RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 SAFB2Q14151 953 aaKnown RBP eCLIP16.38■□□□□ 0.21
CLDN4-203ENST00000435050 TRAPPC8Q9Y2L5 1435 aa16.38■□□□□ 0.21
CLDN4-203ENST00000435050 ABCC2Q92887 1545 aa16.38■□□□□ 0.21
CLDN4-203ENST00000435050 ESF1Q9H501 851 aaKnown RBP16.38■□□□□ 0.21
CLDN4-203ENST00000435050 PLCH2O75038 1416 aa16.36■□□□□ 0.21
CLDN4-203ENST00000435050 PANK3Q9H999 370 aa16.35■□□□□ 0.21
CLDN4-203ENST00000435050 TNNT2P45379 298 aaPredicted RBP16.34■□□□□ 0.21
CLDN4-203ENST00000435050 ADGRL2O95490 1459 aa16.34■□□□□ 0.21
CLDN4-203ENST00000435050 MBD5Q9P267 1494 aa16.34■□□□□ 0.21
CLDN4-203ENST00000435050 WDR43Q15061 677 aaKnown RBP eCLIP16.32■□□□□ 0.2
CLDN4-203ENST00000435050 FAM69CQ0P6D2 419 aa16.32■□□□□ 0.2
CLDN4-203ENST00000435050 STK26Q9P289 416 aa16.32■□□□□ 0.2
CLDN4-203ENST00000435050 TRAK1Q9UPV9 953 aa16.32■□□□□ 0.2
CLDN4-203ENST00000435050 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.32■□□□□ 0.2
CLDN4-203ENST00000435050 FANCAO15360 1455 aa16.31■□□□□ 0.2
CLDN4-203ENST00000435050 TEX14Q8IWB6 1497 aa16.31■□□□□ 0.2
CLDN4-203ENST00000435050 CFAP70Q5T0N1 1121 aa16.3■□□□□ 0.2
CLDN4-203ENST00000435050 KTN1Q86UP2 1357 aaKnown RBP16.3■□□□□ 0.2
CLDN4-203ENST00000435050 ASXL2Q76L83 1435 aa16.3■□□□□ 0.2
CLDN4-203ENST00000435050 ADGRL1O94910 1474 aa16.3■□□□□ 0.2
CLDN4-203ENST00000435050 CDCA8Q53HL2 280 aa16.3■□□□□ 0.2
CLDN4-203ENST00000435050 SHANK2Q9UPX8 1470 aa16.3■□□□□ 0.2
CLDN4-203ENST00000435050 ARID4BQ4LE39 1312 aaPredicted RBP16.29■□□□□ 0.2
CLDN4-203ENST00000435050 TTC37Q6PGP7 1564 aa16.29■□□□□ 0.2
CLDN4-203ENST00000435050 FAM135AQ9P2D6 1515 aa16.29■□□□□ 0.2
CLDN4-203ENST00000435050 CDC42BPAQ5VT25 1732 aa16.28■□□□□ 0.2
CLDN4-203ENST00000435050 SAMD9LQ8IVG5 1584 aa16.28■□□□□ 0.2
CLDN4-203ENST00000435050 B4GALNT3Q6L9W6 998 aa16.27■□□□□ 0.2
CLDN4-203ENST00000435050 CD109Q6YHK3 1445 aa16.27■□□□□ 0.19
CLDN4-203ENST00000435050 RALBP1Q15311 655 aa16.27■□□□□ 0.19
CLDN4-203ENST00000435050 ERICH6Q7L0X2 663 aa16.26■□□□□ 0.19
CLDN4-203ENST00000435050 WDR7Q9Y4E6 1490 aa16.26■□□□□ 0.19
CLDN4-203ENST00000435050 TMEM132EQ6IEE7 984 aa16.25■□□□□ 0.19
CLDN4-203ENST00000435050 MYBBP1AQ9BQG0 1328 aaKnown RBP16.23■□□□□ 0.19
CLDN4-203ENST00000435050 NLRP13Q86W25 1043 aa16.23■□□□□ 0.19
CLDN4-203ENST00000435050 CCDC136Q96JN2 1154 aa16.23■□□□□ 0.19
CLDN4-203ENST00000435050 ADGBQ8N7X0 1667 aa16.23■□□□□ 0.19
CLDN4-203ENST00000435050 ARHGEF12Q9NZN5 1544 aa16.21■□□□□ 0.19
CLDN4-203ENST00000435050 ADCY10Q96PN6 1610 aa16.21■□□□□ 0.19
CLDN4-203ENST00000435050 NEUROD2Q15784 382 aa16.2■□□□□ 0.18
CLDN4-203ENST00000435050 POGKQ9P215 609 aa16.2■□□□□ 0.18
CLDN4-203ENST00000435050 KDM5BQ9UGL1 1544 aa16.2■□□□□ 0.18
CLDN4-203ENST00000435050 DUOX2Q9NRD8 1548 aa16.19■□□□□ 0.18
CLDN4-203ENST00000435050 ZBED9Q6R2W3 1325 aa16.19■□□□□ 0.18
CLDN4-203ENST00000435050 PREX2Q70Z35 1606 aa16.17■□□□□ 0.18
CLDN4-203ENST00000435050 ARHGEF5Q12774 1597 aa16.17■□□□□ 0.18
CLDN4-203ENST00000435050 SRPK2P78362 688 aaKnown RBP16.17■□□□□ 0.18
CLDN4-203ENST00000435050 ZCCHC11Q5TAX3 1644 aaKnown RBP16.17■□□□□ 0.18
CLDN4-203ENST00000435050 ADGRF5Q8IZF2 1346 aa16.17■□□□□ 0.18
CLDN4-203ENST00000435050 DHX29Q7Z478 1369 aaKnown RBP16.16■□□□□ 0.18
CLDN4-203ENST00000435050 ERBINQ96RT1 1412 aa16.15■□□□□ 0.18
CLDN4-203ENST00000435050 RALGAPBQ86X10 1494 aa16.15■□□□□ 0.18
CLDN4-203ENST00000435050 EIF3AQ14152 1382 aaKnown RBP16.15■□□□□ 0.18
CLDN4-203ENST00000435050 CCDC146Q8IYE0 955 aa16.15■□□□□ 0.18
CLDN4-203ENST00000435050 PPP4R2Q9NY27 417 aa16.15■□□□□ 0.18
CLDN4-203ENST00000435050 PRAG1Q86YV5 1406 aa16.15■□□□□ 0.18
CLDN4-203ENST00000435050 MYO5CQ9NQX4 1742 aa16.15■□□□□ 0.18
CLDN4-203ENST00000435050 PNISRQ8TF01 805 aaKnown RBP16.15■□□□□ 0.18
CLDN4-203ENST00000435050 NUDCQ9Y266 331 aa16.15■□□□□ 0.18
CLDN4-203ENST00000435050 DISP3Q9P2K9 1392 aa16.14■□□□□ 0.17
CLDN4-203ENST00000435050 CDC42BPBQ9Y5S2 1711 aa16.14■□□□□ 0.17
CLDN4-203ENST00000435050 SPATA31E1Q6ZUB1 1445 aa16.14■□□□□ 0.17
CLDN4-203ENST00000435050 TSHZ2Q9NRE2 1034 aa16.14■□□□□ 0.17
CLDN4-203ENST00000435050 MORC1Q86VD1 984 aa16.12■□□□□ 0.17
CLDN4-203ENST00000435050 A2MP01023 1474 aa16.12■□□□□ 0.17
CLDN4-203ENST00000435050 TRHP20396 242 aaPredicted RBP16.12■□□□□ 0.17
CLDN4-203ENST00000435050 CANXP27824 592 aaKnown RBP16.12■□□□□ 0.17
CLDN4-203ENST00000435050 PPM1GO15355 546 aaPredicted RBP16.12■□□□□ 0.17
CLDN4-203ENST00000435050 UHRF1BP1LA0JNW5 1464 aa16.11■□□□□ 0.17
CLDN4-203ENST00000435050 VGFO15240 615 aaPredicted RBP16.09■□□□□ 0.17
CLDN4-203ENST00000435050 CENPJQ9HC77 1338 aaPredicted RBP16.09■□□□□ 0.17
CLDN4-203ENST00000435050 CLASP1Q7Z460 1538 aa16.09■□□□□ 0.17
CLDN4-203ENST00000435050 TESK2Q96S53 571 aa16.09■□□□□ 0.17
CLDN4-203ENST00000435050 CROCC2H7BZ55 1655 aa16.09■□□□□ 0.17
CLDN4-203ENST00000435050 PLA2R1Q13018 1463 aa16.08■□□□□ 0.17
CLDN4-203ENST00000435050 UHRF1BP1Q6BDS2 1440 aa16.08■□□□□ 0.16
CLDN4-203ENST00000435050 MINK1Q8N4C8 1332 aaPredicted RBP16.08■□□□□ 0.16
CLDN4-203ENST00000435050 CDCA7LQ96GN5 454 aa16.07■□□□□ 0.16
CLDN4-203ENST00000435050 FBXO31Q5XUX0 539 aaPredicted RBP16.07■□□□□ 0.16
CLDN4-203ENST00000435050 RCAN3Q9UKA8 241 aa16.07■□□□□ 0.16
CLDN4-203ENST00000435050 SLC12A5Q9H2X9 1139 aa16.06■□□□□ 0.16
CLDN4-203ENST00000435050 ABCC1P33527 1531 aa16.06■□□□□ 0.16
CLDN4-203ENST00000435050 SHROOM2Q13796 1616 aa16.06■□□□□ 0.16
CLDN4-203ENST00000435050 STAC3Q96MF2 364 aa16.05■□□□□ 0.16
CLDN4-203ENST00000435050 ADAMTS8Q9UP79 889 aa16.05■□□□□ 0.16
CLDN4-203ENST00000435050 BRD4O60885 1362 aaPredicted RBP16.05■□□□□ 0.16
CLDN4-203ENST00000435050 RTEL1-TNFRSF6BF6WH68 1400 aa16.05■□□□□ 0.16
CLDN4-203ENST00000435050 ATP7AQ04656 1500 aa16.05■□□□□ 0.16
CLDN4-203ENST00000435050 SLC24A1O60721 1099 aa16.05■□□□□ 0.16
CLDN4-203ENST00000435050 CABP2Q9NPB3 220 aa16.05■□□□□ 0.16
CLDN4-203ENST00000435050 U2SURPO15042 1029 aaKnown RBP16.04■□□□□ 0.16
CLDN4-203ENST00000435050 PLIN1O60240 522 aa16.04■□□□□ 0.16
CLDN4-203ENST00000435050 IDI1Q13907 227 aa16.04■□□□□ 0.16
CLDN4-203ENST00000435050 ZNF518AQ6AHZ1 1483 aa16.04■□□□□ 0.16
CLDN4-203ENST00000435050 CFAP65Q6ZU64 1925 aaKnown RBP16.03■□□□□ 0.16
CLDN4-203ENST00000435050 NPM2Q86SE8 214 aaKnown RBP16.03■□□□□ 0.16
CLDN4-203ENST00000435050 NOS1P29475 1434 aa16.03■□□□□ 0.16
CLDN4-203ENST00000435050 PPP2R1AP30153 589 aa16.03■□□□□ 0.16
CLDN4-203ENST00000435050 CFAP53Q96M91 514 aa16.02■□□□□ 0.15
CLDN4-203ENST00000435050 MAST1Q9Y2H9 1570 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms