RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 BRPF3Q9ULD4 1205 aa16.42■□□□□ 0.22
SEMA3F-206ENST00000434342 ABCC10Q5T3U5 1492 aa16.41■□□□□ 0.22
SEMA3F-206ENST00000434342 ROCK2O75116 1388 aaKnown RBP16.4■□□□□ 0.22
SEMA3F-206ENST00000434342 VSIG10Q8N0Z9 540 aa16.4■□□□□ 0.22
SEMA3F-206ENST00000434342 NBPF1Q3BBV0 1214 aa16.39■□□□□ 0.21
SEMA3F-206ENST00000434342 MBD5Q9P267 1494 aa16.38■□□□□ 0.21
SEMA3F-206ENST00000434342 ABCA8O94911 1581 aa16.37■□□□□ 0.21
SEMA3F-206ENST00000434342 PNISRQ8TF01 805 aaKnown RBP16.37■□□□□ 0.21
SEMA3F-206ENST00000434342 ARID4BQ4LE39 1312 aaPredicted RBP16.36■□□□□ 0.21
SEMA3F-206ENST00000434342 RSPH4AQ5TD94 716 aa16.36■□□□□ 0.21
SEMA3F-206ENST00000434342 ADGBQ8N7X0 1667 aa16.35■□□□□ 0.21
SEMA3F-206ENST00000434342 ZMYND15Q9H091 742 aa16.35■□□□□ 0.21
SEMA3F-206ENST00000434342 NUDCQ9Y266 331 aa16.35■□□□□ 0.21
SEMA3F-206ENST00000434342 LAS1LQ9Y4W2 734 aaKnown RBP16.35■□□□□ 0.21
SEMA3F-206ENST00000434342 CCDC144AA2RUR9 1427 aa16.34■□□□□ 0.21
SEMA3F-206ENST00000434342 ADCY10Q96PN6 1610 aa16.34■□□□□ 0.21
SEMA3F-206ENST00000434342 BCORL1Q5H9F3 1711 aa16.33■□□□□ 0.2
SEMA3F-206ENST00000434342 SHANK2Q9UPX8 1470 aa16.32■□□□□ 0.2
SEMA3F-206ENST00000434342 CDC42BPAQ5VT25 1732 aa16.32■□□□□ 0.2
SEMA3F-206ENST00000434342 CCDC141Q6ZP82 1450 aa16.32■□□□□ 0.2
SEMA3F-206ENST00000434342 RALGAPBQ86X10 1494 aa16.32■□□□□ 0.2
SEMA3F-206ENST00000434342 UHRF1BP1Q6BDS2 1440 aa16.32■□□□□ 0.2
SEMA3F-206ENST00000434342 A0A0U1RQG5 324 aaPredicted RBP16.31■□□□□ 0.2
SEMA3F-206ENST00000434342 CC2D1BQ5T0F9 858 aaKnown RBP16.31■□□□□ 0.2
SEMA3F-206ENST00000434342 ZBTB47Q9UFB7 747 aaPredicted RBP16.3■□□□□ 0.2
SEMA3F-206ENST00000434342 MYBBP1AQ9BQG0 1328 aaKnown RBP16.29■□□□□ 0.2
SEMA3F-206ENST00000434342 CROCC2H7BZ55 1655 aa16.29■□□□□ 0.2
SEMA3F-206ENST00000434342 ARHGAP5Q13017 1502 aa16.29■□□□□ 0.2
SEMA3F-206ENST00000434342 RALBP1Q15311 655 aa16.29■□□□□ 0.2
SEMA3F-206ENST00000434342 KDM5CP41229 1560 aa16.28■□□□□ 0.2
SEMA3F-206ENST00000434342 NEFMP07197 916 aa16.27■□□□□ 0.2
SEMA3F-206ENST00000434342 SMG6Q86US8 1419 aaKnown RBP16.27■□□□□ 0.19
SEMA3F-206ENST00000434342 FAM135AQ9P2D6 1515 aa16.27■□□□□ 0.19
SEMA3F-206ENST00000434342 NPM2Q86SE8 214 aaKnown RBP16.27■□□□□ 0.19
SEMA3F-206ENST00000434342 PLEKHH2Q8IVE3 1493 aa16.26■□□□□ 0.19
SEMA3F-206ENST00000434342 SYCP2Q9BX26 1530 aa16.25■□□□□ 0.19
SEMA3F-206ENST00000434342 ANP32AP39687 249 aaKnown RBP16.25■□□□□ 0.19
SEMA3F-206ENST00000434342 EFCAB2Q5VUJ9 269 aa16.24■□□□□ 0.19
SEMA3F-206ENST00000434342 ARHGEF12Q9NZN5 1544 aa16.24■□□□□ 0.19
SEMA3F-206ENST00000434342 SAMD9LQ8IVG5 1584 aa16.24■□□□□ 0.19
SEMA3F-206ENST00000434342 NLRP13Q86W25 1043 aa16.24■□□□□ 0.19
SEMA3F-206ENST00000434342 PANK3Q9H999 370 aa16.24■□□□□ 0.19
SEMA3F-206ENST00000434342 KTN1Q86UP2 1357 aaKnown RBP16.23■□□□□ 0.19
SEMA3F-206ENST00000434342 AFAP1Q8N556 730 aa16.23■□□□□ 0.19
SEMA3F-206ENST00000434342 PRAG1Q86YV5 1406 aa16.22■□□□□ 0.19
SEMA3F-206ENST00000434342 BRD4O60885 1362 aaPredicted RBP16.22■□□□□ 0.19
SEMA3F-206ENST00000434342 GLIPR1L2Q4G1C9 344 aa16.21■□□□□ 0.19
SEMA3F-206ENST00000434342 PLA2R1Q13018 1463 aa16.21■□□□□ 0.18
SEMA3F-206ENST00000434342 DAXXQ9UER7 740 aaPredicted RBP16.2■□□□□ 0.18
SEMA3F-206ENST00000434342 ARHGEF5Q12774 1597 aa16.2■□□□□ 0.18
SEMA3F-206ENST00000434342 TMF1P82094 1093 aa16.2■□□□□ 0.18
SEMA3F-206ENST00000434342 KDM5DQ9BY66 1539 aa16.2■□□□□ 0.18
SEMA3F-206ENST00000434342 PER1O15534 1290 aaPredicted RBP16.19■□□□□ 0.18
SEMA3F-206ENST00000434342 TESK2Q96S53 571 aa16.19■□□□□ 0.18
SEMA3F-206ENST00000434342 IPO9Q96P70 1041 aaKnown RBP16.19■□□□□ 0.18
SEMA3F-206ENST00000434342 DISP3Q9P2K9 1392 aa16.18■□□□□ 0.18
SEMA3F-206ENST00000434342 CDCA7LQ96GN5 454 aa16.18■□□□□ 0.18
SEMA3F-206ENST00000434342 ERCC6L2Q5T890 1561 aa16.17■□□□□ 0.18
SEMA3F-206ENST00000434342 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.17■□□□□ 0.18
SEMA3F-206ENST00000434342 POLR1AO95602 1720 aaPredicted RBP16.17■□□□□ 0.18
SEMA3F-206ENST00000434342 SPAG9O60271 1321 aaKnown RBP16.17■□□□□ 0.18
SEMA3F-206ENST00000434342 RCAN3Q9UKA8 241 aa16.16■□□□□ 0.18
SEMA3F-206ENST00000434342 TTC37Q6PGP7 1564 aa16.16■□□□□ 0.18
SEMA3F-206ENST00000434342 A2MP01023 1474 aa16.16■□□□□ 0.18
SEMA3F-206ENST00000434342 CDC42BPBQ9Y5S2 1711 aa16.16■□□□□ 0.18
SEMA3F-206ENST00000434342 LRPPRCP42704 1394 aaKnown RBP16.15■□□□□ 0.18
SEMA3F-206ENST00000434342 EXOC6Q8TAG9 804 aa16.14■□□□□ 0.17
SEMA3F-206ENST00000434342 RNF123Q5XPI4 1314 aa16.14■□□□□ 0.17
SEMA3F-206ENST00000434342 PREX2Q70Z35 1606 aa16.14■□□□□ 0.17
SEMA3F-206ENST00000434342 RRP1P56182 461 aaKnown RBP16.13■□□□□ 0.17
SEMA3F-206ENST00000434342 TRAPPC8Q9Y2L5 1435 aa16.13■□□□□ 0.17
SEMA3F-206ENST00000434342 KNSTRNQ9Y448 316 aa16.12■□□□□ 0.17
SEMA3F-206ENST00000434342 PARD3Q8TEW0 1356 aa16.12■□□□□ 0.17
SEMA3F-206ENST00000434342 PLIN1O60240 522 aa16.11■□□□□ 0.17
SEMA3F-206ENST00000434342 ERBINQ96RT1 1412 aa16.11■□□□□ 0.17
SEMA3F-206ENST00000434342 PLCH2O75038 1416 aa16.11■□□□□ 0.17
SEMA3F-206ENST00000434342 KIF3BO15066 747 aa16.11■□□□□ 0.17
SEMA3F-206ENST00000434342 GPRASP1Q5JY77 1395 aa16.1■□□□□ 0.17
SEMA3F-206ENST00000434342 ABCC2Q92887 1545 aa16.09■□□□□ 0.17
SEMA3F-206ENST00000434342 RSPH6AQ9H0K4 717 aa16.09■□□□□ 0.17
SEMA3F-206ENST00000434342 CHD1O14646 1710 aa16.09■□□□□ 0.17
SEMA3F-206ENST00000434342 ADAMTS8Q9UP79 889 aa16.08■□□□□ 0.16
SEMA3F-206ENST00000434342 DUOX2Q9NRD8 1548 aa16.06■□□□□ 0.16
SEMA3F-206ENST00000434342 PDE3BQ13370 1112 aa16.06■□□□□ 0.16
SEMA3F-206ENST00000434342 WDR43Q15061 677 aaKnown RBP eCLIP16.06■□□□□ 0.16
SEMA3F-206ENST00000434342 WASHC2CQ9Y4E1 1318 aa16.06■□□□□ 0.16
SEMA3F-206ENST00000434342 CHGAP10645 457 aaKnown RBP16.05■□□□□ 0.16
SEMA3F-206ENST00000434342 COL17A1Q9UMD9 1497 aaPredicted RBP16.05■□□□□ 0.16
SEMA3F-206ENST00000434342 TRPM1Q7Z4N2 1603 aa16.04■□□□□ 0.16
SEMA3F-206ENST00000434342 PPP2R1AP30153 589 aa16.02■□□□□ 0.16
SEMA3F-206ENST00000434342 CFAP70Q5T0N1 1121 aa16.02■□□□□ 0.16
SEMA3F-206ENST00000434342 CDCA8Q53HL2 280 aa16.02■□□□□ 0.15
SEMA3F-206ENST00000434342 UNC13BO14795 1591 aa16.01■□□□□ 0.15
SEMA3F-206ENST00000434342 MAST1Q9Y2H9 1570 aa16■□□□□ 0.15
SEMA3F-206ENST00000434342 SCAPERQ9BY12 1400 aa16■□□□□ 0.15
SEMA3F-206ENST00000434342 MYO5CQ9NQX4 1742 aa16■□□□□ 0.15
SEMA3F-206ENST00000434342 KANK1Q14678 1352 aa16■□□□□ 0.15
SEMA3F-206ENST00000434342 GSE1Q14687 1217 aa15.99■□□□□ 0.15
SEMA3F-206ENST00000434342 CCDC146Q8IYE0 955 aa15.99■□□□□ 0.15
SEMA3F-206ENST00000434342 SKAP1Q86WV1 359 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms