RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 WASHC2AQ641Q2 1341 aa27.76■■■□□ 2.03
CASC4-203ENST00000429162 DEPDC5O75140 1603 aa27.75■■■□□ 2.03
CASC4-203ENST00000429162 ATP10AO60312 1499 aa27.73■■■□□ 2.03
CASC4-203ENST00000429162 PLA2R1Q13018 1463 aa27.72■■■□□ 2.03
CASC4-203ENST00000429162 EIF2AK4Q9P2K8 1649 aaKnown RBP27.71■■■□□ 2.03
CASC4-203ENST00000429162 CCER2I3L3R5 266 aa27.7■■■□□ 2.02
CASC4-203ENST00000429162 CCDC7Q96M83 1385 aa27.69■■■□□ 2.02
CASC4-203ENST00000429162 KDM5CP41229 1560 aa27.69■■■□□ 2.02
CASC4-203ENST00000429162 ZNF326Q5BKZ1 582 aaKnown RBP27.68■■■□□ 2.02
CASC4-203ENST00000429162 CNTLNQ9NXG0 1405 aa27.68■■■□□ 2.02
CASC4-203ENST00000429162 ZNF518AQ6AHZ1 1483 aa27.67■■■□□ 2.02
CASC4-203ENST00000429162 CD109Q6YHK3 1445 aa27.67■■■□□ 2.02
CASC4-203ENST00000429162 USP47Q96K76 1375 aa27.66■■■□□ 2.02
CASC4-203ENST00000429162 GTF3C3Q9Y5Q9 886 aa27.65■■■□□ 2.02
CASC4-203ENST00000429162 E9PCH4 1651 aa27.63■■■□□ 2.01
CASC4-203ENST00000429162 TET3O43151 1660 aa27.63■■■□□ 2.01
CASC4-203ENST00000429162 KIDINS220Q9ULH0 1771 aa27.62■■■□□ 2.01
CASC4-203ENST00000429162 VWDEQ8N2E2 1590 aa27.62■■■□□ 2.01
CASC4-203ENST00000429162 DCAF11Q8TEB1 546 aa27.61■■■□□ 2.01
CASC4-203ENST00000429162 PRDM15P57071 1507 aaPredicted RBP27.6■■■□□ 2.01
CASC4-203ENST00000429162 DHX29Q7Z478 1369 aaKnown RBP27.6■■■□□ 2.01
CASC4-203ENST00000429162 KANK1Q14678 1352 aa27.59■■■□□ 2.01
CASC4-203ENST00000429162 POGZQ7Z3K3 1410 aa27.59■■■□□ 2.01
CASC4-203ENST00000429162 TRPM2O94759 1503 aa27.58■■■□□ 2.01
CASC4-203ENST00000429162 C11orf95C9JLR9 678 aaPredicted RBP27.58■■■□□ 2.01
CASC4-203ENST00000429162 MYT1LQ9UL68 1186 aa27.58■■■□□ 2.01
CASC4-203ENST00000429162 TRPM1Q7Z4N2 1603 aa27.58■■■□□ 2.01
CASC4-203ENST00000429162 A2MP01023 1474 aa27.58■■■□□ 2.01
CASC4-203ENST00000429162 PRAG1Q86YV5 1406 aa27.57■■■□□ 2
CASC4-203ENST00000429162 SPHKAPQ2M3C7 1700 aa27.57■■■□□ 2
CASC4-203ENST00000429162 KIF7Q2M1P5 1343 aa27.57■■■□□ 2
CASC4-203ENST00000429162 KDM2AQ9Y2K7 1162 aa27.56■■■□□ 2
CASC4-203ENST00000429162 MROH1Q8NDA8 1641 aa27.55■■■□□ 2
CASC4-203ENST00000429162 NEO1Q92859 1461 aa27.55■■■□□ 2
CASC4-203ENST00000429162 BCORL1Q5H9F3 1711 aa27.55■■■□□ 2
CASC4-203ENST00000429162 CARD11Q9BXL7 1154 aa27.54■■■□□ 2
CASC4-203ENST00000429162 HECW2Q9P2P5 1572 aa27.54■■■□□ 2
CASC4-203ENST00000429162 MLH3Q9UHC1 1453 aa27.52■■■□□ 2
CASC4-203ENST00000429162 LAMC1P11047 1609 aa27.52■■■□□ 2
CASC4-203ENST00000429162 PTPRTO14522 1441 aa27.52■■■□□ 2
CASC4-203ENST00000429162 ARID4BQ4LE39 1312 aaPredicted RBP27.51■■■□□ 2
CASC4-203ENST00000429162 CEP152O94986 1710 aa27.51■■□□□ 1.99
CASC4-203ENST00000429162 ROCK2O75116 1388 aaKnown RBP27.5■■□□□ 1.99
CASC4-203ENST00000429162 RNF17Q9BXT8 1623 aaKnown RBP27.5■■□□□ 1.99
CASC4-203ENST00000429162 KIF3BO15066 747 aa27.49■■□□□ 1.99
CASC4-203ENST00000429162 RIMBP3CA6NJZ7 1639 aa27.49■■□□□ 1.99
CASC4-203ENST00000429162 RIMBP3BA6NNM3 1639 aa27.49■■□□□ 1.99
CASC4-203ENST00000429162 RIMBP3Q9UFD9 1639 aa27.49■■□□□ 1.99
CASC4-203ENST00000429162 MAP3K4Q9Y6R4 1608 aa27.48■■□□□ 1.99
CASC4-203ENST00000429162 RGL3Q3MIN7 710 aa27.47■■□□□ 1.99
CASC4-203ENST00000429162 CLTCL1P53675 1640 aa27.45■■□□□ 1.99
CASC4-203ENST00000429162 GLI2P10070 1586 aa27.45■■□□□ 1.99
CASC4-203ENST00000429162 EFCAB6Q5THR3 1501 aa27.45■■□□□ 1.98
CASC4-203ENST00000429162 GPRASP1Q5JY77 1395 aa27.45■■□□□ 1.98
CASC4-203ENST00000429162 LMTK2Q8IWU2 1503 aa27.44■■□□□ 1.98
CASC4-203ENST00000429162 FRMPD1Q5SYB0 1578 aa27.42■■□□□ 1.98
CASC4-203ENST00000429162 ABCA6Q8N139 1617 aa27.42■■□□□ 1.98
CASC4-203ENST00000429162 NEURL4Q96JN8 1562 aa27.41■■□□□ 1.98
CASC4-203ENST00000429162 PPRC1Q5VV67 1664 aaKnown RBP27.38■■□□□ 1.97
CASC4-203ENST00000429162 MADDQ8WXG6 1647 aa27.38■■□□□ 1.97
CASC4-203ENST00000429162 CYB5RLQ6IPT4 315 aa27.37■■□□□ 1.97
CASC4-203ENST00000429162 RICTORQ6R327 1708 aa27.36■■□□□ 1.97
CASC4-203ENST00000429162 ST20-MTHFSA0A0A6YYL1 179 aa27.35■■□□□ 1.97
CASC4-203ENST00000429162 PRKRIP1Q9H875 184 aaPredicted RBP27.35■■□□□ 1.97
CASC4-203ENST00000429162 STAC3Q96MF2 364 aa27.34■■□□□ 1.97
CASC4-203ENST00000429162 DIP2CQ9Y2E4 1556 aa27.32■■□□□ 1.96
CASC4-203ENST00000429162 DIP2BQ9P265 1576 aa27.3■■□□□ 1.96
CASC4-203ENST00000429162 POLR3GLQ9BT43 218 aa27.29■■□□□ 1.96
CASC4-203ENST00000429162 NBPF1Q3BBV0 1214 aa27.29■■□□□ 1.96
CASC4-203ENST00000429162 KIF1BO60333 1816 aa27.28■■□□□ 1.96
CASC4-203ENST00000429162 RAPGEF3O95398 923 aa27.25■■□□□ 1.95
CASC4-203ENST00000429162 ABCC3O15438 1527 aa27.24■■□□□ 1.95
CASC4-203ENST00000429162 UGGT1Q9NYU2 1555 aa27.24■■□□□ 1.95
CASC4-203ENST00000429162 COL17A1Q9UMD9 1497 aaPredicted RBP27.24■■□□□ 1.95
CASC4-203ENST00000429162 IQGAP1P46940 1657 aa27.24■■□□□ 1.95
CASC4-203ENST00000429162 KIAA1210Q9ULL0 1709 aa27.23■■□□□ 1.95
CASC4-203ENST00000429162 MYOM2P54296 1465 aa27.22■■□□□ 1.95
CASC4-203ENST00000429162 CAMSAP1Q5T5Y3 1602 aa27.21■■□□□ 1.95
CASC4-203ENST00000429162 IFT172Q9UG01 1749 aa27.21■■□□□ 1.95
CASC4-203ENST00000429162 ZMYM4Q5VZL5 1548 aa27.21■■□□□ 1.95
CASC4-203ENST00000429162 DNAJC5Q9H3Z4 198 aa27.2■■□□□ 1.94
CASC4-203ENST00000429162 NPATQ14207 1427 aa27.2■■□□□ 1.94
CASC4-203ENST00000429162 ZC3H13Q5T200 1668 aaKnown RBP27.19■■□□□ 1.94
CASC4-203ENST00000429162 MROH2AA6NES4 1674 aa27.19■■□□□ 1.94
CASC4-203ENST00000429162 ADGRB3O60242 1522 aa27.18■■□□□ 1.94
CASC4-203ENST00000429162 GGT6Q6P531 493 aa27.18■■□□□ 1.94
CASC4-203ENST00000429162 FAM69CQ0P6D2 419 aa27.15■■□□□ 1.94
CASC4-203ENST00000429162 MRS2Q9HD23 443 aa27.15■■□□□ 1.94
CASC4-203ENST00000429162 SCAF11Q99590 1463 aaKnown RBP27.14■■□□□ 1.93
CASC4-203ENST00000429162 TESK2Q96S53 571 aa27.14■■□□□ 1.93
CASC4-203ENST00000429162 WASHC2CQ9Y4E1 1318 aa27.13■■□□□ 1.93
CASC4-203ENST00000429162 YEATS2Q9ULM3 1422 aa27.13■■□□□ 1.93
CASC4-203ENST00000429162 CCDC184Q52MB2 194 aa27.12■■□□□ 1.93
CASC4-203ENST00000429162 KTN1Q86UP2 1357 aaKnown RBP27.12■■□□□ 1.93
CASC4-203ENST00000429162 DISP3Q9P2K9 1392 aa27.1■■□□□ 1.93
CASC4-203ENST00000429162 HNRNPUQ00839 825 aaKnown RBP eCLIP27.1■■□□□ 1.93
CASC4-203ENST00000429162 TMF1P82094 1093 aa27.1■■□□□ 1.93
CASC4-203ENST00000429162 NRXN1Q9ULB1 1477 aa27.09■■□□□ 1.93
CASC4-203ENST00000429162 ARHGAP31Q2M1Z3 1444 aa27.08■■□□□ 1.93
CASC4-203ENST00000429162 TSPOAP1O95153 1857 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms