RNA–Protein interactions for RNA: ENST00000431737.1

LINC00840-201, long intergenic non-protein coding RNA 840, humanhuman

TSL 2 BASIC

Gene LINC00840, Length 1,974 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00840-201ENST00000431737 KIDINS220Q9ULH0 1771 aa17.83■□□□□ 0.44
LINC00840-201ENST00000431737 E9PCH4 1651 aa17.82■□□□□ 0.44
LINC00840-201ENST00000431737 PRDM15P57071 1507 aaPredicted RBP17.82■□□□□ 0.44
LINC00840-201ENST00000431737 CCDC144AA2RUR9 1427 aa17.81■□□□□ 0.44
LINC00840-201ENST00000431737 SCAPERQ9BY12 1400 aa17.81■□□□□ 0.44
LINC00840-201ENST00000431737 YTHDC1Q96MU7 727 aaKnown RBP17.8■□□□□ 0.44
LINC00840-201ENST00000431737 WASHC2AQ641Q2 1341 aa17.8■□□□□ 0.44
LINC00840-201ENST00000431737 ZNF518AQ6AHZ1 1483 aa17.8■□□□□ 0.44
LINC00840-201ENST00000431737 NPM1P06748 294 aaKnown RBP eCLIP17.8■□□□□ 0.44
LINC00840-201ENST00000431737 MROH1Q8NDA8 1641 aa17.79■□□□□ 0.44
LINC00840-201ENST00000431737 LAMC1P11047 1609 aa17.79■□□□□ 0.44
LINC00840-201ENST00000431737 TRPM1Q7Z4N2 1603 aa17.78■□□□□ 0.44
LINC00840-201ENST00000431737 SPHKAPQ2M3C7 1700 aa17.78■□□□□ 0.44
LINC00840-201ENST00000431737 CCER2I3L3R5 266 aa17.78■□□□□ 0.44
LINC00840-201ENST00000431737 BCORL1Q5H9F3 1711 aa17.78■□□□□ 0.44
LINC00840-201ENST00000431737 AFAP1Q8N556 730 aa17.78■□□□□ 0.44
LINC00840-201ENST00000431737 CCDC7Q96M83 1385 aa17.78■□□□□ 0.44
LINC00840-201ENST00000431737 TRPM2O94759 1503 aa17.77■□□□□ 0.44
LINC00840-201ENST00000431737 CNTLNQ9NXG0 1405 aa17.77■□□□□ 0.44
LINC00840-201ENST00000431737 RNF17Q9BXT8 1623 aaKnown RBP17.77■□□□□ 0.44
LINC00840-201ENST00000431737 CD109Q6YHK3 1445 aa17.76■□□□□ 0.43
LINC00840-201ENST00000431737 POGZQ7Z3K3 1410 aa17.76■□□□□ 0.43
LINC00840-201ENST00000431737 CEP152O94986 1710 aa17.76■□□□□ 0.43
LINC00840-201ENST00000431737 NEO1Q92859 1461 aa17.75■□□□□ 0.43
LINC00840-201ENST00000431737 MAP3K4Q9Y6R4 1608 aa17.74■□□□□ 0.43
LINC00840-201ENST00000431737 DHX29Q7Z478 1369 aaKnown RBP17.74■□□□□ 0.43
LINC00840-201ENST00000431737 NEURL4Q96JN8 1562 aa17.74■□□□□ 0.43
LINC00840-201ENST00000431737 HECW2Q9P2P5 1572 aa17.74■□□□□ 0.43
LINC00840-201ENST00000431737 A2MP01023 1474 aa17.74■□□□□ 0.43
LINC00840-201ENST00000431737 PTPRTO14522 1441 aa17.74■□□□□ 0.43
LINC00840-201ENST00000431737 GLI2P10070 1586 aa17.74■□□□□ 0.43
LINC00840-201ENST00000431737 USP47Q96K76 1375 aa17.74■□□□□ 0.43
LINC00840-201ENST00000431737 MLH3Q9UHC1 1453 aa17.73■□□□□ 0.43
LINC00840-201ENST00000431737 ANP32CO43423 234 aa17.73■□□□□ 0.43
LINC00840-201ENST00000431737 PRAG1Q86YV5 1406 aa17.73■□□□□ 0.43
LINC00840-201ENST00000431737 LMTK2Q8IWU2 1503 aa17.71■□□□□ 0.43
LINC00840-201ENST00000431737 RIMBP3CA6NJZ7 1639 aa17.71■□□□□ 0.43
LINC00840-201ENST00000431737 RIMBP3BA6NNM3 1639 aa17.71■□□□□ 0.43
LINC00840-201ENST00000431737 RIMBP3Q9UFD9 1639 aa17.71■□□□□ 0.43
LINC00840-201ENST00000431737 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.71■□□□□ 0.43
LINC00840-201ENST00000431737 ARID4BQ4LE39 1312 aaPredicted RBP17.7■□□□□ 0.42
LINC00840-201ENST00000431737 EFCAB6Q5THR3 1501 aa17.69■□□□□ 0.42
LINC00840-201ENST00000431737 FRMPD1Q5SYB0 1578 aa17.69■□□□□ 0.42
LINC00840-201ENST00000431737 GPRASP1Q5JY77 1395 aa17.69■□□□□ 0.42
LINC00840-201ENST00000431737 CLTCL1P53675 1640 aa17.69■□□□□ 0.42
LINC00840-201ENST00000431737 C11orf95C9JLR9 678 aaPredicted RBP17.68■□□□□ 0.42
LINC00840-201ENST00000431737 KANK1Q14678 1352 aa17.68■□□□□ 0.42
LINC00840-201ENST00000431737 RICTORQ6R327 1708 aa17.67■□□□□ 0.42
LINC00840-201ENST00000431737 KIF7Q2M1P5 1343 aa17.67■□□□□ 0.42
LINC00840-201ENST00000431737 ABCA6Q8N139 1617 aa17.67■□□□□ 0.42
LINC00840-201ENST00000431737 MADDQ8WXG6 1647 aa17.65■□□□□ 0.42
LINC00840-201ENST00000431737 PPRC1Q5VV67 1664 aaKnown RBP17.65■□□□□ 0.42
LINC00840-201ENST00000431737 DCAF11Q8TEB1 546 aa17.65■□□□□ 0.42
LINC00840-201ENST00000431737 GTF3C3Q9Y5Q9 886 aa17.64■□□□□ 0.41
LINC00840-201ENST00000431737 ZNF326Q5BKZ1 582 aaKnown RBP17.62■□□□□ 0.41
LINC00840-201ENST00000431737 DIP2CQ9Y2E4 1556 aa17.61■□□□□ 0.41
LINC00840-201ENST00000431737 CARD11Q9BXL7 1154 aa17.61■□□□□ 0.41
LINC00840-201ENST00000431737 KIAA1210Q9ULL0 1709 aa17.61■□□□□ 0.41
LINC00840-201ENST00000431737 DIP2BQ9P265 1576 aa17.61■□□□□ 0.41
LINC00840-201ENST00000431737 ROCK2O75116 1388 aaKnown RBP17.61■□□□□ 0.41
LINC00840-201ENST00000431737 KIF1BO60333 1816 aa17.6■□□□□ 0.41
LINC00840-201ENST00000431737 IFT172Q9UG01 1749 aa17.6■□□□□ 0.41
LINC00840-201ENST00000431737 STAC3Q96MF2 364 aa17.59■□□□□ 0.41
LINC00840-201ENST00000431737 KIF3BO15066 747 aa17.59■□□□□ 0.41
LINC00840-201ENST00000431737 IQGAP1P46940 1657 aa17.58■□□□□ 0.41
LINC00840-201ENST00000431737 ZMYM4Q5VZL5 1548 aa17.57■□□□□ 0.4
LINC00840-201ENST00000431737 KDM2AQ9Y2K7 1162 aa17.57■□□□□ 0.4
LINC00840-201ENST00000431737 ZC3H13Q5T200 1668 aaKnown RBP17.57■□□□□ 0.4
LINC00840-201ENST00000431737 MYOM2P54296 1465 aa17.55■□□□□ 0.4
LINC00840-201ENST00000431737 ABCC3O15438 1527 aa17.55■□□□□ 0.4
LINC00840-201ENST00000431737 CAMSAP1Q5T5Y3 1602 aa17.54■□□□□ 0.4
LINC00840-201ENST00000431737 MROH2AA6NES4 1674 aa17.53■□□□□ 0.4
LINC00840-201ENST00000431737 COL17A1Q9UMD9 1497 aaPredicted RBP17.53■□□□□ 0.4
LINC00840-201ENST00000431737 RGL3Q3MIN7 710 aa17.53■□□□□ 0.4
LINC00840-201ENST00000431737 PRKRIP1Q9H875 184 aaPredicted RBP17.53■□□□□ 0.4
LINC00840-201ENST00000431737 ADGRB3O60242 1522 aa17.53■□□□□ 0.4
LINC00840-201ENST00000431737 MYT1LQ9UL68 1186 aa17.52■□□□□ 0.4
LINC00840-201ENST00000431737 ST20-MTHFSA0A0A6YYL1 179 aa17.51■□□□□ 0.39
LINC00840-201ENST00000431737 UGGT1Q9NYU2 1555 aa17.5■□□□□ 0.39
LINC00840-201ENST00000431737 CYB5RLQ6IPT4 315 aa17.49■□□□□ 0.39
LINC00840-201ENST00000431737 NPATQ14207 1427 aa17.49■□□□□ 0.39
LINC00840-201ENST00000431737 REREQ9P2R6 1566 aa17.49■□□□□ 0.39
LINC00840-201ENST00000431737 PIK3C2BO00750 1634 aa17.49■□□□□ 0.39
LINC00840-201ENST00000431737 NRXN1Q9ULB1 1477 aa17.48■□□□□ 0.39
LINC00840-201ENST00000431737 NBPF1Q3BBV0 1214 aa17.48■□□□□ 0.39
LINC00840-201ENST00000431737 PPLO60437 1756 aa17.47■□□□□ 0.39
LINC00840-201ENST00000431737 SIGLEC1Q9BZZ2 1709 aa17.46■□□□□ 0.39
LINC00840-201ENST00000431737 ARHGAP31Q2M1Z3 1444 aa17.46■□□□□ 0.39
LINC00840-201ENST00000431737 SCAF11Q99590 1463 aaKnown RBP17.44■□□□□ 0.38
LINC00840-201ENST00000431737 NOS1P29475 1434 aa17.44■□□□□ 0.38
LINC00840-201ENST00000431737 KTN1Q86UP2 1357 aaKnown RBP17.44■□□□□ 0.38
LINC00840-201ENST00000431737 TESK2Q96S53 571 aa17.44■□□□□ 0.38
LINC00840-201ENST00000431737 RAPGEF3O95398 923 aa17.44■□□□□ 0.38
LINC00840-201ENST00000431737 KIF13AQ9H1H9 1805 aa17.44■□□□□ 0.38
LINC00840-201ENST00000431737 YEATS2Q9ULM3 1422 aa17.42■□□□□ 0.38
LINC00840-201ENST00000431737 SYNMO15061 1565 aa17.42■□□□□ 0.38
LINC00840-201ENST00000431737 MYO3AQ8NEV4 1616 aa17.41■□□□□ 0.38
LINC00840-201ENST00000431737 SETBP1Q9Y6X0 1596 aa17.41■□□□□ 0.38
LINC00840-201ENST00000431737 TSPOAP1O95153 1857 aa17.41■□□□□ 0.38
LINC00840-201ENST00000431737 AGLP35573 1532 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms