
TVP23C-204ENST00000438826 BCORL1Q5H9F3 1711 aa24.15■■□□□ 1.46
TVP23C-204ENST00000438826 RICTORQ6R327 1708 aa24.15■■□□□ 1.46
TVP23C-204ENST00000438826 CLTCL1P53675 1640 aa24.15■■□□□ 1.46
TVP23C-204ENST00000438826 CEP152O94986 1710 aa24.15■■□□□ 1.46
TVP23C-204ENST00000438826 GPRASP1Q5JY77 1395 aa24.14■■□□□ 1.45
TVP23C-204ENST00000438826 STAC3Q96MF2 364 aa24.13■■□□□ 1.45
TVP23C-204ENST00000438826 ST20-MTHFSA0A0A6YYL1 179 aa24.12■■□□□ 1.45
TVP23C-204ENST00000438826 PPRC1Q5VV67 1664 aaKnown RBP24.12■■□□□ 1.45
TVP23C-204ENST00000438826 GGT6Q6P531 493 aa24.11■■□□□ 1.45
TVP23C-204ENST00000438826 NBPF1Q3BBV0 1214 aa24.11■■□□□ 1.45
TVP23C-204ENST00000438826 DIP2CQ9Y2E4 1556 aa24.11■■□□□ 1.45
TVP23C-204ENST00000438826 LAMC1P11047 1609 aa24.09■■□□□ 1.45
TVP23C-204ENST00000438826 NEURL4Q96JN8 1562 aa24.09■■□□□ 1.45
TVP23C-204ENST00000438826 GTF3C3Q9Y5Q9 886 aa24.08■■□□□ 1.45
TVP23C-204ENST00000438826 WASHC2CQ9Y4E1 1318 aa24.05■■□□□ 1.44
TVP23C-204ENST00000438826 NPATQ14207 1427 aa24.03■■□□□ 1.44
TVP23C-204ENST00000438826 YEATS2Q9ULM3 1422 aa24.03■■□□□ 1.44
TVP23C-204ENST00000438826 ABCC3O15438 1527 aa24.03■■□□□ 1.44
TVP23C-204ENST00000438826 POLR3GLQ9BT43 218 aa24.03■■□□□ 1.44
TVP23C-204ENST00000438826 MADDQ8WXG6 1647 aa24.03■■□□□ 1.44
TVP23C-204ENST00000438826 ZMYM4Q5VZL5 1548 aa24.02■■□□□ 1.44
TVP23C-204ENST00000438826 PRKRIP1Q9H875 184 aaPredicted RBP24.02■■□□□ 1.44
TVP23C-204ENST00000438826 UGGT1Q9NYU2 1555 aa24.02■■□□□ 1.44
TVP23C-204ENST00000438826 TSPOAP1O95153 1857 aa23.99■■□□□ 1.43
TVP23C-204ENST00000438826 KIF1BO60333 1816 aa23.99■■□□□ 1.43
TVP23C-204ENST00000438826 CAMSAP1Q5T5Y3 1602 aa23.95■■□□□ 1.42
TVP23C-204ENST00000438826 MYOM2P54296 1465 aa23.95■■□□□ 1.42
TVP23C-204ENST00000438826 TESK2Q96S53 571 aa23.93■■□□□ 1.42
TVP23C-204ENST00000438826 ZC3H13Q5T200 1668 aaKnown RBP23.92■■□□□ 1.42
TVP23C-204ENST00000438826 ADGRB3O60242 1522 aa23.92■■□□□ 1.42
TVP23C-204ENST00000438826 ARHGAP31Q2M1Z3 1444 aa23.92■■□□□ 1.42
TVP23C-204ENST00000438826 NOS1P29475 1434 aa23.9■■□□□ 1.42
TVP23C-204ENST00000438826 KIAA1210Q9ULL0 1709 aa23.89■■□□□ 1.42
TVP23C-204ENST00000438826 COL17A1Q9UMD9 1497 aaPredicted RBP23.89■■□□□ 1.41
TVP23C-204ENST00000438826 MROH2AA6NES4 1674 aa23.89■■□□□ 1.41
TVP23C-204ENST00000438826 CFAP65Q6ZU64 1925 aaKnown RBP23.88■■□□□ 1.41
TVP23C-204ENST00000438826 SCAF11Q99590 1463 aaKnown RBP23.88■■□□□ 1.41
TVP23C-204ENST00000438826 CHGAP10645 457 aaKnown RBP23.87■■□□□ 1.41
TVP23C-204ENST00000438826 IFT172Q9UG01 1749 aa23.87■■□□□ 1.41
TVP23C-204ENST00000438826 IQGAP1P46940 1657 aa23.87■■□□□ 1.41
TVP23C-204ENST00000438826 KIF13AQ9H1H9 1805 aa23.87■■□□□ 1.41
TVP23C-204ENST00000438826 TMF1P82094 1093 aa23.87■■□□□ 1.41
TVP23C-204ENST00000438826 ADGRF5Q8IZF2 1346 aa23.86■■□□□ 1.41
TVP23C-204ENST00000438826 REREQ9P2R6 1566 aa23.86■■□□□ 1.41
TVP23C-204ENST00000438826 NRXN1Q9ULB1 1477 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms