RNA–Protein interactions for RNA: ENST00000438345.1

SDR42E1P3-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1 pseudogene 3, humanhuman

BASIC

Gene SDR42E1P3, Length 502 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1P3-201ENST00000438345 HRO43593 1189 aa15.57■□□□□ 0.08
SDR42E1P3-201ENST00000438345 VPS9D1Q9Y2B5 631 aa15.56■□□□□ 0.08
SDR42E1P3-201ENST00000438345 EPAS1Q99814 870 aa15.55■□□□□ 0.08
SDR42E1P3-201ENST00000438345 SLC4A5Q9BY07 1137 aa15.54■□□□□ 0.08
SDR42E1P3-201ENST00000438345 ZBED2Q9BTP6 218 aa15.52■□□□□ 0.08
SDR42E1P3-201ENST00000438345 ARHGEF1Q92888 912 aaKnown RBP15.5■□□□□ 0.07
SDR42E1P3-201ENST00000438345 PPP1R3GB7ZBB8 358 aa15.49■□□□□ 0.07
SDR42E1P3-201ENST00000438345 GRXCR2A6NFK2 248 aa15.48■□□□□ 0.07
SDR42E1P3-201ENST00000438345 COL9A1P20849 921 aa15.47■□□□□ 0.07
SDR42E1P3-201ENST00000438345 RBM33Q96EV2 1170 aaKnown RBP15.47■□□□□ 0.07
SDR42E1P3-201ENST00000438345 NBR1Q14596 966 aa15.46■□□□□ 0.07
SDR42E1P3-201ENST00000438345 C6orf132Q5T0Z8 1188 aa15.46■□□□□ 0.07
SDR42E1P3-201ENST00000438345 VSIG10Q8N0Z9 540 aa15.46■□□□□ 0.07
SDR42E1P3-201ENST00000438345 STAC3Q96MF2 364 aa15.46■□□□□ 0.07
SDR42E1P3-201ENST00000438345 PRIM1P49642 420 aaKnown RBP15.45■□□□□ 0.06
SDR42E1P3-201ENST00000438345 P3H3Q8IVL6 736 aa15.44■□□□□ 0.06
SDR42E1P3-201ENST00000438345 BHMG1C9JSJ3 638 aaPredicted RBP15.42■□□□□ 0.06
SDR42E1P3-201ENST00000438345 MLLT3P42568 568 aaPredicted RBP15.42■□□□□ 0.06
SDR42E1P3-201ENST00000438345 EN1Q05925 392 aaPredicted RBP15.42■□□□□ 0.06
SDR42E1P3-201ENST00000438345 PROX2Q3B8N5 592 aa15.4■□□□□ 0.06
SDR42E1P3-201ENST00000438345 MAP3K7O43318 606 aa15.38■□□□□ 0.05
SDR42E1P3-201ENST00000438345 OSBPP22059 807 aa15.38■□□□□ 0.05
SDR42E1P3-201ENST00000438345 TSR1Q2NL82 804 aaKnown RBP15.38■□□□□ 0.05
SDR42E1P3-201ENST00000438345 SEMA3EO15041 775 aa15.37■□□□□ 0.05
SDR42E1P3-201ENST00000438345 KCTD12Q96CX2 325 aaKnown RBP15.36■□□□□ 0.05
SDR42E1P3-201ENST00000438345 NBPF3Q9H094 633 aa15.35■□□□□ 0.05
SDR42E1P3-201ENST00000438345 RABGEF1Q9UJ41 708 aa15.35■□□□□ 0.05
SDR42E1P3-201ENST00000438345 MRPL50Q8N5N7 158 aaKnown RBP15.34■□□□□ 0.05
SDR42E1P3-201ENST00000438345 HCSTQ9UBK5 93 aa15.33■□□□□ 0.04
SDR42E1P3-201ENST00000438345 ONECUT3O60422 494 aaPredicted RBP15.29■□□□□ 0.04
SDR42E1P3-201ENST00000438345 CDHR5Q9HBB8 845 aa15.29■□□□□ 0.04
SDR42E1P3-201ENST00000438345 KIAA1468Q9P260 1216 aa15.29■□□□□ 0.04
SDR42E1P3-201ENST00000438345 GOLGA8CPA6NN73 597 aa15.28■□□□□ 0.04
SDR42E1P3-201ENST00000438345 TRIM6-TRIM34B2RNG4 842 aa15.28■□□□□ 0.04
SDR42E1P3-201ENST00000438345 WNT2BQ93097 391 aa15.25■□□□□ 0.03
SDR42E1P3-201ENST00000438345 THSD4Q6ZMP0 1018 aa15.22■□□□□ 0.03
SDR42E1P3-201ENST00000438345 LAPTM4BQ86VI4 370 aa15.22■□□□□ 0.03
SDR42E1P3-201ENST00000438345 CERKQ8TCT0 537 aa15.22■□□□□ 0.03
SDR42E1P3-201ENST00000438345 TSKSQ9UJT2 592 aa15.22■□□□□ 0.03
SDR42E1P3-201ENST00000438345 TESPA1A2RU30 521 aaPredicted RBP15.21■□□□□ 0.03
SDR42E1P3-201ENST00000438345 CDCA7LQ96GN5 454 aa15.2■□□□□ 0.02
SDR42E1P3-201ENST00000438345 SEPT9Q9UHD8 586 aaPredicted RBP15.2■□□□□ 0.02
SDR42E1P3-201ENST00000438345 PTPN5P54829 565 aa15.19■□□□□ 0.02
SDR42E1P3-201ENST00000438345 PRSS12P56730 875 aa15.19■□□□□ 0.02
SDR42E1P3-201ENST00000438345 PACS2Q86VP3 889 aa15.18■□□□□ 0.02
SDR42E1P3-201ENST00000438345 NPDC1Q9NQX5 325 aaPredicted RBP15.18■□□□□ 0.02
SDR42E1P3-201ENST00000438345 ANKK1Q8NFD2 765 aa15.16■□□□□ 0.02
SDR42E1P3-201ENST00000438345 FAM198AQ9UFP1 575 aa15.16■□□□□ 0.02
SDR42E1P3-201ENST00000438345 ZFRQ96KR1 1074 aaKnown RBP15.15■□□□□ 0.02
SDR42E1P3-201ENST00000438345 FAM98CQ17RN3 349 aaKnown RBP15.14■□□□□ 0.01
SDR42E1P3-201ENST00000438345 RBM26Q5T8P6 1007 aaKnown RBP15.13■□□□□ 0.01
SDR42E1P3-201ENST00000438345 NUTM2FA1L443 756 aa15.11■□□□□ 0.01
SDR42E1P3-201ENST00000438345 C3orf80F5H4A9 247 aa15.11■□□□□ 0.01
SDR42E1P3-201ENST00000438345 RBM27Q9P2N5 1060 aaKnown RBP15.11■□□□□ 0.01
SDR42E1P3-201ENST00000438345 BCAMP50895 628 aa15.1■□□□□ 0.01
SDR42E1P3-201ENST00000438345 PLA2G2EQ9NZK7 142 aa15.1■□□□□ 0.01
SDR42E1P3-201ENST00000438345 SOWAHBA6NEL2 793 aa15.08■□□□□ 0
SDR42E1P3-201ENST00000438345 SMAPO00193 183 aa15.08■□□□□ 0
SDR42E1P3-201ENST00000438345 NBPF26B4DH59 902 aa15.06■□□□□ 0
SDR42E1P3-201ENST00000438345 PTGDRQ13258 359 aa15.06■□□□□ 0
SDR42E1P3-201ENST00000438345 PADI6Q6TGC4 694 aa15.06■□□□□ 0
SDR42E1P3-201ENST00000438345 TTC13Q8NBP0 860 aa15.06■□□□□ 0
SDR42E1P3-201ENST00000438345 TATDN2Q93075 761 aa15.06■□□□□ 0
SDR42E1P3-201ENST00000438345 SMYD5Q6GMV2 418 aa15.05■□□□□ -0
SDR42E1P3-201ENST00000438345 PNMA3Q9UL41 463 aa15.04■□□□□ -0
SDR42E1P3-201ENST00000438345 LRCH3Q96II8 777 aa15.02■□□□□ -0
SDR42E1P3-201ENST00000438345 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.02■□□□□ -0
SDR42E1P3-201ENST00000438345 NUDT18Q6ZVK8 323 aa15.01□□□□□ -0.01
SDR42E1P3-201ENST00000438345 WBP1LQ9NX94 342 aa14.98□□□□□ -0.01
SDR42E1P3-201ENST00000438345 SAMD7Q7Z3H4 446 aa14.97□□□□□ -0.01
SDR42E1P3-201ENST00000438345 HPS5Q9UPZ3 1129 aa14.97□□□□□ -0.01
SDR42E1P3-201ENST00000438345 FCHSD2O94868 740 aa14.96□□□□□ -0.01
SDR42E1P3-201ENST00000438345 TSR3Q9UJK0 312 aaKnown RBP14.96□□□□□ -0.01
SDR42E1P3-201ENST00000438345 GPR37O15354 613 aa14.95□□□□□ -0.02
SDR42E1P3-201ENST00000438345 SLC24A1O60721 1099 aa14.95□□□□□ -0.02
SDR42E1P3-201ENST00000438345 FAM161AQ3B820 660 aa14.95□□□□□ -0.02
SDR42E1P3-201ENST00000438345 NYAP1Q6ZVC0 841 aa14.94□□□□□ -0.02
SDR42E1P3-201ENST00000438345 FECHP22830 423 aa14.93□□□□□ -0.02
SDR42E1P3-201ENST00000438345 EYA1Q99502 592 aa14.9□□□□□ -0.02
SDR42E1P3-201ENST00000438345 GPIHBP1Q8IV16 184 aa14.89□□□□□ -0.03
SDR42E1P3-201ENST00000438345 PPP4CP60510 307 aa14.88□□□□□ -0.03
SDR42E1P3-201ENST00000438345 HIC1Q14526 733 aa14.88□□□□□ -0.03
SDR42E1P3-201ENST00000438345 IFFO2Q5TF58 517 aa14.88□□□□□ -0.03
SDR42E1P3-201ENST00000438345 HDGFP51858 240 aaKnown RBP14.87□□□□□ -0.03
SDR42E1P3-201ENST00000438345 ADGRG1Q9Y653 693 aa14.87□□□□□ -0.03
SDR42E1P3-201ENST00000438345 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.86□□□□□ -0.03
SDR42E1P3-201ENST00000438345 GNPATO15228 680 aa14.85□□□□□ -0.03
SDR42E1P3-201ENST00000438345 ITGBL1O95965 494 aaPredicted RBP14.85□□□□□ -0.03
SDR42E1P3-201ENST00000438345 SWT1Q5T5J6 900 aaKnown RBP14.84□□□□□ -0.03
SDR42E1P3-201ENST00000438345 TULP1O00294 542 aaPredicted RBP14.83□□□□□ -0.04
SDR42E1P3-201ENST00000438345 RNF40O75150 1001 aa14.82□□□□□ -0.04
SDR42E1P3-201ENST00000438345 RBM46Q8TBY0 533 aaKnown RBP14.82□□□□□ -0.04
SDR42E1P3-201ENST00000438345 LMOD2Q6P5Q4 547 aa14.8□□□□□ -0.04
SDR42E1P3-201ENST00000438345 DNAJB2P25686 324 aa14.78□□□□□ -0.04
SDR42E1P3-201ENST00000438345 SLF2Q8IX21 1173 aa14.78□□□□□ -0.04
SDR42E1P3-201ENST00000438345 A0A0G2JS52 829 aa14.75□□□□□ -0.05
SDR42E1P3-201ENST00000438345 RCCD1A6NED2 376 aa14.75□□□□□ -0.05
SDR42E1P3-201ENST00000438345 PXYLP1Q8TE99 480 aa14.75□□□□□ -0.05
SDR42E1P3-201ENST00000438345 TMEM134Q9H6X4 195 aa14.75□□□□□ -0.05
SDR42E1P3-201ENST00000438345 KCNC4Q03721 635 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms