RNA–Protein interactions for RNA: ENST00000431020.1

LINC00309-201, long intergenic non-protein coding RNA 309, humanhuman

TSL 1 (best) BASIC

Gene LINC00309, Length 3,307 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00309-201ENST00000431020 ATP10AO60312 1499 aa8.69□□□□□ -1.02
LINC00309-201ENST00000431020 SCAF1Q9H7N4 1312 aaKnown RBP8.69□□□□□ -1.02
LINC00309-201ENST00000431020 NCOA1Q15788 1441 aa8.69□□□□□ -1.02
LINC00309-201ENST00000431020 RAB3GAP2Q9H2M9 1393 aa8.69□□□□□ -1.02
LINC00309-201ENST00000431020 KANK1Q14678 1352 aa8.68□□□□□ -1.02
LINC00309-201ENST00000431020 DHX29Q7Z478 1369 aaKnown RBP8.68□□□□□ -1.02
LINC00309-201ENST00000431020 ATP7AQ04656 1500 aa8.68□□□□□ -1.02
LINC00309-201ENST00000431020 MPHOSPH9Q99550 1183 aa8.68□□□□□ -1.02
LINC00309-201ENST00000431020 KIAA1107Q9UPP5 1409 aa8.68□□□□□ -1.02
LINC00309-201ENST00000431020 ZMYM3Q14202 1370 aa8.67□□□□□ -1.02
LINC00309-201ENST00000431020 ARAP3Q8WWN8 1544 aa8.67□□□□□ -1.02
LINC00309-201ENST00000431020 SLC26A8Q96RN1 970 aa8.67□□□□□ -1.02
LINC00309-201ENST00000431020 ITSN2Q9NZM3 1697 aa8.67□□□□□ -1.02
LINC00309-201ENST00000431020 MAP3K1Q13233 1512 aa8.67□□□□□ -1.02
LINC00309-201ENST00000431020 IDI1Q13907 227 aa8.65□□□□□ -1.02
LINC00309-201ENST00000431020 SAFB2Q14151 953 aaKnown RBP eCLIP8.65□□□□□ -1.02
LINC00309-201ENST00000431020 CNGB1Q14028 1251 aaPredicted RBP8.65□□□□□ -1.02
LINC00309-201ENST00000431020 C14orf37Q86TY3 774 aa8.64□□□□□ -1.03
LINC00309-201ENST00000431020 NCKAP5LQ9HCH0 1330 aa8.64□□□□□ -1.03
LINC00309-201ENST00000431020 STK26Q9P289 416 aa8.64□□□□□ -1.03
LINC00309-201ENST00000431020 RRBP1Q9P2E9 1410 aaKnown RBP8.64□□□□□ -1.03
LINC00309-201ENST00000431020 NUTM2FA1L443 756 aa8.64□□□□□ -1.03
LINC00309-201ENST00000431020 POLR3GLQ9BT43 218 aa8.64□□□□□ -1.03
LINC00309-201ENST00000431020 HECW2Q9P2P5 1572 aa8.63□□□□□ -1.03
LINC00309-201ENST00000431020 SETD5Q9C0A6 1442 aa8.63□□□□□ -1.03
LINC00309-201ENST00000431020 TXNDC2Q86VQ3 553 aa8.63□□□□□ -1.03
LINC00309-201ENST00000431020 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.63□□□□□ -1.03
LINC00309-201ENST00000431020 FRMPD1Q5SYB0 1578 aa8.62□□□□□ -1.03
LINC00309-201ENST00000431020 MLH3Q9UHC1 1453 aa8.62□□□□□ -1.03
LINC00309-201ENST00000431020 KIDINS220Q9ULH0 1771 aa8.62□□□□□ -1.03
LINC00309-201ENST00000431020 NAIPQ13075 1403 aa8.62□□□□□ -1.03
LINC00309-201ENST00000431020 ABCA6Q8N139 1617 aa8.62□□□□□ -1.03
LINC00309-201ENST00000431020 DCAF11Q8TEB1 546 aa8.62□□□□□ -1.03
LINC00309-201ENST00000431020 RICTORQ6R327 1708 aa8.61□□□□□ -1.03
LINC00309-201ENST00000431020 HIRIP3Q9BW71 556 aaPredicted RBP8.61□□□□□ -1.03
LINC00309-201ENST00000431020 CFAP74Q9C0B2 1584 aa8.6□□□□□ -1.03
LINC00309-201ENST00000431020 DIP2CQ9Y2E4 1556 aa8.6□□□□□ -1.03
LINC00309-201ENST00000431020 PTPRMP28827 1452 aa8.59□□□□□ -1.03
LINC00309-201ENST00000431020 TMEM132EQ6IEE7 984 aa8.59□□□□□ -1.04
LINC00309-201ENST00000431020 EID1Q9Y6B2 187 aa8.59□□□□□ -1.04
LINC00309-201ENST00000431020 MADDQ8WXG6 1647 aa8.58□□□□□ -1.04
LINC00309-201ENST00000431020 MAGI2Q86UL8 1455 aa8.58□□□□□ -1.04
LINC00309-201ENST00000431020 RIMS1Q86UR5 1692 aaKnown RBP8.58□□□□□ -1.04
LINC00309-201ENST00000431020 DNMT1P26358 1616 aaKnown RBP8.57□□□□□ -1.04
LINC00309-201ENST00000431020 TCOF1Q13428 1488 aaKnown RBP8.57□□□□□ -1.04
LINC00309-201ENST00000431020 SIGLEC1Q9BZZ2 1709 aa8.57□□□□□ -1.04
LINC00309-201ENST00000431020 RTEL1-TNFRSF6BF6WH68 1400 aa8.57□□□□□ -1.04
LINC00309-201ENST00000431020 PIP4K2BP78356 416 aa8.57□□□□□ -1.04
LINC00309-201ENST00000431020 THEMISQ8N1K5 641 aaPredicted RBP8.57□□□□□ -1.04
LINC00309-201ENST00000431020 ARHGEF40Q8TER5 1519 aa8.57□□□□□ -1.04
LINC00309-201ENST00000431020 TNRQ92752 1358 aa8.57□□□□□ -1.04
LINC00309-201ENST00000431020 LTKP29376 864 aa8.56□□□□□ -1.04
LINC00309-201ENST00000431020 ANKLE2Q86XL3 938 aa8.56□□□□□ -1.04
LINC00309-201ENST00000431020 KDM5CP41229 1560 aa8.56□□□□□ -1.04
LINC00309-201ENST00000431020 DUOX2Q9NRD8 1548 aa8.55□□□□□ -1.04
LINC00309-201ENST00000431020 HFM1A2PYH4 1435 aa8.55□□□□□ -1.04
LINC00309-201ENST00000431020 UGGT1Q9NYU2 1555 aa8.55□□□□□ -1.04
LINC00309-201ENST00000431020 NPATQ14207 1427 aa8.55□□□□□ -1.04
LINC00309-201ENST00000431020 EIF5BO60841 1220 aaKnown RBP8.54□□□□□ -1.04
LINC00309-201ENST00000431020 UHRF1BP1Q6BDS2 1440 aa8.54□□□□□ -1.04
LINC00309-201ENST00000431020 ZNF335Q9H4Z2 1342 aaPredicted RBP8.53□□□□□ -1.04
LINC00309-201ENST00000431020 ARHGEF5Q12774 1597 aa8.53□□□□□ -1.04
LINC00309-201ENST00000431020 ROCK1Q13464 1354 aa8.53□□□□□ -1.04
LINC00309-201ENST00000431020 CLTCQ00610 1675 aaKnown RBP8.53□□□□□ -1.04
LINC00309-201ENST00000431020 CCDC144AA2RUR9 1427 aa8.52□□□□□ -1.05
LINC00309-201ENST00000431020 FOXD4L1Q9NU39 408 aa8.52□□□□□ -1.05
LINC00309-201ENST00000431020 TRAK1Q9UPV9 953 aa8.52□□□□□ -1.05
LINC00309-201ENST00000431020 INO80Q9ULG1 1556 aaPredicted RBP8.52□□□□□ -1.05
LINC00309-201ENST00000431020 L3MBTL2Q969R5 705 aa8.52□□□□□ -1.05
LINC00309-201ENST00000431020 ERBINQ96RT1 1412 aa8.52□□□□□ -1.05
LINC00309-201ENST00000431020 CFAP70Q5T0N1 1121 aa8.51□□□□□ -1.05
LINC00309-201ENST00000431020 SLC52A1Q9NWF4 448 aa8.51□□□□□ -1.05
LINC00309-201ENST00000431020 ZMYM4Q5VZL5 1548 aa8.51□□□□□ -1.05
LINC00309-201ENST00000431020 TONSLQ96HA7 1378 aa8.51□□□□□ -1.05
LINC00309-201ENST00000431020 BCL11AQ9H165 835 aa8.5□□□□□ -1.05
LINC00309-201ENST00000431020 FER1L4A9Z1Z3 1794 aa8.5□□□□□ -1.05
LINC00309-201ENST00000431020 SHANK2Q9UPX8 1470 aa8.5□□□□□ -1.05
LINC00309-201ENST00000431020 ADGRF5Q8IZF2 1346 aa8.49□□□□□ -1.05
LINC00309-201ENST00000431020 LMOD2Q6P5Q4 547 aa8.49□□□□□ -1.05
LINC00309-201ENST00000431020 PROSER2Q86WR7 435 aaPredicted RBP8.49□□□□□ -1.05
LINC00309-201ENST00000431020 FAM135AQ9P2D6 1515 aa8.49□□□□□ -1.05
LINC00309-201ENST00000431020 CEP152O94986 1710 aa8.49□□□□□ -1.05
LINC00309-201ENST00000431020 ADGBQ8N7X0 1667 aa8.48□□□□□ -1.05
LINC00309-201ENST00000431020 WAPLQ7Z5K2 1190 aa8.48□□□□□ -1.05
LINC00309-201ENST00000431020 POGKQ9P215 609 aa8.48□□□□□ -1.05
LINC00309-201ENST00000431020 NBPF1Q3BBV0 1214 aa8.48□□□□□ -1.05
LINC00309-201ENST00000431020 TIMELESSQ9UNS1 1208 aa8.48□□□□□ -1.05
LINC00309-201ENST00000431020 BCORL1Q5H9F3 1711 aa8.48□□□□□ -1.05
LINC00309-201ENST00000431020 HDGFP51858 240 aaKnown RBP8.47□□□□□ -1.05
LINC00309-201ENST00000431020 CNTLNQ9NXG0 1405 aa8.47□□□□□ -1.05
LINC00309-201ENST00000431020 ABCC3O15438 1527 aa8.47□□□□□ -1.05
LINC00309-201ENST00000431020 ADGRL2O95490 1459 aa8.47□□□□□ -1.05
LINC00309-201ENST00000431020 DHX57Q6P158 1386 aaKnown RBP8.47□□□□□ -1.05
LINC00309-201ENST00000431020 CNKSR2Q8WXI2 1034 aa8.47□□□□□ -1.05
LINC00309-201ENST00000431020 PRDM15P57071 1507 aaPredicted RBP8.46□□□□□ -1.05
LINC00309-201ENST00000431020 VGFO15240 615 aaPredicted RBP8.46□□□□□ -1.05
LINC00309-201ENST00000431020 XPCQ01831 940 aaPredicted RBP8.46□□□□□ -1.05
LINC00309-201ENST00000431020 KDM5DQ9BY66 1539 aa8.46□□□□□ -1.06
LINC00309-201ENST00000431020 SRCAPQ6ZRS2 3230 aa8.46□□□□□ -1.06
LINC00309-201ENST00000431020 UBAP1LF5GYI3 381 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms