RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 PRG4Q92954 1404 aaPredicted RBP16.19■□□□□ 0.18
CPNE4-201ENST00000429747 KIAA1107Q9UPP5 1409 aa16.19■□□□□ 0.18
CPNE4-201ENST00000429747 RRP7AQ9Y3A4 280 aaKnown RBP16.19■□□□□ 0.18
CPNE4-201ENST00000429747 PRDM2Q13029 1718 aa16.19■□□□□ 0.18
CPNE4-201ENST00000429747 ADAMTS8Q9UP79 889 aa16.18■□□□□ 0.18
CPNE4-201ENST00000429747 KANK1Q14678 1352 aa16.18■□□□□ 0.18
CPNE4-201ENST00000429747 EPRSP07814 1512 aaKnown RBP16.18■□□□□ 0.18
CPNE4-201ENST00000429747 U2AF1L5P0DN76 240 aaPredicted RBP16.18■□□□□ 0.18
CPNE4-201ENST00000429747 U2AF1Q01081 240 aaKnown RBP eCLIP16.18■□□□□ 0.18
CPNE4-201ENST00000429747 KIF3BO15066 747 aa16.17■□□□□ 0.18
CPNE4-201ENST00000429747 CENPJQ9HC77 1338 aaPredicted RBP16.17■□□□□ 0.18
CPNE4-201ENST00000429747 BCL2L13Q9BXK5 485 aa16.16■□□□□ 0.18
CPNE4-201ENST00000429747 TRIM44Q96DX7 344 aaPredicted RBP16.16■□□□□ 0.18
CPNE4-201ENST00000429747 GZF1Q9H116 711 aaPredicted RBP16.15■□□□□ 0.18
CPNE4-201ENST00000429747 GSE1Q14687 1217 aa16.15■□□□□ 0.18
CPNE4-201ENST00000429747 COG6Q9Y2V7 657 aa16.15■□□□□ 0.18
CPNE4-201ENST00000429747 GGT6Q6P531 493 aa16.15■□□□□ 0.18
CPNE4-201ENST00000429747 SPAG9O60271 1321 aaKnown RBP16.13■□□□□ 0.17
CPNE4-201ENST00000429747 CC2D2AQ9P2K1 1620 aa16.13■□□□□ 0.17
CPNE4-201ENST00000429747 POGKQ9P215 609 aa16.13■□□□□ 0.17
CPNE4-201ENST00000429747 SRPK2P78362 688 aaKnown RBP16.12■□□□□ 0.17
CPNE4-201ENST00000429747 SKAP1Q86WV1 359 aa16.12■□□□□ 0.17
CPNE4-201ENST00000429747 BACH2Q9BYV9 841 aa16.12■□□□□ 0.17
CPNE4-201ENST00000429747 PTPRGP23470 1445 aa16.12■□□□□ 0.17
CPNE4-201ENST00000429747 NCLP19338 710 aaKnown RBP16.12■□□□□ 0.17
CPNE4-201ENST00000429747 RWDD1Q9H446 243 aaPredicted RBP16.12■□□□□ 0.17
CPNE4-201ENST00000429747 DNAJC5BQ9UF47 199 aa16.12■□□□□ 0.17
CPNE4-201ENST00000429747 GRIN2BQ13224 1484 aa16.12■□□□□ 0.17
CPNE4-201ENST00000429747 ABCC5O15440 1437 aa16.12■□□□□ 0.17
CPNE4-201ENST00000429747 ROCK1Q13464 1354 aa16.11■□□□□ 0.17
CPNE4-201ENST00000429747 NAP1L5Q96NT1 182 aaPredicted RBP16.11■□□□□ 0.17
CPNE4-201ENST00000429747 ESF1Q9H501 851 aaKnown RBP16.11■□□□□ 0.17
CPNE4-201ENST00000429747 STK26Q9P289 416 aa16.11■□□□□ 0.17
CPNE4-201ENST00000429747 HSP90AB1P08238 724 aaKnown RBP16.11■□□□□ 0.17
CPNE4-201ENST00000429747 HSCBQ8IWL3 235 aa16.11■□□□□ 0.17
CPNE4-201ENST00000429747 TRAK1Q9UPV9 953 aa16.11■□□□□ 0.17
CPNE4-201ENST00000429747 HECW1Q76N89 1606 aa16.1■□□□□ 0.17
CPNE4-201ENST00000429747 GOLGA6L22H0YM25 854 aa16.1■□□□□ 0.17
CPNE4-201ENST00000429747 RPRD2Q5VT52 1461 aaKnown RBP16.1■□□□□ 0.17
CPNE4-201ENST00000429747 E9PSI1 815 aa16.1■□□□□ 0.17
CPNE4-201ENST00000429747 EIF3AQ14152 1382 aaKnown RBP16.1■□□□□ 0.17
CPNE4-201ENST00000429747 MFAP1P55081 439 aaKnown RBP16.09■□□□□ 0.17
CPNE4-201ENST00000429747 ITPRIPQ8IWB1 547 aa16.09■□□□□ 0.17
CPNE4-201ENST00000429747 PMFBP1Q8TBY8 1022 aa16.09■□□□□ 0.17
CPNE4-201ENST00000429747 TROQ12816 1431 aaPredicted RBP16.09■□□□□ 0.17
CPNE4-201ENST00000429747 NFKBIBQ15653 356 aa16.09■□□□□ 0.17
CPNE4-201ENST00000429747 GLIPR1L2Q4G1C9 344 aa16.09■□□□□ 0.17
CPNE4-201ENST00000429747 NUTM2DQ5VT03 806 aaPredicted RBP16.08■□□□□ 0.16
CPNE4-201ENST00000429747 L1TD1Q5T7N2 865 aaKnown RBP16.08■□□□□ 0.16
CPNE4-201ENST00000429747 PLPPR3Q6T4P5 718 aa16.07■□□□□ 0.16
CPNE4-201ENST00000429747 IL27Q8NEV9 243 aa16.07■□□□□ 0.16
CPNE4-201ENST00000429747 SMC4Q9NTJ3 1288 aa16.07■□□□□ 0.16
CPNE4-201ENST00000429747 C9orf84Q5VXU9 1444 aa16.07■□□□□ 0.16
CPNE4-201ENST00000429747 PPP2R1AP30153 589 aa16.05■□□□□ 0.16
CPNE4-201ENST00000429747 CGNL1Q0VF96 1302 aa16.05■□□□□ 0.16
CPNE4-201ENST00000429747 CUL7Q14999 1698 aa16.05■□□□□ 0.16
CPNE4-201ENST00000429747 PANK1Q8TE04 598 aa16.04■□□□□ 0.16
CPNE4-201ENST00000429747 C20orf194Q5TEA3 1177 aa16.01■□□□□ 0.15
CPNE4-201ENST00000429747 WASHC2CQ9Y4E1 1318 aa16.01■□□□□ 0.15
CPNE4-201ENST00000429747 URB2Q14146 1524 aaKnown RBP16.01■□□□□ 0.15
CPNE4-201ENST00000429747 BCAR3O75815 825 aa16■□□□□ 0.15
CPNE4-201ENST00000429747 IQGAP2Q13576 1575 aa16■□□□□ 0.15
CPNE4-201ENST00000429747 IPO8O15397 1037 aaKnown RBP16■□□□□ 0.15
CPNE4-201ENST00000429747 BRPF3Q9ULD4 1205 aa16■□□□□ 0.15
CPNE4-201ENST00000429747 SNAPC4Q5SXM2 1469 aa15.99■□□□□ 0.15
CPNE4-201ENST00000429747 TPRNQ4KMQ1 711 aa15.99■□□□□ 0.15
CPNE4-201ENST00000429747 FRAT2O75474 233 aaPredicted RBP15.98■□□□□ 0.15
CPNE4-201ENST00000429747 UGGT2Q9NYU1 1516 aa15.98■□□□□ 0.15
CPNE4-201ENST00000429747 PNNQ9H307 717 aaKnown RBP15.98■□□□□ 0.15
CPNE4-201ENST00000429747 GOLGA6L3A6NEY3 463 aa15.97■□□□□ 0.15
CPNE4-201ENST00000429747 APBB1O00213 710 aa15.97■□□□□ 0.15
CPNE4-201ENST00000429747 CFAP43Q8NDM7 1665 aa15.97■□□□□ 0.15
CPNE4-201ENST00000429747 CFAP70Q5T0N1 1121 aa15.97■□□□□ 0.15
CPNE4-201ENST00000429747 FOXD4L1Q9NU39 408 aa15.97■□□□□ 0.15
CPNE4-201ENST00000429747 CAMSAP2Q08AD1 1489 aa15.97■□□□□ 0.15
CPNE4-201ENST00000429747 CHMP4BQ9H444 224 aaKnown RBP15.96■□□□□ 0.15
CPNE4-201ENST00000429747 THOC2Q8NI27 1593 aaKnown RBP15.96■□□□□ 0.15
CPNE4-201ENST00000429747 PLB1Q6P1J6 1458 aa15.96■□□□□ 0.14
CPNE4-201ENST00000429747 AFAP1Q8N556 730 aa15.95■□□□□ 0.14
CPNE4-201ENST00000429747 KIAA0586Q9BVV6 1533 aa15.95■□□□□ 0.14
CPNE4-201ENST00000429747 ZKSCAN2Q63HK3 967 aa15.95■□□□□ 0.14
CPNE4-201ENST00000429747 CASC1Q6TDU7 716 aa15.95■□□□□ 0.14
CPNE4-201ENST00000429747 ERBINQ96RT1 1412 aa15.94■□□□□ 0.14
CPNE4-201ENST00000429747 SOX12O15370 315 aa15.93■□□□□ 0.14
CPNE4-201ENST00000429747 HDGFL2Q7Z4V5 671 aaPredicted RBP15.93■□□□□ 0.14
CPNE4-201ENST00000429747 ANO8Q9HCE9 1232 aaPredicted RBP15.93■□□□□ 0.14
CPNE4-201ENST00000429747 ELL2O00472 640 aaPredicted RBP15.92■□□□□ 0.14
CPNE4-201ENST00000429747 PLEKHG5O94827 1062 aa15.91■□□□□ 0.14
CPNE4-201ENST00000429747 RUNDC1Q96C34 613 aa15.91■□□□□ 0.14
CPNE4-201ENST00000429747 GBP4Q96PP9 640 aa15.91■□□□□ 0.14
CPNE4-201ENST00000429747 TCP11L2Q8N4U5 519 aa15.91■□□□□ 0.14
CPNE4-201ENST00000429747 NGEFQ8N5V2 710 aa15.91■□□□□ 0.14
CPNE4-201ENST00000429747 MRC2Q9UBG0 1479 aa15.9■□□□□ 0.14
CPNE4-201ENST00000429747 ARHGEF11O15085 1522 aa15.9■□□□□ 0.14
CPNE4-201ENST00000429747 PTMAP06454 111 aaKnown RBP15.9■□□□□ 0.14
CPNE4-201ENST00000429747 DZIP1LQ8IYY4 767 aaKnown RBP15.89■□□□□ 0.13
CPNE4-201ENST00000429747 TMEM132EQ6IEE7 984 aa15.89■□□□□ 0.13
CPNE4-201ENST00000429747 DHX29Q7Z478 1369 aaKnown RBP15.89■□□□□ 0.13
CPNE4-201ENST00000429747 MTHFSP49914 203 aa15.88■□□□□ 0.13
CPNE4-201ENST00000429747 TERF2IPQ9NYB0 399 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms