RNA–Protein interactions for RNA: ENST00000428816.1

BRWD1P3-201, Transcript of bromodomain and WD repeat domain containing 1 pseudogene 3, humanhuman

BASIC

Gene BRWD1P3, Length 390 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1P3-201ENST00000428816 LRRC7Q96NW7 1537 aa9.97□□□□□ -0.81
BRWD1P3-201ENST00000428816 REREQ9P2R6 1566 aa9.97□□□□□ -0.81
BRWD1P3-201ENST00000428816 SP7Q8TDD2 431 aaPredicted RBP9.97□□□□□ -0.81
BRWD1P3-201ENST00000428816 TRIM52Q96A61 297 aa9.97□□□□□ -0.81
BRWD1P3-201ENST00000428816 CEP170BQ9Y4F5 1589 aaPredicted RBP9.97□□□□□ -0.81
BRWD1P3-201ENST00000428816 PROM2Q8N271 834 aa9.96□□□□□ -0.82
BRWD1P3-201ENST00000428816 VWDEQ8N2E2 1590 aa9.96□□□□□ -0.82
BRWD1P3-201ENST00000428816 FAM9AQ8IZU1 332 aaPredicted RBP9.95□□□□□ -0.82
BRWD1P3-201ENST00000428816 CDK12Q9NYV4 1490 aaPredicted RBP9.95□□□□□ -0.82
BRWD1P3-201ENST00000428816 MYO3AQ8NEV4 1616 aa9.94□□□□□ -0.82
BRWD1P3-201ENST00000428816 SETBP1Q9Y6X0 1596 aa9.94□□□□□ -0.82
BRWD1P3-201ENST00000428816 ZNF772Q68DY9 489 aaPredicted RBP9.94□□□□□ -0.82
BRWD1P3-201ENST00000428816 SUPT6HQ7KZ85 1726 aaKnown RBP9.93□□□□□ -0.82
BRWD1P3-201ENST00000428816 FAM135BQ49AJ0 1406 aa9.93□□□□□ -0.82
BRWD1P3-201ENST00000428816 NEURL4Q96JN8 1562 aa9.92□□□□□ -0.82
BRWD1P3-201ENST00000428816 STAG3Q9UJ98 1225 aa9.92□□□□□ -0.82
BRWD1P3-201ENST00000428816 MROH2AA6NES4 1674 aa9.92□□□□□ -0.82
BRWD1P3-201ENST00000428816 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.92□□□□□ -0.82
BRWD1P3-201ENST00000428816 ZMYM3Q14202 1370 aa9.91□□□□□ -0.82
BRWD1P3-201ENST00000428816 C19orf67A6NJJ6 358 aa9.91□□□□□ -0.82
BRWD1P3-201ENST00000428816 SYNMO15061 1565 aa9.9□□□□□ -0.82
BRWD1P3-201ENST00000428816 DIP2CQ9Y2E4 1556 aa9.9□□□□□ -0.82
BRWD1P3-201ENST00000428816 RXRBP28702 533 aa9.9□□□□□ -0.82
BRWD1P3-201ENST00000428816 ZNF518AQ6AHZ1 1483 aa9.9□□□□□ -0.83
BRWD1P3-201ENST00000428816 CREBZFQ9NS37 354 aa9.89□□□□□ -0.83
BRWD1P3-201ENST00000428816 POLR1AO95602 1720 aaPredicted RBP9.88□□□□□ -0.83
BRWD1P3-201ENST00000428816 A2ML1A8K2U0 1454 aa9.88□□□□□ -0.83
BRWD1P3-201ENST00000428816 KDM5CP41229 1560 aa9.88□□□□□ -0.83
BRWD1P3-201ENST00000428816 FARP1Q9Y4F1 1045 aaPredicted RBP9.87□□□□□ -0.83
BRWD1P3-201ENST00000428816 DNMT1P26358 1616 aaKnown RBP9.86□□□□□ -0.83
BRWD1P3-201ENST00000428816 PLEKHD1A6NEE1 506 aa9.86□□□□□ -0.83
BRWD1P3-201ENST00000428816 PLCH2O75038 1416 aa9.86□□□□□ -0.83
BRWD1P3-201ENST00000428816 CDK13Q14004 1512 aaKnown RBP9.86□□□□□ -0.83
BRWD1P3-201ENST00000428816 JCADQ9P266 1359 aa9.85□□□□□ -0.83
BRWD1P3-201ENST00000428816 LRP5O75197 1615 aa9.85□□□□□ -0.83
BRWD1P3-201ENST00000428816 MED14O60244 1454 aa9.85□□□□□ -0.83
BRWD1P3-201ENST00000428816 NPHP4O75161 1426 aaPredicted RBP9.83□□□□□ -0.84
BRWD1P3-201ENST00000428816 RAPGEF6Q8TEU7 1601 aa9.83□□□□□ -0.84
BRWD1P3-201ENST00000428816 ANKLE2Q86XL3 938 aa9.83□□□□□ -0.84
BRWD1P3-201ENST00000428816 MLH3Q9UHC1 1453 aa9.83□□□□□ -0.84
BRWD1P3-201ENST00000428816 ABCA6Q8N139 1617 aa9.82□□□□□ -0.84
BRWD1P3-201ENST00000428816 YY1P25490 414 aa9.82□□□□□ -0.84
BRWD1P3-201ENST00000428816 AFAP1Q8N556 730 aa9.82□□□□□ -0.84
BRWD1P3-201ENST00000428816 MYT1LQ9UL68 1186 aa9.82□□□□□ -0.84
BRWD1P3-201ENST00000428816 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.82□□□□□ -0.84
BRWD1P3-201ENST00000428816 STRCP1A6NGW2 1772 aa9.81□□□□□ -0.84
BRWD1P3-201ENST00000428816 CTTNBP2Q8WZ74 1663 aa9.81□□□□□ -0.84
BRWD1P3-201ENST00000428816 NUP153P49790 1475 aaKnown RBP9.81□□□□□ -0.84
BRWD1P3-201ENST00000428816 EFCAB2Q5VUJ9 269 aa9.81□□□□□ -0.84
BRWD1P3-201ENST00000428816 MEX3CQ5U5Q3 659 aaKnown RBP9.8□□□□□ -0.84
BRWD1P3-201ENST00000428816 DEPDC5O75140 1603 aa9.8□□□□□ -0.84
BRWD1P3-201ENST00000428816 LRP6O75581 1613 aa9.8□□□□□ -0.84
BRWD1P3-201ENST00000428816 RGS12O14924 1447 aa9.8□□□□□ -0.84
BRWD1P3-201ENST00000428816 SPATA31A6Q5VVP1 1343 aa9.8□□□□□ -0.84
BRWD1P3-201ENST00000428816 ATAD2Q6PL18 1390 aa9.79□□□□□ -0.84
BRWD1P3-201ENST00000428816 ROBO1Q9Y6N7 1651 aa9.78□□□□□ -0.84
BRWD1P3-201ENST00000428816 MNX1P50219 401 aaPredicted RBP9.78□□□□□ -0.84
BRWD1P3-201ENST00000428816 NUTM2BA6NNL0 878 aaPredicted RBP9.77□□□□□ -0.85
BRWD1P3-201ENST00000428816 NUTM2EB1AL46 878 aaPredicted RBP9.77□□□□□ -0.85
BRWD1P3-201ENST00000428816 FKBP8Q14318 412 aa9.77□□□□□ -0.85
BRWD1P3-201ENST00000428816 NUTM2DQ5VT03 806 aaPredicted RBP9.77□□□□□ -0.85
BRWD1P3-201ENST00000428816 NUTM2AQ8IVF1 878 aaPredicted RBP9.77□□□□□ -0.85
BRWD1P3-201ENST00000428816 LRRC9Q6ZRR7 1453 aa9.76□□□□□ -0.85
BRWD1P3-201ENST00000428816 IQGAP1P46940 1657 aa9.76□□□□□ -0.85
BRWD1P3-201ENST00000428816 KDM5DQ9BY66 1539 aa9.76□□□□□ -0.85
BRWD1P3-201ENST00000428816 FGD6Q6ZV73 1430 aa9.75□□□□□ -0.85
BRWD1P3-201ENST00000428816 CLTCQ00610 1675 aaKnown RBP9.75□□□□□ -0.85
BRWD1P3-201ENST00000428816 SENP3-EIF4A1A0A087X0R7 540 aa9.75□□□□□ -0.85
BRWD1P3-201ENST00000428816 CD44P16070 742 aaKnown RBP9.75□□□□□ -0.85
BRWD1P3-201ENST00000428816 CCDC125Q86Z20 511 aa9.75□□□□□ -0.85
BRWD1P3-201ENST00000428816 ABCC1P33527 1531 aa9.75□□□□□ -0.85
BRWD1P3-201ENST00000428816 P3H3Q8IVL6 736 aa9.74□□□□□ -0.85
BRWD1P3-201ENST00000428816 THEMISQ8N1K5 641 aaPredicted RBP9.74□□□□□ -0.85
BRWD1P3-201ENST00000428816 RBM6P78332 1123 aaKnown RBP9.73□□□□□ -0.85
BRWD1P3-201ENST00000428816 GABBR2O75899 941 aa9.72□□□□□ -0.85
BRWD1P3-201ENST00000428816 PHLPP1O60346 1717 aa9.72□□□□□ -0.85
BRWD1P3-201ENST00000428816 XIRP1Q702N8 1843 aaKnown RBP9.72□□□□□ -0.85
BRWD1P3-201ENST00000428816 NHSL1Q5SYE7 1610 aa9.71□□□□□ -0.85
BRWD1P3-201ENST00000428816 TNRQ92752 1358 aa9.7□□□□□ -0.86
BRWD1P3-201ENST00000428816 FAM135AQ9P2D6 1515 aa9.7□□□□□ -0.86
BRWD1P3-201ENST00000428816 MYO5CQ9NQX4 1742 aa9.7□□□□□ -0.86
BRWD1P3-201ENST00000428816 AFF2P51816 1311 aa9.69□□□□□ -0.86
BRWD1P3-201ENST00000428816 COL16A1Q07092 1604 aaPredicted RBP9.69□□□□□ -0.86
BRWD1P3-201ENST00000428816 KIDINS220Q9ULH0 1771 aa9.68□□□□□ -0.86
BRWD1P3-201ENST00000428816 ITSN2Q9NZM3 1697 aa9.68□□□□□ -0.86
BRWD1P3-201ENST00000428816 NWD1Q149M9 1564 aa9.67□□□□□ -0.86
BRWD1P3-201ENST00000428816 SAMD9Q5K651 1589 aa9.67□□□□□ -0.86
BRWD1P3-201ENST00000428816 UGGT1Q9NYU2 1555 aa9.67□□□□□ -0.86
BRWD1P3-201ENST00000428816 ATP7AQ04656 1500 aa9.67□□□□□ -0.86
BRWD1P3-201ENST00000428816 NGLY1Q96IV0 654 aa9.67□□□□□ -0.86
BRWD1P3-201ENST00000428816 QTRT2Q9H974 415 aaKnown RBP9.67□□□□□ -0.86
BRWD1P3-201ENST00000428816 ARHGAP5Q13017 1502 aa9.66□□□□□ -0.86
BRWD1P3-201ENST00000428816 NLRP1Q9C000 1473 aa9.66□□□□□ -0.86
BRWD1P3-201ENST00000428816 TMEM94Q12767 1356 aa9.66□□□□□ -0.86
BRWD1P3-201ENST00000428816 EP400Q96L91 3159 aa9.66□□□□□ -0.86
BRWD1P3-201ENST00000428816 ZC3H13Q5T200 1668 aaKnown RBP9.66□□□□□ -0.86
BRWD1P3-201ENST00000428816 SHPRHQ149N8 1683 aa9.65□□□□□ -0.86
BRWD1P3-201ENST00000428816 MAP3K1Q13233 1512 aa9.64□□□□□ -0.87
BRWD1P3-201ENST00000428816 KIF14Q15058 1648 aa9.64□□□□□ -0.87
BRWD1P3-201ENST00000428816 HRCP23327 699 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms