RNA–Protein interactions for RNA: ENST00000432945.1

HMGN1P33-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 33, humanhuman

BASIC

Gene HMGN1P33, Length 451 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P33-201ENST00000432945 PHF14O94880 888 aa3.61□□□□□ -1.83
HMGN1P33-201ENST00000432945 ZBED2Q9BTP6 218 aa3.61□□□□□ -1.83
HMGN1P33-201ENST00000432945 RABGEF1Q9UJ41 708 aa3.61□□□□□ -1.83
HMGN1P33-201ENST00000432945 PTPN5P54829 565 aa3.6□□□□□ -1.83
HMGN1P33-201ENST00000432945 THSD4Q6ZMP0 1018 aa3.6□□□□□ -1.83
HMGN1P33-201ENST00000432945 BBXQ8WY36 941 aaPredicted RBP3.6□□□□□ -1.83
HMGN1P33-201ENST00000432945 BHMG1C9JSJ3 638 aaPredicted RBP3.59□□□□□ -1.83
HMGN1P33-201ENST00000432945 AMER1Q5JTC6 1135 aaPredicted RBP3.59□□□□□ -1.83
HMGN1P33-201ENST00000432945 NECTIN2Q92692 538 aa3.59□□□□□ -1.83
HMGN1P33-201ENST00000432945 ADAM33Q9BZ11 813 aa3.59□□□□□ -1.83
HMGN1P33-201ENST00000432945 WDR70Q9NW82 654 aa3.59□□□□□ -1.83
HMGN1P33-201ENST00000432945 SPDYE16A6NNV3 312 aaPredicted RBP3.58□□□□□ -1.84
HMGN1P33-201ENST00000432945 SPRYD3Q8NCJ5 442 aa3.58□□□□□ -1.84
HMGN1P33-201ENST00000432945 CERKQ8TCT0 537 aa3.58□□□□□ -1.84
HMGN1P33-201ENST00000432945 SLC4A3P48751 1232 aa3.57□□□□□ -1.84
HMGN1P33-201ENST00000432945 CAMK2BQ13554 666 aa3.57□□□□□ -1.84
HMGN1P33-201ENST00000432945 PACS2Q86VP3 889 aa3.57□□□□□ -1.84
HMGN1P33-201ENST00000432945 IGSF5Q9NSI5 407 aa3.57□□□□□ -1.84
HMGN1P33-201ENST00000432945 PCDHGA10Q9Y5H3 936 aa3.57□□□□□ -1.84
HMGN1P33-201ENST00000432945 HDGFP51858 240 aaKnown RBP3.56□□□□□ -1.84
HMGN1P33-201ENST00000432945 FAM98CQ17RN3 349 aaKnown RBP3.56□□□□□ -1.84
HMGN1P33-201ENST00000432945 LRCH3Q96II8 777 aa3.56□□□□□ -1.84
HMGN1P33-201ENST00000432945 EMILIN3Q9NT22 766 aa3.56□□□□□ -1.84
HMGN1P33-201ENST00000432945 A0A0G2JS52 829 aa3.55□□□□□ -1.84
HMGN1P33-201ENST00000432945 SOWAHBA6NEL2 793 aa3.55□□□□□ -1.84
HMGN1P33-201ENST00000432945 TRIM6-TRIM34B2RNG4 842 aa3.55□□□□□ -1.84
HMGN1P33-201ENST00000432945 DPYSL4O14531 572 aa3.55□□□□□ -1.84
HMGN1P33-201ENST00000432945 MAP3K7O43318 606 aa3.55□□□□□ -1.84
HMGN1P33-201ENST00000432945 PDIA6Q15084 440 aa3.55□□□□□ -1.84
HMGN1P33-201ENST00000432945 C6orf132Q5T0Z8 1188 aa3.55□□□□□ -1.84
HMGN1P33-201ENST00000432945 SPATA31D1Q6ZQQ2 1576 aa3.55□□□□□ -1.84
HMGN1P33-201ENST00000432945 NBPF26B4DH59 902 aa3.54□□□□□ -1.84
HMGN1P33-201ENST00000432945 ITGBL1O95965 494 aaPredicted RBP3.54□□□□□ -1.84
HMGN1P33-201ENST00000432945 KCNC4Q03721 635 aa3.54□□□□□ -1.84
HMGN1P33-201ENST00000432945 EN1Q05925 392 aaPredicted RBP3.54□□□□□ -1.84
HMGN1P33-201ENST00000432945 NBR1Q14596 966 aa3.54□□□□□ -1.84
HMGN1P33-201ENST00000432945 E2F4Q16254 413 aa3.54□□□□□ -1.84
HMGN1P33-201ENST00000432945 ZFRQ96KR1 1074 aaKnown RBP3.54□□□□□ -1.84
HMGN1P33-201ENST00000432945 IRX2Q9BZI1 471 aaPredicted RBP3.54□□□□□ -1.84
HMGN1P33-201ENST00000432945 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.54□□□□□ -1.84
HMGN1P33-201ENST00000432945 KIAA1468Q9P260 1216 aa3.54□□□□□ -1.84
HMGN1P33-201ENST00000432945 TSR3Q9UJK0 312 aaKnown RBP3.54□□□□□ -1.84
HMGN1P33-201ENST00000432945 PROX2Q3B8N5 592 aa3.53□□□□□ -1.84
HMGN1P33-201ENST00000432945 RBM33Q96EV2 1170 aaKnown RBP3.53□□□□□ -1.84
HMGN1P33-201ENST00000432945 ERCC6L2Q5T890 1561 aa3.53□□□□□ -1.84
HMGN1P33-201ENST00000432945 COL9A1P20849 921 aa3.52□□□□□ -1.85
HMGN1P33-201ENST00000432945 PPP4CP60510 307 aa3.52□□□□□ -1.85
HMGN1P33-201ENST00000432945 LAPTM4AQ15012 233 aa3.52□□□□□ -1.85
HMGN1P33-201ENST00000432945 CADPS2Q86UW7 1296 aa3.52□□□□□ -1.85
HMGN1P33-201ENST00000432945 DDX12PQ92771 950 aa3.52□□□□□ -1.85
HMGN1P33-201ENST00000432945 RBM27Q9P2N5 1060 aaKnown RBP3.52□□□□□ -1.85
HMGN1P33-201ENST00000432945 ARIH1Q9Y4X5 557 aaPredicted RBP3.52□□□□□ -1.85
HMGN1P33-201ENST00000432945 BCAMP50895 628 aa3.51□□□□□ -1.85
HMGN1P33-201ENST00000432945 PRR14Q9BWN1 585 aa3.51□□□□□ -1.85
HMGN1P33-201ENST00000432945 SEPT9Q9UHD8 586 aaPredicted RBP3.51□□□□□ -1.85
HMGN1P33-201ENST00000432945 HPS5Q9UPZ3 1129 aa3.51□□□□□ -1.85
HMGN1P33-201ENST00000432945 GGCXP38435 758 aa3.5□□□□□ -1.85
HMGN1P33-201ENST00000432945 PRSS12P56730 875 aa3.5□□□□□ -1.85
HMGN1P33-201ENST00000432945 CFAP44Q96MT7 982 aa3.5□□□□□ -1.85
HMGN1P33-201ENST00000432945 PAXIP1Q6ZW49 1069 aaPredicted RBP3.49□□□□□ -1.85
HMGN1P33-201ENST00000432945 SLF2Q8IX21 1173 aa3.49□□□□□ -1.85
HMGN1P33-201ENST00000432945 CDCA7LQ96GN5 454 aa3.49□□□□□ -1.85
HMGN1P33-201ENST00000432945 WBP1LQ9NX94 342 aa3.49□□□□□ -1.85
HMGN1P33-201ENST00000432945 GRXCR2A6NFK2 248 aa3.48□□□□□ -1.85
HMGN1P33-201ENST00000432945 P3H3Q8IVL6 736 aa3.48□□□□□ -1.85
HMGN1P33-201ENST00000432945 RNF40O75150 1001 aa3.47□□□□□ -1.85
HMGN1P33-201ENST00000432945 TSR1Q2NL82 804 aaKnown RBP3.47□□□□□ -1.85
HMGN1P33-201ENST00000432945 TATDN2Q93075 761 aa3.47□□□□□ -1.85
HMGN1P33-201ENST00000432945 IL21Q9HBE4 155 aa3.47□□□□□ -1.85
HMGN1P33-201ENST00000432945 TSKSQ9UJT2 592 aa3.47□□□□□ -1.85
HMGN1P33-201ENST00000432945 PNMA3Q9UL41 463 aa3.47□□□□□ -1.85
HMGN1P33-201ENST00000432945 Q6ZNB5 142 aa3.46□□□□□ -1.86
HMGN1P33-201ENST00000432945 SAMD7Q7Z3H4 446 aa3.46□□□□□ -1.86
HMGN1P33-201ENST00000432945 RSPH4AQ5TD94 716 aa3.45□□□□□ -1.86
HMGN1P33-201ENST00000432945 ARHGEF1Q92888 912 aaKnown RBP3.45□□□□□ -1.86
HMGN1P33-201ENST00000432945 V9GY48 417 aaPredicted RBP3.45□□□□□ -1.86
HMGN1P33-201ENST00000432945 KMT5BQ4FZB7 885 aa3.44□□□□□ -1.86
HMGN1P33-201ENST00000432945 NUDT18Q6ZVK8 323 aa3.44□□□□□ -1.86
HMGN1P33-201ENST00000432945 RBM46Q8TBY0 533 aaKnown RBP3.44□□□□□ -1.86
HMGN1P33-201ENST00000432945 MTRQ99707 1265 aa3.44□□□□□ -1.86
HMGN1P33-201ENST00000432945 TMUB1Q9BVT8 246 aa3.44□□□□□ -1.86
HMGN1P33-201ENST00000432945 NRG2O14511 850 aaPredicted RBP3.43□□□□□ -1.86
HMGN1P33-201ENST00000432945 OSBPP22059 807 aa3.43□□□□□ -1.86
HMGN1P33-201ENST00000432945 DNAJB2P25686 324 aa3.43□□□□□ -1.86
HMGN1P33-201ENST00000432945 SMYD5Q6GMV2 418 aa3.43□□□□□ -1.86
HMGN1P33-201ENST00000432945 UNC79Q9P2D8 2635 aa3.43□□□□□ -1.86
HMGN1P33-201ENST00000432945 SMAPO00193 183 aa3.42□□□□□ -1.86
HMGN1P33-201ENST00000432945 TJAP1Q5JTD0 557 aa3.42□□□□□ -1.86
HMGN1P33-201ENST00000432945 PRKD2Q9BZL6 878 aa3.42□□□□□ -1.86
HMGN1P33-201ENST00000432945 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.42□□□□□ -1.86
HMGN1P33-201ENST00000432945 SRCAPQ6ZRS2 3230 aa3.42□□□□□ -1.86
HMGN1P33-201ENST00000432945 GFRA3O60609 400 aa3.41□□□□□ -1.86
HMGN1P33-201ENST00000432945 SWT1Q5T5J6 900 aaKnown RBP3.41□□□□□ -1.86
HMGN1P33-201ENST00000432945 PADI6Q6TGC4 694 aa3.41□□□□□ -1.86
HMGN1P33-201ENST00000432945 TTC13Q8NBP0 860 aa3.41□□□□□ -1.86
HMGN1P33-201ENST00000432945 RTN4Q9NQC3 1192 aaKnown RBP3.41□□□□□ -1.86
HMGN1P33-201ENST00000432945 PCDHB3Q9Y5E6 796 aa3.41□□□□□ -1.86
HMGN1P33-201ENST00000432945 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.4□□□□□ -1.87
HMGN1P33-201ENST00000432945 FCHSD2O94868 740 aa3.4□□□□□ -1.87
HMGN1P33-201ENST00000432945 OATP04181 439 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms