RNA–Protein interactions for RNA: ENST00000437167.1

RGPD6-203, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 1 (best)

Gene RGPD6, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-203ENST00000437167 RBM33Q96EV2 1170 aaKnown RBP12.36□□□□□ -0.43
RGPD6-203ENST00000437167 PPP1R3GB7ZBB8 358 aa12.35□□□□□ -0.43
RGPD6-203ENST00000437167 PTPN5P54829 565 aa12.35□□□□□ -0.43
RGPD6-203ENST00000437167 EPAS1Q99814 870 aa12.35□□□□□ -0.43
RGPD6-203ENST00000437167 E2F4Q16254 413 aa12.34□□□□□ -0.43
RGPD6-203ENST00000437167 NBPF3Q9H094 633 aa12.34□□□□□ -0.43
RGPD6-203ENST00000437167 COL9A1P20849 921 aa12.33□□□□□ -0.44
RGPD6-203ENST00000437167 PROX2Q3B8N5 592 aa12.33□□□□□ -0.44
RGPD6-203ENST00000437167 PLA2G2EQ9NZK7 142 aa12.32□□□□□ -0.44
RGPD6-203ENST00000437167 BHMG1C9JSJ3 638 aaPredicted RBP12.31□□□□□ -0.44
RGPD6-203ENST00000437167 WNT2BQ93097 391 aa12.31□□□□□ -0.44
RGPD6-203ENST00000437167 NBR1Q14596 966 aa12.3□□□□□ -0.44
RGPD6-203ENST00000437167 C6orf132Q5T0Z8 1188 aa12.3□□□□□ -0.44
RGPD6-203ENST00000437167 SPDYE16A6NNV3 312 aaPredicted RBP12.28□□□□□ -0.44
RGPD6-203ENST00000437167 PDIA6Q15084 440 aa12.28□□□□□ -0.44
RGPD6-203ENST00000437167 MAP3K7O43318 606 aa12.26□□□□□ -0.45
RGPD6-203ENST00000437167 PLCB2Q00722 1185 aa12.26□□□□□ -0.45
RGPD6-203ENST00000437167 RABGEF1Q9UJ41 708 aa12.26□□□□□ -0.45
RGPD6-203ENST00000437167 THSD4Q6ZMP0 1018 aa12.25□□□□□ -0.45
RGPD6-203ENST00000437167 GRXCR2A6NFK2 248 aa12.24□□□□□ -0.45
RGPD6-203ENST00000437167 KIAA1468Q9P260 1216 aa12.24□□□□□ -0.45
RGPD6-203ENST00000437167 TSHZ2Q9NRE2 1034 aa12.22□□□□□ -0.45
RGPD6-203ENST00000437167 EN1Q05925 392 aaPredicted RBP12.21□□□□□ -0.45
RGPD6-203ENST00000437167 TSR1Q2NL82 804 aaKnown RBP12.21□□□□□ -0.45
RGPD6-203ENST00000437167 ANKK1Q8NFD2 765 aa12.21□□□□□ -0.45
RGPD6-203ENST00000437167 SEPT9Q9UHD8 586 aaPredicted RBP12.2□□□□□ -0.46
RGPD6-203ENST00000437167 TRIM6-TRIM34B2RNG4 842 aa12.18□□□□□ -0.46
RGPD6-203ENST00000437167 LAPTM4BQ86VI4 370 aa12.16□□□□□ -0.46
RGPD6-203ENST00000437167 ARIH1Q9Y4X5 557 aaPredicted RBP12.16□□□□□ -0.46
RGPD6-203ENST00000437167 ONECUT3O60422 494 aaPredicted RBP12.15□□□□□ -0.46
RGPD6-203ENST00000437167 BCAMP50895 628 aa12.15□□□□□ -0.46
RGPD6-203ENST00000437167 ZFRQ96KR1 1074 aaKnown RBP12.14□□□□□ -0.47
RGPD6-203ENST00000437167 PACS2Q86VP3 889 aa12.13□□□□□ -0.47
RGPD6-203ENST00000437167 PRIM1P49642 420 aaKnown RBP12.1□□□□□ -0.47
RGPD6-203ENST00000437167 FAM98CQ17RN3 349 aaKnown RBP12.1□□□□□ -0.47
RGPD6-203ENST00000437167 TSKSQ9UJT2 592 aa12.1□□□□□ -0.47
RGPD6-203ENST00000437167 SOWAHBA6NEL2 793 aa12.09□□□□□ -0.47
RGPD6-203ENST00000437167 CDCA7LQ96GN5 454 aa12.09□□□□□ -0.47
RGPD6-203ENST00000437167 OSBPP22059 807 aa12.08□□□□□ -0.48
RGPD6-203ENST00000437167 CERKQ8TCT0 537 aa12.08□□□□□ -0.48
RGPD6-203ENST00000437167 PRSS12P56730 875 aa12.07□□□□□ -0.48
RGPD6-203ENST00000437167 CDHR5Q9HBB8 845 aa12.07□□□□□ -0.48
RGPD6-203ENST00000437167 SMAPO00193 183 aa12.06□□□□□ -0.48
RGPD6-203ENST00000437167 LRCH3Q96II8 777 aa12.06□□□□□ -0.48
RGPD6-203ENST00000437167 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.06□□□□□ -0.48
RGPD6-203ENST00000437167 KCNV2Q8TDN2 545 aa12.04□□□□□ -0.48
RGPD6-203ENST00000437167 WBP1LQ9NX94 342 aa12.04□□□□□ -0.48
RGPD6-203ENST00000437167 ARHGEF1Q92888 912 aaKnown RBP12.03□□□□□ -0.48
RGPD6-203ENST00000437167 PNMA3Q9UL41 463 aa12.03□□□□□ -0.48
RGPD6-203ENST00000437167 HPS5Q9UPZ3 1129 aa12.03□□□□□ -0.48
RGPD6-203ENST00000437167 FAM198AQ9UFP1 575 aa12.02□□□□□ -0.49
RGPD6-203ENST00000437167 NBPF26B4DH59 902 aa12.01□□□□□ -0.49
RGPD6-203ENST00000437167 HAP1P54257 671 aaPredicted RBP12□□□□□ -0.49
RGPD6-203ENST00000437167 TSR3Q9UJK0 312 aaKnown RBP12□□□□□ -0.49
RGPD6-203ENST00000437167 MLLT3P42568 568 aaPredicted RBP11.99□□□□□ -0.49
RGPD6-203ENST00000437167 TATDN2Q93075 761 aa11.99□□□□□ -0.49
RGPD6-203ENST00000437167 NYAP1Q6ZVC0 841 aa11.98□□□□□ -0.49
RGPD6-203ENST00000437167 PPP4CP60510 307 aa11.97□□□□□ -0.49
RGPD6-203ENST00000437167 NUDT18Q6ZVK8 323 aa11.97□□□□□ -0.49
RGPD6-203ENST00000437167 SAMD7Q7Z3H4 446 aa11.97□□□□□ -0.49
RGPD6-203ENST00000437167 SLC24A1O60721 1099 aa11.96□□□□□ -0.49
RGPD6-203ENST00000437167 RNF40O75150 1001 aa11.96□□□□□ -0.49
RGPD6-203ENST00000437167 HDGFP51858 240 aaKnown RBP11.96□□□□□ -0.49
RGPD6-203ENST00000437167 IFFO2Q5TF58 517 aa11.96□□□□□ -0.49
RGPD6-203ENST00000437167 C3orf80F5H4A9 247 aa11.95□□□□□ -0.5
RGPD6-203ENST00000437167 P3H3Q8IVL6 736 aa11.95□□□□□ -0.5
RGPD6-203ENST00000437167 PADI6Q6TGC4 694 aa11.94□□□□□ -0.5
RGPD6-203ENST00000437167 A0A0G2JS52 829 aa11.93□□□□□ -0.5
RGPD6-203ENST00000437167 RBM27Q9P2N5 1060 aaKnown RBP11.93□□□□□ -0.5
RGPD6-203ENST00000437167 NPDC1Q9NQX5 325 aaPredicted RBP11.92□□□□□ -0.5
RGPD6-203ENST00000437167 ITGBL1O95965 494 aaPredicted RBP11.91□□□□□ -0.5
RGPD6-203ENST00000437167 KCNC4Q03721 635 aa11.91□□□□□ -0.5
RGPD6-203ENST00000437167 VSIG10Q8N0Z9 540 aa11.91□□□□□ -0.5
RGPD6-203ENST00000437167 KDM2AQ9Y2K7 1162 aa11.91□□□□□ -0.5
RGPD6-203ENST00000437167 NUTM2FA1L443 756 aa11.89□□□□□ -0.51
RGPD6-203ENST00000437167 SEMA3EO15041 775 aa11.86□□□□□ -0.51
RGPD6-203ENST00000437167 RGS20O76081 388 aa11.84□□□□□ -0.51
RGPD6-203ENST00000437167 SWT1Q5T5J6 900 aaKnown RBP11.84□□□□□ -0.51
RGPD6-203ENST00000437167 TTC13Q8NBP0 860 aa11.84□□□□□ -0.51
RGPD6-203ENST00000437167 SLC4A3P48751 1232 aa11.82□□□□□ -0.52
RGPD6-203ENST00000437167 PTGDRQ13258 359 aa11.82□□□□□ -0.52
RGPD6-203ENST00000437167 SLF2Q8IX21 1173 aa11.81□□□□□ -0.52
RGPD6-203ENST00000437167 NECTIN2Q92692 538 aa11.78□□□□□ -0.52
RGPD6-203ENST00000437167 EYA1Q99502 592 aa11.78□□□□□ -0.52
RGPD6-203ENST00000437167 MTRQ99707 1265 aa11.78□□□□□ -0.52
RGPD6-203ENST00000437167 APLP1P51693 650 aa11.77□□□□□ -0.53
RGPD6-203ENST00000437167 RBM46Q8TBY0 533 aaKnown RBP11.77□□□□□ -0.53
RGPD6-203ENST00000437167 FCHSD2O94868 740 aa11.76□□□□□ -0.53
RGPD6-203ENST00000437167 FAM161AQ3B820 660 aa11.76□□□□□ -0.53
RGPD6-203ENST00000437167 TJAP1Q5JTD0 557 aa11.76□□□□□ -0.53
RGPD6-203ENST00000437167 IRX2Q9BZI1 471 aaPredicted RBP11.76□□□□□ -0.53
RGPD6-203ENST00000437167 IL21Q9HBE4 155 aa11.76□□□□□ -0.53
RGPD6-203ENST00000437167 DNAJB2P25686 324 aa11.74□□□□□ -0.53
RGPD6-203ENST00000437167 SMYD5Q6GMV2 418 aa11.74□□□□□ -0.53
RGPD6-203ENST00000437167 ADGRG1Q9Y653 693 aa11.73□□□□□ -0.53
RGPD6-203ENST00000437167 COPS2P61201 443 aa11.72□□□□□ -0.53
RGPD6-203ENST00000437167 RBM26Q5T8P6 1007 aaKnown RBP11.72□□□□□ -0.53
RGPD6-203ENST00000437167 ZNF516Q92618 1163 aa11.72□□□□□ -0.53
RGPD6-203ENST00000437167 TESPA1A2RU30 521 aaPredicted RBP11.71□□□□□ -0.53
RGPD6-203ENST00000437167 RCCD1A6NED2 376 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms