RNA–Protein interactions for RNA: ENST00000432289.5

CCDC196-204, Transcript of coiled-coil domain containing 196, humanhuman

TSL 3

Gene CCDC196, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-204ENST00000432289 TYW1BQ6NUM6 668 aa13.3□□□□□ -0.28
CCDC196-204ENST00000432289 ZBED2Q9BTP6 218 aa13.3□□□□□ -0.28
CCDC196-204ENST00000432289 WDR70Q9NW82 654 aa13.29□□□□□ -0.28
CCDC196-204ENST00000432289 EPAS1Q99814 870 aa13.27□□□□□ -0.29
CCDC196-204ENST00000432289 NACADO15069 1562 aa13.27□□□□□ -0.29
CCDC196-204ENST00000432289 SPDYE16A6NNV3 312 aaPredicted RBP13.26□□□□□ -0.29
CCDC196-204ENST00000432289 BHMG1C9JSJ3 638 aaPredicted RBP13.25□□□□□ -0.29
CCDC196-204ENST00000432289 TSHZ2Q9NRE2 1034 aa13.25□□□□□ -0.29
CCDC196-204ENST00000432289 PPP1R3GB7ZBB8 358 aa13.24□□□□□ -0.29
CCDC196-204ENST00000432289 DDX12PQ92771 950 aa13.23□□□□□ -0.29
CCDC196-204ENST00000432289 COL9A1P20849 921 aa13.21□□□□□ -0.29
CCDC196-204ENST00000432289 STAC3Q96MF2 364 aa13.21□□□□□ -0.29
CCDC196-204ENST00000432289 C6orf132Q5T0Z8 1188 aa13.2□□□□□ -0.3
CCDC196-204ENST00000432289 RB1CC1Q8TDY2 1594 aa13.2□□□□□ -0.3
CCDC196-204ENST00000432289 HCSTQ9UBK5 93 aa13.19□□□□□ -0.3
CCDC196-204ENST00000432289 KCTD12Q96CX2 325 aaKnown RBP13.16□□□□□ -0.3
CCDC196-204ENST00000432289 EN1Q05925 392 aaPredicted RBP13.15□□□□□ -0.3
CCDC196-204ENST00000432289 NBR1Q14596 966 aa13.15□□□□□ -0.3
CCDC196-204ENST00000432289 PROX2Q3B8N5 592 aa13.15□□□□□ -0.3
CCDC196-204ENST00000432289 RABGEF1Q9UJ41 708 aa13.15□□□□□ -0.3
CCDC196-204ENST00000432289 RBM33Q96EV2 1170 aaKnown RBP13.14□□□□□ -0.31
CCDC196-204ENST00000432289 NBPF3Q9H094 633 aa13.14□□□□□ -0.31
CCDC196-204ENST00000432289 MRPL50Q8N5N7 158 aaKnown RBP13.13□□□□□ -0.31
CCDC196-204ENST00000432289 ONECUT3O60422 494 aaPredicted RBP13.12□□□□□ -0.31
CCDC196-204ENST00000432289 MAP3K7O43318 606 aa13.09□□□□□ -0.31
CCDC196-204ENST00000432289 PRIM1P49642 420 aaKnown RBP13.08□□□□□ -0.32
CCDC196-204ENST00000432289 PLCB2Q00722 1185 aa13.08□□□□□ -0.32
CCDC196-204ENST00000432289 TSR1Q2NL82 804 aaKnown RBP13.08□□□□□ -0.32
CCDC196-204ENST00000432289 GRXCR2A6NFK2 248 aa13.07□□□□□ -0.32
CCDC196-204ENST00000432289 THSD4Q6ZMP0 1018 aa13.07□□□□□ -0.32
CCDC196-204ENST00000432289 ARHGEF1Q92888 912 aaKnown RBP13.07□□□□□ -0.32
CCDC196-204ENST00000432289 SHROOM4Q9ULL8 1493 aa13.07□□□□□ -0.32
CCDC196-204ENST00000432289 TRIM6-TRIM34B2RNG4 842 aa13.06□□□□□ -0.32
CCDC196-204ENST00000432289 OSBPP22059 807 aa13.06□□□□□ -0.32
CCDC196-204ENST00000432289 KIAA1468Q9P260 1216 aa13.06□□□□□ -0.32
CCDC196-204ENST00000432289 GOLGA8CPA6NN73 597 aa13.05□□□□□ -0.32
CCDC196-204ENST00000432289 LAPTM4BQ86VI4 370 aa13.05□□□□□ -0.32
CCDC196-204ENST00000432289 KCNV2Q8TDN2 545 aa13.05□□□□□ -0.32
CCDC196-204ENST00000432289 WNT2BQ93097 391 aa13.05□□□□□ -0.32
CCDC196-204ENST00000432289 SCRIBQ14160 1630 aa13.04□□□□□ -0.32
CCDC196-204ENST00000432289 PTPN5P54829 565 aa13.01□□□□□ -0.33
CCDC196-204ENST00000432289 CERKQ8TCT0 537 aa13□□□□□ -0.33
CCDC196-204ENST00000432289 PLA2G2EQ9NZK7 142 aa13□□□□□ -0.33
CCDC196-204ENST00000432289 TSKSQ9UJT2 592 aa12.99□□□□□ -0.33
CCDC196-204ENST00000432289 UNC13AQ9UPW8 1703 aa12.98□□□□□ -0.33
CCDC196-204ENST00000432289 ANKK1Q8NFD2 765 aa12.97□□□□□ -0.33
CCDC196-204ENST00000432289 ZFRQ96KR1 1074 aaKnown RBP12.97□□□□□ -0.33
CCDC196-204ENST00000432289 SEPT9Q9UHD8 586 aaPredicted RBP12.97□□□□□ -0.33
CCDC196-204ENST00000432289 PRSS12P56730 875 aa12.96□□□□□ -0.33
CCDC196-204ENST00000432289 FAM98CQ17RN3 349 aaKnown RBP12.96□□□□□ -0.33
CCDC196-204ENST00000432289 CDCA7LQ96GN5 454 aa12.96□□□□□ -0.33
CCDC196-204ENST00000432289 PACS2Q86VP3 889 aa12.95□□□□□ -0.34
CCDC196-204ENST00000432289 P3H3Q8IVL6 736 aa12.95□□□□□ -0.34
CCDC196-204ENST00000432289 CDHR5Q9HBB8 845 aa12.94□□□□□ -0.34
CCDC196-204ENST00000432289 SOWAHBA6NEL2 793 aa12.93□□□□□ -0.34
CCDC196-204ENST00000432289 MLLT3P42568 568 aaPredicted RBP12.93□□□□□ -0.34
CCDC196-204ENST00000432289 FAM198AQ9UFP1 575 aa12.93□□□□□ -0.34
CCDC196-204ENST00000432289 RBM27Q9P2N5 1060 aaKnown RBP12.92□□□□□ -0.34
CCDC196-204ENST00000432289 NPDC1Q9NQX5 325 aaPredicted RBP12.91□□□□□ -0.34
CCDC196-204ENST00000432289 BCAMP50895 628 aa12.9□□□□□ -0.34
CCDC196-204ENST00000432289 C3orf80F5H4A9 247 aa12.87□□□□□ -0.35
CCDC196-204ENST00000432289 TTC13Q8NBP0 860 aa12.87□□□□□ -0.35
CCDC196-204ENST00000432289 IFFO2Q5TF58 517 aa12.86□□□□□ -0.35
CCDC196-204ENST00000432289 TATDN2Q93075 761 aa12.85□□□□□ -0.35
CCDC196-204ENST00000432289 NBPF26B4DH59 902 aa12.84□□□□□ -0.35
CCDC196-204ENST00000432289 NYAP1Q6ZVC0 841 aa12.84□□□□□ -0.35
CCDC196-204ENST00000432289 SMAPO00193 183 aa12.83□□□□□ -0.36
CCDC196-204ENST00000432289 LRCH3Q96II8 777 aa12.83□□□□□ -0.36
CCDC196-204ENST00000432289 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.83□□□□□ -0.36
CCDC196-204ENST00000432289 WBP1LQ9NX94 342 aa12.82□□□□□ -0.36
CCDC196-204ENST00000432289 SEMA3EO15041 775 aa12.81□□□□□ -0.36
CCDC196-204ENST00000432289 PNMA3Q9UL41 463 aa12.81□□□□□ -0.36
CCDC196-204ENST00000432289 PADI6Q6TGC4 694 aa12.8□□□□□ -0.36
CCDC196-204ENST00000432289 TSR3Q9UJK0 312 aaKnown RBP12.8□□□□□ -0.36
CCDC196-204ENST00000432289 HAP1P54257 671 aaPredicted RBP12.79□□□□□ -0.36
CCDC196-204ENST00000432289 PTGDRQ13258 359 aa12.79□□□□□ -0.36
CCDC196-204ENST00000432289 NUDT18Q6ZVK8 323 aa12.79□□□□□ -0.36
CCDC196-204ENST00000432289 ITGBL1O95965 494 aaPredicted RBP12.78□□□□□ -0.36
CCDC196-204ENST00000432289 HPS5Q9UPZ3 1129 aa12.78□□□□□ -0.36
CCDC196-204ENST00000432289 SAMD7Q7Z3H4 446 aa12.77□□□□□ -0.37
CCDC196-204ENST00000432289 KDM2AQ9Y2K7 1162 aa12.76□□□□□ -0.37
CCDC196-204ENST00000432289 TESPA1A2RU30 521 aaPredicted RBP12.74□□□□□ -0.37
CCDC196-204ENST00000432289 EYA1Q99502 592 aa12.73□□□□□ -0.37
CCDC196-204ENST00000432289 PPP4CP60510 307 aa12.71□□□□□ -0.37
CCDC196-204ENST00000432289 BICRAQ9NZM4 1560 aa12.71□□□□□ -0.37
CCDC196-204ENST00000432289 A0A0G2JS52 829 aa12.7□□□□□ -0.38
CCDC196-204ENST00000432289 NUTM2FA1L443 756 aa12.7□□□□□ -0.38
CCDC196-204ENST00000432289 HDGFP51858 240 aaKnown RBP12.67□□□□□ -0.38
CCDC196-204ENST00000432289 FCHSD2O94868 740 aa12.66□□□□□ -0.38
CCDC196-204ENST00000432289 RGS20O76081 388 aa12.65□□□□□ -0.38
CCDC196-204ENST00000432289 KCNC4Q03721 635 aa12.65□□□□□ -0.38
CCDC196-204ENST00000432289 SWT1Q5T5J6 900 aaKnown RBP12.65□□□□□ -0.38
CCDC196-204ENST00000432289 SMYD5Q6GMV2 418 aa12.65□□□□□ -0.38
CCDC196-204ENST00000432289 VSIG10Q8N0Z9 540 aa12.65□□□□□ -0.38
CCDC196-204ENST00000432289 ADGRG1Q9Y653 693 aa12.65□□□□□ -0.38
CCDC196-204ENST00000432289 RBM26Q5T8P6 1007 aaKnown RBP12.62□□□□□ -0.39
CCDC196-204ENST00000432289 SLF2Q8IX21 1173 aa12.61□□□□□ -0.39
CCDC196-204ENST00000432289 RBM46Q8TBY0 533 aaKnown RBP12.61□□□□□ -0.39
CCDC196-204ENST00000432289 HIC1Q14526 733 aa12.6□□□□□ -0.39
CCDC196-204ENST00000432289 TJAP1Q5JTD0 557 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms