RNA–Protein interactions for RNA: ENST00000429774.6

ATXN3-204, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,713 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-204ENST00000429774 AMPHP49418 695 aa9.24□□□□□ -0.93
ATXN3-204ENST00000429774 EVA1CP58658 441 aa9.24□□□□□ -0.93
ATXN3-204ENST00000429774 EPRSP07814 1512 aaKnown RBP9.24□□□□□ -0.93
ATXN3-204ENST00000429774 CD109Q6YHK3 1445 aa9.23□□□□□ -0.93
ATXN3-204ENST00000429774 TIMELESSQ9UNS1 1208 aa9.23□□□□□ -0.93
ATXN3-204ENST00000429774 C9orf84Q5VXU9 1444 aa9.23□□□□□ -0.93
ATXN3-204ENST00000429774 ANKRD50Q9ULJ7 1429 aa9.23□□□□□ -0.93
ATXN3-204ENST00000429774 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.23□□□□□ -0.93
ATXN3-204ENST00000429774 TROQ12816 1431 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-204ENST00000429774 U2AF1L5P0DN76 240 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-204ENST00000429774 U2AF1Q01081 240 aaKnown RBP eCLIP9.22□□□□□ -0.93
ATXN3-204ENST00000429774 UPF2Q9HAU5 1272 aaKnown RBP9.22□□□□□ -0.93
ATXN3-204ENST00000429774 PSME1Q06323 249 aa9.22□□□□□ -0.93
ATXN3-204ENST00000429774 ATF3P18847 181 aa9.21□□□□□ -0.93
ATXN3-204ENST00000429774 ST20-MTHFSA0A0A6YYL1 179 aa9.21□□□□□ -0.94
ATXN3-204ENST00000429774 TMEM132EQ6IEE7 984 aa9.21□□□□□ -0.94
ATXN3-204ENST00000429774 CCDC146Q8IYE0 955 aa9.2□□□□□ -0.94
ATXN3-204ENST00000429774 DHX57Q6P158 1386 aaKnown RBP9.2□□□□□ -0.94
ATXN3-204ENST00000429774 EVC2Q86UK5 1308 aa9.2□□□□□ -0.94
ATXN3-204ENST00000429774 SUPT16HQ9Y5B9 1047 aaKnown RBP9.2□□□□□ -0.94
ATXN3-204ENST00000429774 TXNDC2Q86VQ3 553 aa9.2□□□□□ -0.94
ATXN3-204ENST00000429774 OS9Q13438 667 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-204ENST00000429774 PLEKHH2Q8IVE3 1493 aa9.19□□□□□ -0.94
ATXN3-204ENST00000429774 RAPGEF6Q8TEU7 1601 aa9.19□□□□□ -0.94
ATXN3-204ENST00000429774 NUTM2GQ5VZR2 741 aa9.19□□□□□ -0.94
ATXN3-204ENST00000429774 PTPN23Q9H3S7 1636 aa9.19□□□□□ -0.94
ATXN3-204ENST00000429774 PANK3Q9H999 370 aa9.18□□□□□ -0.94
ATXN3-204ENST00000429774 ADAMTS12P58397 1594 aa9.17□□□□□ -0.94
ATXN3-204ENST00000429774 WDR62O43379 1518 aa9.17□□□□□ -0.94
ATXN3-204ENST00000429774 DAPK1P53355 1430 aa9.17□□□□□ -0.94
ATXN3-204ENST00000429774 COG3Q96JB2 828 aa9.17□□□□□ -0.94
ATXN3-204ENST00000429774 CAMSAP2Q08AD1 1489 aa9.17□□□□□ -0.94
ATXN3-204ENST00000429774 ANP32BQ92688 251 aaKnown RBP9.17□□□□□ -0.94
ATXN3-204ENST00000429774 ADGRL1O94910 1474 aa9.16□□□□□ -0.94
ATXN3-204ENST00000429774 PIP4K2BP78356 416 aa9.16□□□□□ -0.94
ATXN3-204ENST00000429774 CABP2Q9NPB3 220 aa9.16□□□□□ -0.94
ATXN3-204ENST00000429774 POGZQ7Z3K3 1410 aa9.16□□□□□ -0.94
ATXN3-204ENST00000429774 USP47Q96K76 1375 aa9.15□□□□□ -0.94
ATXN3-204ENST00000429774 THOC2Q8NI27 1593 aaKnown RBP9.15□□□□□ -0.94
ATXN3-204ENST00000429774 GOLGA2Q08379 1002 aa9.15□□□□□ -0.95
ATXN3-204ENST00000429774 DEKP35659 375 aaKnown RBP9.15□□□□□ -0.95
ATXN3-204ENST00000429774 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-204ENST00000429774 TAOK2Q9UL54 1235 aa9.14□□□□□ -0.95
ATXN3-204ENST00000429774 RALBP1Q15311 655 aa9.14□□□□□ -0.95
ATXN3-204ENST00000429774 ESCO1Q5FWF5 840 aa9.14□□□□□ -0.95
ATXN3-204ENST00000429774 PROSER2Q86WR7 435 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-204ENST00000429774 PHF23Q9BUL5 403 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-204ENST00000429774 THEMISQ8N1K5 641 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-204ENST00000429774 RRP7AQ9Y3A4 280 aaKnown RBP9.13□□□□□ -0.95
ATXN3-204ENST00000429774 FANCAO15360 1455 aa9.12□□□□□ -0.95
ATXN3-204ENST00000429774 RRBP1Q9P2E9 1410 aaKnown RBP9.12□□□□□ -0.95
ATXN3-204ENST00000429774 CEBPAP49715 358 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-204ENST00000429774 PMFBP1Q8TBY8 1022 aa9.12□□□□□ -0.95
ATXN3-204ENST00000429774 SYTL4Q96C24 671 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-204ENST00000429774 MIA2Q96PC5 1412 aa9.12□□□□□ -0.95
ATXN3-204ENST00000429774 CGNL1Q0VF96 1302 aa9.11□□□□□ -0.95
ATXN3-204ENST00000429774 TSPOAP1O95153 1857 aa9.11□□□□□ -0.95
ATXN3-204ENST00000429774 ASXL2Q76L83 1435 aa9.11□□□□□ -0.95
ATXN3-204ENST00000429774 CCDC141Q6ZP82 1450 aa9.11□□□□□ -0.95
ATXN3-204ENST00000429774 NUTM2BA6NNL0 878 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-204ENST00000429774 NUTM2EB1AL46 878 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-204ENST00000429774 MSH5O43196 834 aa9.11□□□□□ -0.95
ATXN3-204ENST00000429774 NUTM2AQ8IVF1 878 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-204ENST00000429774 ERBINQ96RT1 1412 aa9.11□□□□□ -0.95
ATXN3-204ENST00000429774 CFAP70Q5T0N1 1121 aa9.11□□□□□ -0.95
ATXN3-204ENST00000429774 SLC26A8Q96RN1 970 aa9.11□□□□□ -0.95
ATXN3-204ENST00000429774 C1orf141Q5JVX7 400 aa9.11□□□□□ -0.95
ATXN3-204ENST00000429774 ANKLE2Q86XL3 938 aa9.11□□□□□ -0.95
ATXN3-204ENST00000429774 KIAA0556O60303 1618 aa9.11□□□□□ -0.95
ATXN3-204ENST00000429774 APBB1O00213 710 aa9.1□□□□□ -0.95
ATXN3-204ENST00000429774 NAP1L5Q96NT1 182 aaPredicted RBP9.1□□□□□ -0.95
ATXN3-204ENST00000429774 PRAM1Q96QH2 718 aa9.1□□□□□ -0.95
ATXN3-204ENST00000429774 CENPJQ9HC77 1338 aaPredicted RBP9.1□□□□□ -0.95
ATXN3-204ENST00000429774 CASC1Q6TDU7 716 aa9.1□□□□□ -0.95
ATXN3-204ENST00000429774 CHMP3Q9Y3E7 222 aa9.1□□□□□ -0.95
ATXN3-204ENST00000429774 ITSN2Q9NZM3 1697 aa9.09□□□□□ -0.95
ATXN3-204ENST00000429774 CHD1O14646 1710 aa9.09□□□□□ -0.95
ATXN3-204ENST00000429774 CALD1Q05682 793 aaKnown RBP9.08□□□□□ -0.96
ATXN3-204ENST00000429774 RGS3P49796 1198 aa9.08□□□□□ -0.96
ATXN3-204ENST00000429774 NGEFQ8N5V2 710 aa9.08□□□□□ -0.96
ATXN3-204ENST00000429774 DENND4BO75064 1496 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-204ENST00000429774 TPRNQ4KMQ1 711 aa9.07□□□□□ -0.96
ATXN3-204ENST00000429774 AKNAQ7Z591 1439 aa9.07□□□□□ -0.96
ATXN3-204ENST00000429774 ABTB2Q8N961 1025 aa9.07□□□□□ -0.96
ATXN3-204ENST00000429774 USP35Q9P2H5 1018 aa9.07□□□□□ -0.96
ATXN3-204ENST00000429774 FBXO31Q5XUX0 539 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-204ENST00000429774 SLC4A10Q6U841 1118 aa9.07□□□□□ -0.96
ATXN3-204ENST00000429774 RBM33Q96EV2 1170 aaKnown RBP9.06□□□□□ -0.96
ATXN3-204ENST00000429774 ITPRIPQ8IWB1 547 aa9.06□□□□□ -0.96
ATXN3-204ENST00000429774 MS4A1P11836 297 aa9.06□□□□□ -0.96
ATXN3-204ENST00000429774 XPCQ01831 940 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-204ENST00000429774 KIAA1107Q9UPP5 1409 aa9.06□□□□□ -0.96
ATXN3-204ENST00000429774 CCER2I3L3R5 266 aa9.06□□□□□ -0.96
ATXN3-204ENST00000429774 CDK19Q9BWU1 502 aa9.06□□□□□ -0.96
ATXN3-204ENST00000429774 ATP10BO94823 1461 aa9.06□□□□□ -0.96
ATXN3-204ENST00000429774 TMX4Q9H1E5 349 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-204ENST00000429774 CEP170Q5SW79 1584 aa9.06□□□□□ -0.96
ATXN3-204ENST00000429774 NECTIN2Q92692 538 aa9.05□□□□□ -0.96
ATXN3-204ENST00000429774 GGNBP2Q9H3C7 697 aa9.05□□□□□ -0.96
ATXN3-204ENST00000429774 STRN4Q9NRL3 753 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms