RNA–Protein interactions for RNA: ENST00000435606.1

LDLRAD4-204, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-204ENST00000435606 CSPP1Q1MSJ5 1256 aa13.3□□□□□ -0.28
LDLRAD4-204ENST00000435606 MSNP26038 577 aaKnown RBP13.3□□□□□ -0.28
LDLRAD4-204ENST00000435606 RAPGEF2Q9Y4G8 1499 aa13.29□□□□□ -0.28
LDLRAD4-204ENST00000435606 VGFO15240 615 aaPredicted RBP13.29□□□□□ -0.28
LDLRAD4-204ENST00000435606 GBP4Q96PP9 640 aa13.29□□□□□ -0.28
LDLRAD4-204ENST00000435606 CADPSQ9ULU8 1353 aa13.29□□□□□ -0.28
LDLRAD4-204ENST00000435606 NUTM2FA1L443 756 aa13.29□□□□□ -0.28
LDLRAD4-204ENST00000435606 KIF3AQ9Y496 699 aa13.29□□□□□ -0.28
LDLRAD4-204ENST00000435606 B4GALNT3Q6L9W6 998 aa13.29□□□□□ -0.28
LDLRAD4-204ENST00000435606 COG3Q96JB2 828 aa13.29□□□□□ -0.28
LDLRAD4-204ENST00000435606 TOMM22Q9NS69 142 aa13.28□□□□□ -0.28
LDLRAD4-204ENST00000435606 CTDP1Q9Y5B0 961 aaPredicted RBP13.28□□□□□ -0.28
LDLRAD4-204ENST00000435606 NOP58Q9Y2X3 529 aaKnown RBP13.28□□□□□ -0.28
LDLRAD4-204ENST00000435606 LRRFIP1Q32MZ4 808 aaKnown RBP13.28□□□□□ -0.28
LDLRAD4-204ENST00000435606 TTC5Q8N0Z6 440 aa13.28□□□□□ -0.28
LDLRAD4-204ENST00000435606 NAP1L5Q96NT1 182 aaPredicted RBP13.28□□□□□ -0.28
LDLRAD4-204ENST00000435606 CHMP4CQ96CF2 233 aa13.27□□□□□ -0.28
LDLRAD4-204ENST00000435606 CEP89Q96ST8 783 aa13.26□□□□□ -0.29
LDLRAD4-204ENST00000435606 TCEAL9Q9UHQ7 104 aa13.26□□□□□ -0.29
LDLRAD4-204ENST00000435606 TOP2AP11388 1531 aaKnown RBP13.26□□□□□ -0.29
LDLRAD4-204ENST00000435606 MYO15BQ96JP2 1530 aa13.26□□□□□ -0.29
LDLRAD4-204ENST00000435606 RCAN3Q9UKA8 241 aa13.26□□□□□ -0.29
LDLRAD4-204ENST00000435606 EVC2Q86UK5 1308 aa13.26□□□□□ -0.29
LDLRAD4-204ENST00000435606 CCDC144AA2RUR9 1427 aa13.25□□□□□ -0.29
LDLRAD4-204ENST00000435606 PSME1Q06323 249 aa13.25□□□□□ -0.29
LDLRAD4-204ENST00000435606 SPRYD3Q8NCJ5 442 aa13.25□□□□□ -0.29
LDLRAD4-204ENST00000435606 PHF23Q9BUL5 403 aaPredicted RBP13.25□□□□□ -0.29
LDLRAD4-204ENST00000435606 TRAK1Q9UPV9 953 aa13.25□□□□□ -0.29
LDLRAD4-204ENST00000435606 PTPRGP23470 1445 aa13.25□□□□□ -0.29
LDLRAD4-204ENST00000435606 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.25□□□□□ -0.29
LDLRAD4-204ENST00000435606 TEFQ10587 303 aa13.24□□□□□ -0.29
LDLRAD4-204ENST00000435606 PHLDB1Q86UU1 1377 aa13.24□□□□□ -0.29
LDLRAD4-204ENST00000435606 NEXNQ0ZGT2 675 aa13.24□□□□□ -0.29
LDLRAD4-204ENST00000435606 MROH2BQ7Z745 1585 aa13.24□□□□□ -0.29
LDLRAD4-204ENST00000435606 ATF3P18847 181 aa13.23□□□□□ -0.29
LDLRAD4-204ENST00000435606 KRI1Q8N9T8 703 aaKnown RBP13.23□□□□□ -0.29
LDLRAD4-204ENST00000435606 AKAP17AQ02040 695 aaKnown RBP13.23□□□□□ -0.29
LDLRAD4-204ENST00000435606 CGNL1Q0VF96 1302 aa13.22□□□□□ -0.29
LDLRAD4-204ENST00000435606 CWC22Q9HCG8 908 aaKnown RBP13.22□□□□□ -0.29
LDLRAD4-204ENST00000435606 WASHC2AQ641Q2 1341 aa13.21□□□□□ -0.29
LDLRAD4-204ENST00000435606 KIF16BQ96L93 1317 aa13.21□□□□□ -0.29
LDLRAD4-204ENST00000435606 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.21□□□□□ -0.29
LDLRAD4-204ENST00000435606 RAB3GAP2Q9H2M9 1393 aa13.21□□□□□ -0.29
LDLRAD4-204ENST00000435606 CENPJQ9HC77 1338 aaPredicted RBP13.21□□□□□ -0.3
LDLRAD4-204ENST00000435606 SYTL4Q96C24 671 aaPredicted RBP13.2□□□□□ -0.3
LDLRAD4-204ENST00000435606 FHOD3Q2V2M9 1422 aa13.2□□□□□ -0.3
LDLRAD4-204ENST00000435606 VPS37DQ86XT2 251 aa13.2□□□□□ -0.3
LDLRAD4-204ENST00000435606 SYNE3Q6ZMZ3 975 aa13.2□□□□□ -0.3
LDLRAD4-204ENST00000435606 PRDM2Q13029 1718 aa13.19□□□□□ -0.3
LDLRAD4-204ENST00000435606 TCERG1O14776 1098 aaKnown RBP13.19□□□□□ -0.3
LDLRAD4-204ENST00000435606 WIZO95785 1651 aa13.19□□□□□ -0.3
LDLRAD4-204ENST00000435606 FAM69CQ0P6D2 419 aa13.19□□□□□ -0.3
LDLRAD4-204ENST00000435606 USP35Q9P2H5 1018 aa13.18□□□□□ -0.3
LDLRAD4-204ENST00000435606 NLRP13Q86W25 1043 aa13.18□□□□□ -0.3
LDLRAD4-204ENST00000435606 FANCD2Q9BXW9 1451 aa13.18□□□□□ -0.3
LDLRAD4-204ENST00000435606 A0A0U1RQG5 324 aaPredicted RBP13.18□□□□□ -0.3
LDLRAD4-204ENST00000435606 SF3A1Q15459 793 aaKnown RBP13.17□□□□□ -0.3
LDLRAD4-204ENST00000435606 KANK4Q5T7N3 995 aaPredicted RBP13.17□□□□□ -0.3
LDLRAD4-204ENST00000435606 ST18O60284 1047 aa13.17□□□□□ -0.3
LDLRAD4-204ENST00000435606 DDX58O95786 925 aaKnown RBP13.17□□□□□ -0.3
LDLRAD4-204ENST00000435606 CREBRFQ8IUR6 639 aa13.17□□□□□ -0.3
LDLRAD4-204ENST00000435606 CCDC146Q8IYE0 955 aa13.17□□□□□ -0.3
LDLRAD4-204ENST00000435606 KIF15Q9NS87 1388 aa13.16□□□□□ -0.3
LDLRAD4-204ENST00000435606 KLHL34Q8N239 644 aa13.16□□□□□ -0.3
LDLRAD4-204ENST00000435606 TPM2P07951 284 aa13.16□□□□□ -0.3
LDLRAD4-204ENST00000435606 PHF14O94880 888 aa13.16□□□□□ -0.3
LDLRAD4-204ENST00000435606 FBXW7Q969H0 707 aa13.16□□□□□ -0.3
LDLRAD4-204ENST00000435606 C9orf78Q9NZ63 289 aaPredicted RBP13.15□□□□□ -0.3
LDLRAD4-204ENST00000435606 PDE3BQ13370 1112 aa13.15□□□□□ -0.3
LDLRAD4-204ENST00000435606 H3BQV1 296 aa13.15□□□□□ -0.3
LDLRAD4-204ENST00000435606 RAD21O60216 631 aa13.15□□□□□ -0.3
LDLRAD4-204ENST00000435606 IFFO2Q5TF58 517 aa13.15□□□□□ -0.3
LDLRAD4-204ENST00000435606 MFAP1P55081 439 aaKnown RBP13.15□□□□□ -0.31
LDLRAD4-204ENST00000435606 TPD52L1Q16890 204 aaPredicted RBP13.15□□□□□ -0.31
LDLRAD4-204ENST00000435606 TPM3P06753 285 aa13.14□□□□□ -0.31
LDLRAD4-204ENST00000435606 RBM33Q96EV2 1170 aaKnown RBP13.14□□□□□ -0.31
LDLRAD4-204ENST00000435606 CPLX2Q6PUV4 134 aaKnown RBP13.14□□□□□ -0.31
LDLRAD4-204ENST00000435606 TSR1Q2NL82 804 aaKnown RBP13.14□□□□□ -0.31
LDLRAD4-204ENST00000435606 CNKSR2Q8WXI2 1034 aa13.13□□□□□ -0.31
LDLRAD4-204ENST00000435606 ANO8Q9HCE9 1232 aaPredicted RBP13.13□□□□□ -0.31
LDLRAD4-204ENST00000435606 NGEFQ8N5V2 710 aa13.13□□□□□ -0.31
LDLRAD4-204ENST00000435606 FAM184AQ8NB25 1140 aa13.13□□□□□ -0.31
LDLRAD4-204ENST00000435606 MINK1Q8N4C8 1332 aaPredicted RBP13.13□□□□□ -0.31
LDLRAD4-204ENST00000435606 L3MBTL2Q969R5 705 aa13.12□□□□□ -0.31
LDLRAD4-204ENST00000435606 PDE4CQ08493 712 aa13.12□□□□□ -0.31
LDLRAD4-204ENST00000435606 RAPGEF4Q8WZA2 1011 aa13.12□□□□□ -0.31
LDLRAD4-204ENST00000435606 GOLGA6L1Q8N7Z2 621 aa13.11□□□□□ -0.31
LDLRAD4-204ENST00000435606 SF3B2Q13435 895 aaKnown RBP13.11□□□□□ -0.31
LDLRAD4-204ENST00000435606 RUFY2Q8WXA3 655 aa13.11□□□□□ -0.31
LDLRAD4-204ENST00000435606 CLUAP1Q96AJ1 413 aa13.11□□□□□ -0.31
LDLRAD4-204ENST00000435606 TRIM29Q14134 588 aa13.11□□□□□ -0.31
LDLRAD4-204ENST00000435606 RILPL2Q969X0 211 aa13.1□□□□□ -0.31
LDLRAD4-204ENST00000435606 PES1O00541 588 aaKnown RBP13.1□□□□□ -0.31
LDLRAD4-204ENST00000435606 EIF2S2P20042 333 aaKnown RBP13.1□□□□□ -0.31
LDLRAD4-204ENST00000435606 ROCK1Q13464 1354 aa13.1□□□□□ -0.31
LDLRAD4-204ENST00000435606 SMARCA4P51532 1647 aa13.1□□□□□ -0.31
LDLRAD4-204ENST00000435606 CCDC47Q96A33 483 aaKnown RBP13.09□□□□□ -0.31
LDLRAD4-204ENST00000435606 DIAPH3Q9NSV4 1193 aa13.09□□□□□ -0.31
LDLRAD4-204ENST00000435606 MYBBP1AQ9BQG0 1328 aaKnown RBP13.09□□□□□ -0.31
LDLRAD4-204ENST00000435606 MIA2Q96PC5 1412 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms