RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 C9orf84Q5VXU9 1444 aa16.64■□□□□ 0.25
TMEM116-202ENST00000437003 HNRNPMP52272 730 aaKnown RBP eCLIP16.63■□□□□ 0.25
TMEM116-202ENST00000437003 LAS1LQ9Y4W2 734 aaKnown RBP16.62■□□□□ 0.25
TMEM116-202ENST00000437003 PTPRGP23470 1445 aa16.62■□□□□ 0.25
TMEM116-202ENST00000437003 USP47Q96K76 1375 aa16.62■□□□□ 0.25
TMEM116-202ENST00000437003 SHANK2Q9UPX8 1470 aa16.61■□□□□ 0.25
TMEM116-202ENST00000437003 NUDCQ9Y266 331 aa16.6■□□□□ 0.25
TMEM116-202ENST00000437003 KDM2AQ9Y2K7 1162 aa16.6■□□□□ 0.25
TMEM116-202ENST00000437003 MBD5Q9P267 1494 aa16.6■□□□□ 0.25
TMEM116-202ENST00000437003 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.6■□□□□ 0.25
TMEM116-202ENST00000437003 POLR1AO95602 1720 aaPredicted RBP16.59■□□□□ 0.25
TMEM116-202ENST00000437003 SMG6Q86US8 1419 aaKnown RBP16.58■□□□□ 0.25
TMEM116-202ENST00000437003 KIF15Q9NS87 1388 aa16.58■□□□□ 0.24
TMEM116-202ENST00000437003 NEFMP07197 916 aa16.56■□□□□ 0.24
TMEM116-202ENST00000437003 CARD11Q9BXL7 1154 aa16.55■□□□□ 0.24
TMEM116-202ENST00000437003 BCORL1Q5H9F3 1711 aa16.54■□□□□ 0.24
TMEM116-202ENST00000437003 DHX29Q7Z478 1369 aaKnown RBP16.53■□□□□ 0.24
TMEM116-202ENST00000437003 ARHGEF5Q12774 1597 aa16.52■□□□□ 0.23
TMEM116-202ENST00000437003 RNF123Q5XPI4 1314 aa16.51■□□□□ 0.23
TMEM116-202ENST00000437003 DCAF11Q8TEB1 546 aa16.51■□□□□ 0.23
TMEM116-202ENST00000437003 UHRF1BP1Q6BDS2 1440 aa16.51■□□□□ 0.23
TMEM116-202ENST00000437003 RSPH4AQ5TD94 716 aa16.51■□□□□ 0.23
TMEM116-202ENST00000437003 KDM5CP41229 1560 aa16.51■□□□□ 0.23
TMEM116-202ENST00000437003 KDM5DQ9BY66 1539 aa16.51■□□□□ 0.23
TMEM116-202ENST00000437003 CCDC141Q6ZP82 1450 aa16.51■□□□□ 0.23
TMEM116-202ENST00000437003 TMC1Q8TDI8 760 aa16.5■□□□□ 0.23
TMEM116-202ENST00000437003 ARID4BQ4LE39 1312 aaPredicted RBP16.5■□□□□ 0.23
TMEM116-202ENST00000437003 SAMD9LQ8IVG5 1584 aa16.49■□□□□ 0.23
TMEM116-202ENST00000437003 ST20-MTHFSA0A0A6YYL1 179 aa16.49■□□□□ 0.23
TMEM116-202ENST00000437003 TULP1O00294 542 aaPredicted RBP16.49■□□□□ 0.23
TMEM116-202ENST00000437003 CDC42BPBQ9Y5S2 1711 aa16.49■□□□□ 0.23
TMEM116-202ENST00000437003 RALGAPBQ86X10 1494 aa16.49■□□□□ 0.23
TMEM116-202ENST00000437003 ARHGEF12Q9NZN5 1544 aa16.48■□□□□ 0.23
TMEM116-202ENST00000437003 PREX2Q70Z35 1606 aa16.47■□□□□ 0.23
TMEM116-202ENST00000437003 EXOC6Q8TAG9 804 aa16.46■□□□□ 0.23
TMEM116-202ENST00000437003 PDE4AP27815 886 aa16.46■□□□□ 0.23
TMEM116-202ENST00000437003 CHD1O14646 1710 aa16.46■□□□□ 0.23
TMEM116-202ENST00000437003 FAM135AQ9P2D6 1515 aa16.45■□□□□ 0.22
TMEM116-202ENST00000437003 RGL3Q3MIN7 710 aa16.45■□□□□ 0.22
TMEM116-202ENST00000437003 ARHGAP5Q13017 1502 aa16.45■□□□□ 0.22
TMEM116-202ENST00000437003 AEBP2Q6ZN18 517 aaPredicted RBP16.44■□□□□ 0.22
TMEM116-202ENST00000437003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.44■□□□□ 0.22
TMEM116-202ENST00000437003 ROCK2O75116 1388 aaKnown RBP16.44■□□□□ 0.22
TMEM116-202ENST00000437003 SYCP2Q9BX26 1530 aa16.44■□□□□ 0.22
TMEM116-202ENST00000437003 PKNOX2Q96KN3 472 aa16.43■□□□□ 0.22
TMEM116-202ENST00000437003 PNISRQ8TF01 805 aaKnown RBP16.43■□□□□ 0.22
TMEM116-202ENST00000437003 BRPF3Q9ULD4 1205 aa16.42■□□□□ 0.22
TMEM116-202ENST00000437003 CCDC144AA2RUR9 1427 aa16.42■□□□□ 0.22
TMEM116-202ENST00000437003 TTC37Q6PGP7 1564 aa16.41■□□□□ 0.22
TMEM116-202ENST00000437003 TCERG1O14776 1098 aaKnown RBP16.41■□□□□ 0.22
TMEM116-202ENST00000437003 SKAP1Q86WV1 359 aa16.41■□□□□ 0.22
TMEM116-202ENST00000437003 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.41■□□□□ 0.22
TMEM116-202ENST00000437003 RRP1P56182 461 aaKnown RBP16.4■□□□□ 0.22
TMEM116-202ENST00000437003 USP35Q9P2H5 1018 aa16.4■□□□□ 0.22
TMEM116-202ENST00000437003 BACH2Q9BYV9 841 aa16.39■□□□□ 0.21
TMEM116-202ENST00000437003 SHROOM2Q13796 1616 aa16.38■□□□□ 0.21
TMEM116-202ENST00000437003 PPM1GO15355 546 aaPredicted RBP16.38■□□□□ 0.21
TMEM116-202ENST00000437003 ERCC6L2Q5T890 1561 aa16.37■□□□□ 0.21
TMEM116-202ENST00000437003 ABCC2Q92887 1545 aa16.37■□□□□ 0.21
TMEM116-202ENST00000437003 HOMEZQ8IX15 550 aa16.37■□□□□ 0.21
TMEM116-202ENST00000437003 WASHC2CQ9Y4E1 1318 aa16.36■□□□□ 0.21
TMEM116-202ENST00000437003 PDIA4P13667 645 aaKnown RBP16.36■□□□□ 0.21
TMEM116-202ENST00000437003 NBPF1Q3BBV0 1214 aa16.35■□□□□ 0.21
TMEM116-202ENST00000437003 RCAN3Q9UKA8 241 aa16.35■□□□□ 0.21
TMEM116-202ENST00000437003 PLEKHH2Q8IVE3 1493 aa16.35■□□□□ 0.21
TMEM116-202ENST00000437003 MAST1Q9Y2H9 1570 aa16.35■□□□□ 0.21
TMEM116-202ENST00000437003 MYBBP1AQ9BQG0 1328 aaKnown RBP16.35■□□□□ 0.21
TMEM116-202ENST00000437003 PRAG1Q86YV5 1406 aa16.35■□□□□ 0.21
TMEM116-202ENST00000437003 MYO5CQ9NQX4 1742 aa16.35■□□□□ 0.21
TMEM116-202ENST00000437003 SLC4A3P48751 1232 aa16.35■□□□□ 0.21
TMEM116-202ENST00000437003 PLA2R1Q13018 1463 aa16.34■□□□□ 0.21
TMEM116-202ENST00000437003 UNC13BO14795 1591 aa16.33■□□□□ 0.21
TMEM116-202ENST00000437003 RALBP1Q15311 655 aa16.32■□□□□ 0.2
TMEM116-202ENST00000437003 GSE1Q14687 1217 aa16.32■□□□□ 0.2
TMEM116-202ENST00000437003 PLIN1O60240 522 aa16.31■□□□□ 0.2
TMEM116-202ENST00000437003 CC2D1BQ5T0F9 858 aaKnown RBP16.31■□□□□ 0.2
TMEM116-202ENST00000437003 EFCAB2Q5VUJ9 269 aa16.31■□□□□ 0.2
TMEM116-202ENST00000437003 TRPM1Q7Z4N2 1603 aa16.31■□□□□ 0.2
TMEM116-202ENST00000437003 PLXNC1O60486 1568 aa16.31■□□□□ 0.2
TMEM116-202ENST00000437003 BRD4O60885 1362 aaPredicted RBP16.3■□□□□ 0.2
TMEM116-202ENST00000437003 KTN1Q86UP2 1357 aaKnown RBP16.3■□□□□ 0.2
TMEM116-202ENST00000437003 PLCH2O75038 1416 aa16.3■□□□□ 0.2
TMEM116-202ENST00000437003 A2MP01023 1474 aa16.3■□□□□ 0.2
TMEM116-202ENST00000437003 DUOX2Q9NRD8 1548 aa16.3■□□□□ 0.2
TMEM116-202ENST00000437003 NFKBIBQ15653 356 aa16.29■□□□□ 0.2
TMEM116-202ENST00000437003 MS4A1P11836 297 aa16.29■□□□□ 0.2
TMEM116-202ENST00000437003 IQGAP3Q86VI3 1631 aa16.29■□□□□ 0.2
TMEM116-202ENST00000437003 FRAT1Q92837 279 aaPredicted RBP16.28■□□□□ 0.2
TMEM116-202ENST00000437003 LRPPRCP42704 1394 aaKnown RBP16.27■□□□□ 0.2
TMEM116-202ENST00000437003 CDCA7LQ96GN5 454 aa16.27■□□□□ 0.2
TMEM116-202ENST00000437003 ERBINQ96RT1 1412 aa16.27■□□□□ 0.19
TMEM116-202ENST00000437003 AMER1Q5JTC6 1135 aaPredicted RBP16.26■□□□□ 0.19
TMEM116-202ENST00000437003 NLRP13Q86W25 1043 aa16.26■□□□□ 0.19
TMEM116-202ENST00000437003 GPRASP1Q5JY77 1395 aa16.26■□□□□ 0.19
TMEM116-202ENST00000437003 E9PCH4 1651 aa16.26■□□□□ 0.19
TMEM116-202ENST00000437003 DDRGK1Q96HY6 314 aa16.26■□□□□ 0.19
TMEM116-202ENST00000437003 ZCCHC11Q5TAX3 1644 aaKnown RBP16.25■□□□□ 0.19
TMEM116-202ENST00000437003 TRAPPC8Q9Y2L5 1435 aa16.24■□□□□ 0.19
TMEM116-202ENST00000437003 TESK2Q96S53 571 aa16.23■□□□□ 0.19
TMEM116-202ENST00000437003 DISP3Q9P2K9 1392 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms