RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 CNGB1Q14028 1251 aaPredicted RBP20.36■□□□□ 0.85
RFTN1-203ENST00000432519 DUOX2Q9NRD8 1548 aa20.36■□□□□ 0.85
RFTN1-203ENST00000432519 WDR7Q9Y4E6 1490 aa20.35■□□□□ 0.85
RFTN1-203ENST00000432519 CCDC144AA2RUR9 1427 aa20.35■□□□□ 0.85
RFTN1-203ENST00000432519 IQGAP3Q86VI3 1631 aa20.33■□□□□ 0.85
RFTN1-203ENST00000432519 ST20-MTHFSA0A0A6YYL1 179 aa20.32■□□□□ 0.84
RFTN1-203ENST00000432519 SPAG9O60271 1321 aaKnown RBP20.32■□□□□ 0.84
RFTN1-203ENST00000432519 HNRNPUQ00839 825 aaKnown RBP eCLIP20.31■□□□□ 0.84
RFTN1-203ENST00000432519 ERBINQ96RT1 1412 aa20.31■□□□□ 0.84
RFTN1-203ENST00000432519 MAGI2Q86UL8 1455 aa20.3■□□□□ 0.84
RFTN1-203ENST00000432519 NBPF1Q3BBV0 1214 aa20.3■□□□□ 0.84
RFTN1-203ENST00000432519 DHX29Q7Z478 1369 aaKnown RBP20.29■□□□□ 0.84
RFTN1-203ENST00000432519 FANCAO15360 1455 aa20.28■□□□□ 0.84
RFTN1-203ENST00000432519 A2MP01023 1474 aa20.28■□□□□ 0.84
RFTN1-203ENST00000432519 ZFYVE16Q7Z3T8 1539 aa20.28■□□□□ 0.84
RFTN1-203ENST00000432519 ASXL2Q76L83 1435 aa20.28■□□□□ 0.84
RFTN1-203ENST00000432519 PRAG1Q86YV5 1406 aa20.27■□□□□ 0.84
RFTN1-203ENST00000432519 ROCK2O75116 1388 aaKnown RBP20.27■□□□□ 0.84
RFTN1-203ENST00000432519 BCANQ96GW7 911 aa20.27■□□□□ 0.83
RFTN1-203ENST00000432519 FAM9BQ8IZU0 186 aa20.26■□□□□ 0.83
RFTN1-203ENST00000432519 FKBP8Q14318 412 aa20.25■□□□□ 0.83
RFTN1-203ENST00000432519 OSCARQ8IYS5 282 aa20.25■□□□□ 0.83
RFTN1-203ENST00000432519 MRS2Q9HD23 443 aa20.25■□□□□ 0.83
RFTN1-203ENST00000432519 ARAP3Q8WWN8 1544 aa20.25■□□□□ 0.83
RFTN1-203ENST00000432519 ABCA9Q8IUA7 1624 aa20.25■□□□□ 0.83
RFTN1-203ENST00000432519 TRPM1Q7Z4N2 1603 aa20.23■□□□□ 0.83
RFTN1-203ENST00000432519 SCAPERQ9BY12 1400 aa20.22■□□□□ 0.83
RFTN1-203ENST00000432519 RTEL1-TNFRSF6BF6WH68 1400 aa20.21■□□□□ 0.83
RFTN1-203ENST00000432519 ADGRL1O94910 1474 aa20.21■□□□□ 0.83
RFTN1-203ENST00000432519 ATP10AO60312 1499 aa20.2■□□□□ 0.82
RFTN1-203ENST00000432519 MYT1LQ9UL68 1186 aa20.2■□□□□ 0.82
RFTN1-203ENST00000432519 E9PCH4 1651 aa20.2■□□□□ 0.82
RFTN1-203ENST00000432519 ATP7AQ04656 1500 aa20.19■□□□□ 0.82
RFTN1-203ENST00000432519 INO80Q9ULG1 1556 aaPredicted RBP20.18■□□□□ 0.82
RFTN1-203ENST00000432519 KIF3BO15066 747 aa20.17■□□□□ 0.82
RFTN1-203ENST00000432519 ARID4BQ4LE39 1312 aaPredicted RBP20.16■□□□□ 0.82
RFTN1-203ENST00000432519 PELP1Q8IZL8 1130 aaKnown RBP20.14■□□□□ 0.82
RFTN1-203ENST00000432519 SENP3-EIF4A1A0A087X0R7 540 aa20.13■□□□□ 0.81
RFTN1-203ENST00000432519 GPRASP1Q5JY77 1395 aa20.13■□□□□ 0.81
RFTN1-203ENST00000432519 DEPDC5O75140 1603 aa20.13■□□□□ 0.81
RFTN1-203ENST00000432519 NPM1P06748 294 aaKnown RBP eCLIP20.1■□□□□ 0.81
RFTN1-203ENST00000432519 TESK2Q96S53 571 aa20.1■□□□□ 0.81
RFTN1-203ENST00000432519 KIDINS220Q9ULH0 1771 aa20.09■□□□□ 0.81
RFTN1-203ENST00000432519 MROH1Q8NDA8 1641 aa20.09■□□□□ 0.81
RFTN1-203ENST00000432519 DISP3Q9P2K9 1392 aa20.09■□□□□ 0.81
RFTN1-203ENST00000432519 CLTCL1P53675 1640 aa20.09■□□□□ 0.81
RFTN1-203ENST00000432519 PRDM15P57071 1507 aaPredicted RBP20.08■□□□□ 0.81
RFTN1-203ENST00000432519 PTPRTO14522 1441 aa20.08■□□□□ 0.81
RFTN1-203ENST00000432519 IRX6P78412 446 aaPredicted RBP20.08■□□□□ 0.81
RFTN1-203ENST00000432519 TRPM2O94759 1503 aa20.08■□□□□ 0.81
RFTN1-203ENST00000432519 SPHKAPQ2M3C7 1700 aa20.07■□□□□ 0.8
RFTN1-203ENST00000432519 VWDEQ8N2E2 1590 aa20.07■□□□□ 0.8
RFTN1-203ENST00000432519 UGGT1Q9NYU2 1555 aa20.07■□□□□ 0.8
RFTN1-203ENST00000432519 CD109Q6YHK3 1445 aa20.06■□□□□ 0.8
RFTN1-203ENST00000432519 TET3O43151 1660 aa20.06■□□□□ 0.8
RFTN1-203ENST00000432519 NEFLP07196 543 aa20.05■□□□□ 0.8
RFTN1-203ENST00000432519 MADDQ8WXG6 1647 aa20.03■□□□□ 0.8
RFTN1-203ENST00000432519 ZBED9Q6R2W3 1325 aa20.02■□□□□ 0.8
RFTN1-203ENST00000432519 EIF2AK4Q9P2K8 1649 aaKnown RBP20.02■□□□□ 0.8
RFTN1-203ENST00000432519 KANK1Q14678 1352 aa20.02■□□□□ 0.8
RFTN1-203ENST00000432519 CEP152O94986 1710 aa20.02■□□□□ 0.8
RFTN1-203ENST00000432519 COL17A1Q9UMD9 1497 aaPredicted RBP20.02■□□□□ 0.8
RFTN1-203ENST00000432519 LAMC1P11047 1609 aa20.02■□□□□ 0.8
RFTN1-203ENST00000432519 ZNF518AQ6AHZ1 1483 aa20.02■□□□□ 0.79
RFTN1-203ENST00000432519 PER1O15534 1290 aaPredicted RBP20.01■□□□□ 0.79
RFTN1-203ENST00000432519 RNF17Q9BXT8 1623 aaKnown RBP20.01■□□□□ 0.79
RFTN1-203ENST00000432519 PNISRQ8TF01 805 aaKnown RBP20■□□□□ 0.79
RFTN1-203ENST00000432519 RAPGEF3O95398 923 aa19.99■□□□□ 0.79
RFTN1-203ENST00000432519 TMC1Q8TDI8 760 aa19.98■□□□□ 0.79
RFTN1-203ENST00000432519 POGZQ7Z3K3 1410 aa19.98■□□□□ 0.79
RFTN1-203ENST00000432519 FRMPD1Q5SYB0 1578 aa19.97■□□□□ 0.79
RFTN1-203ENST00000432519 PPRC1Q5VV67 1664 aaKnown RBP19.97■□□□□ 0.79
RFTN1-203ENST00000432519 CFAP65Q6ZU64 1925 aaKnown RBP19.96■□□□□ 0.79
RFTN1-203ENST00000432519 GGT6Q6P531 493 aa19.96■□□□□ 0.79
RFTN1-203ENST00000432519 TSHZ2Q9NRE2 1034 aa19.96■□□□□ 0.79
RFTN1-203ENST00000432519 PANK3Q9H999 370 aa19.95■□□□□ 0.78
RFTN1-203ENST00000432519 EFCAB6Q5THR3 1501 aa19.95■□□□□ 0.78
RFTN1-203ENST00000432519 MYBBP1AQ9BQG0 1328 aaKnown RBP19.95■□□□□ 0.78
RFTN1-203ENST00000432519 CC2D1BQ5T0F9 858 aaKnown RBP19.94■□□□□ 0.78
RFTN1-203ENST00000432519 ADGRF5Q8IZF2 1346 aa19.93■□□□□ 0.78
RFTN1-203ENST00000432519 TMF1P82094 1093 aa19.93■□□□□ 0.78
RFTN1-203ENST00000432519 IQGAP1P46940 1657 aa19.93■□□□□ 0.78
RFTN1-203ENST00000432519 RALBP1Q15311 655 aa19.92■□□□□ 0.78
RFTN1-203ENST00000432519 CFAP70Q5T0N1 1121 aa19.92■□□□□ 0.78
RFTN1-203ENST00000432519 CYB5RLQ6IPT4 315 aa19.92■□□□□ 0.78
RFTN1-203ENST00000432519 PARD3Q8TEW0 1356 aa19.92■□□□□ 0.78
RFTN1-203ENST00000432519 MLH3Q9UHC1 1453 aa19.9■□□□□ 0.78
RFTN1-203ENST00000432519 ABCA6Q8N139 1617 aa19.9■□□□□ 0.78
RFTN1-203ENST00000432519 MROH2AA6NES4 1674 aa19.9■□□□□ 0.78
RFTN1-203ENST00000432519 HECW2Q9P2P5 1572 aa19.89■□□□□ 0.77
RFTN1-203ENST00000432519 BRD4O60885 1362 aaPredicted RBP19.89■□□□□ 0.77
RFTN1-203ENST00000432519 KTN1Q86UP2 1357 aaKnown RBP19.89■□□□□ 0.77
RFTN1-203ENST00000432519 NPATQ14207 1427 aa19.89■□□□□ 0.77
RFTN1-203ENST00000432519 LRPPRCP42704 1394 aaKnown RBP19.88■□□□□ 0.77
RFTN1-203ENST00000432519 SCAF11Q99590 1463 aaKnown RBP19.88■□□□□ 0.77
RFTN1-203ENST00000432519 CFAP74Q9C0B2 1584 aa19.87■□□□□ 0.77
RFTN1-203ENST00000432519 CHGAP10645 457 aaKnown RBP19.87■□□□□ 0.77
RFTN1-203ENST00000432519 LMTK2Q8IWU2 1503 aa19.86■□□□□ 0.77
RFTN1-203ENST00000432519 KIF1BO60333 1816 aa19.85■□□□□ 0.77
RFTN1-203ENST00000432519 NLRP13Q86W25 1043 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms