RNA–Protein interactions for RNA: ENST00000428797.7

GABRA1-203, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-203ENST00000428797 UGGT2Q9NYU1 1516 aa12.17□□□□□ -0.46
GABRA1-203ENST00000428797 NEUROD2Q15784 382 aa12.17□□□□□ -0.46
GABRA1-203ENST00000428797 CTTNBP2Q8WZ74 1663 aa12.16□□□□□ -0.46
GABRA1-203ENST00000428797 PTPRKQ15262 1439 aa12.16□□□□□ -0.46
GABRA1-203ENST00000428797 CCDC184Q52MB2 194 aa12.16□□□□□ -0.46
GABRA1-203ENST00000428797 CDK13Q14004 1512 aaKnown RBP12.16□□□□□ -0.46
GABRA1-203ENST00000428797 ABCC5O15440 1437 aa12.16□□□□□ -0.46
GABRA1-203ENST00000428797 SPAG9O60271 1321 aaKnown RBP12.15□□□□□ -0.46
GABRA1-203ENST00000428797 PMFBP1Q8TBY8 1022 aa12.15□□□□□ -0.46
GABRA1-203ENST00000428797 C9orf84Q5VXU9 1444 aa12.14□□□□□ -0.47
GABRA1-203ENST00000428797 TCOF1Q13428 1488 aaKnown RBP12.14□□□□□ -0.47
GABRA1-203ENST00000428797 URB2Q14146 1524 aaKnown RBP12.14□□□□□ -0.47
GABRA1-203ENST00000428797 SNAPC4Q5SXM2 1469 aa12.14□□□□□ -0.47
GABRA1-203ENST00000428797 FAM161AQ3B820 660 aa12.14□□□□□ -0.47
GABRA1-203ENST00000428797 PRG4Q92954 1404 aaPredicted RBP12.13□□□□□ -0.47
GABRA1-203ENST00000428797 ESF1Q9H501 851 aaKnown RBP12.13□□□□□ -0.47
GABRA1-203ENST00000428797 RWDD1Q9H446 243 aaPredicted RBP12.13□□□□□ -0.47
GABRA1-203ENST00000428797 C11orf95C9JLR9 678 aaPredicted RBP12.13□□□□□ -0.47
GABRA1-203ENST00000428797 GOLGA6L22H0YM25 854 aa12.13□□□□□ -0.47
GABRA1-203ENST00000428797 CRBNQ96SW2 442 aa12.13□□□□□ -0.47
GABRA1-203ENST00000428797 E9PSI1 815 aa12.12□□□□□ -0.47
GABRA1-203ENST00000428797 L1TD1Q5T7N2 865 aaKnown RBP12.12□□□□□ -0.47
GABRA1-203ENST00000428797 GLIPR1L2Q4G1C9 344 aa12.12□□□□□ -0.47
GABRA1-203ENST00000428797 SYNJ2O15056 1496 aa12.11□□□□□ -0.47
GABRA1-203ENST00000428797 CGNL1Q0VF96 1302 aa12.11□□□□□ -0.47
GABRA1-203ENST00000428797 CENPJQ9HC77 1338 aaPredicted RBP12.11□□□□□ -0.47
GABRA1-203ENST00000428797 TNNT2P45379 298 aaPredicted RBP12.1□□□□□ -0.47
GABRA1-203ENST00000428797 CAMSAP2Q08AD1 1489 aa12.09□□□□□ -0.47
GABRA1-203ENST00000428797 IPO8O15397 1037 aaKnown RBP12.08□□□□□ -0.47
GABRA1-203ENST00000428797 PLIN1O60240 522 aa12.08□□□□□ -0.47
GABRA1-203ENST00000428797 KIF3BO15066 747 aa12.08□□□□□ -0.48
GABRA1-203ENST00000428797 CFAP44Q96MT7 982 aa12.08□□□□□ -0.48
GABRA1-203ENST00000428797 PLEKHH2Q8IVE3 1493 aa12.08□□□□□ -0.48
GABRA1-203ENST00000428797 AAMPQ13685 434 aa12.08□□□□□ -0.48
GABRA1-203ENST00000428797 POGKQ9P215 609 aa12.07□□□□□ -0.48
GABRA1-203ENST00000428797 U2SURPO15042 1029 aaKnown RBP12.07□□□□□ -0.48
GABRA1-203ENST00000428797 TRIM44Q96DX7 344 aaPredicted RBP12.07□□□□□ -0.48
GABRA1-203ENST00000428797 HSCBQ8IWL3 235 aa12.06□□□□□ -0.48
GABRA1-203ENST00000428797 CCDC146Q8IYE0 955 aa12.06□□□□□ -0.48
GABRA1-203ENST00000428797 MSH5O43196 834 aa12.05□□□□□ -0.48
GABRA1-203ENST00000428797 CASC1Q6TDU7 716 aa12.05□□□□□ -0.48
GABRA1-203ENST00000428797 KIF21AQ7Z4S6 1674 aa12.04□□□□□ -0.48
GABRA1-203ENST00000428797 U2AF1L5P0DN76 240 aaPredicted RBP12.04□□□□□ -0.48
GABRA1-203ENST00000428797 U2AF1Q01081 240 aaKnown RBP eCLIP12.04□□□□□ -0.48
GABRA1-203ENST00000428797 ARXQ96QS3 562 aa12.04□□□□□ -0.48
GABRA1-203ENST00000428797 HAP1P54257 671 aaPredicted RBP12.04□□□□□ -0.48
GABRA1-203ENST00000428797 PTMSP20962 102 aa12.03□□□□□ -0.48
GABRA1-203ENST00000428797 CALD1Q05682 793 aaKnown RBP12.03□□□□□ -0.48
GABRA1-203ENST00000428797 GSE1Q14687 1217 aa12.03□□□□□ -0.48
GABRA1-203ENST00000428797 BACH2Q9BYV9 841 aa12.03□□□□□ -0.48
GABRA1-203ENST00000428797 RTN4Q9NQC3 1192 aaKnown RBP12.03□□□□□ -0.48
GABRA1-203ENST00000428797 APAF1O14727 1248 aa12.03□□□□□ -0.48
GABRA1-203ENST00000428797 SRPK2P78362 688 aaKnown RBP12.02□□□□□ -0.48
GABRA1-203ENST00000428797 ADAMTS8Q9UP79 889 aa12.02□□□□□ -0.48
GABRA1-203ENST00000428797 GRIN2AQ12879 1464 aa12.02□□□□□ -0.48
GABRA1-203ENST00000428797 HSP90AB1P08238 724 aaKnown RBP12.02□□□□□ -0.49
GABRA1-203ENST00000428797 ARHGAP5Q13017 1502 aa12.02□□□□□ -0.49
GABRA1-203ENST00000428797 MAGI1Q96QZ7 1491 aaPredicted RBP12.02□□□□□ -0.49
GABRA1-203ENST00000428797 ERBINQ96RT1 1412 aa12.02□□□□□ -0.49
GABRA1-203ENST00000428797 HDGFL2Q7Z4V5 671 aaPredicted RBP12.01□□□□□ -0.49
GABRA1-203ENST00000428797 CDCA7LQ96GN5 454 aa12.01□□□□□ -0.49
GABRA1-203ENST00000428797 NBPF1Q3BBV0 1214 aa12.01□□□□□ -0.49
GABRA1-203ENST00000428797 SAMD9Q5K651 1589 aa12.01□□□□□ -0.49
GABRA1-203ENST00000428797 PPP2R1AP30153 589 aa12.01□□□□□ -0.49
GABRA1-203ENST00000428797 CCDC141Q6ZP82 1450 aa12.01□□□□□ -0.49
GABRA1-203ENST00000428797 SCAPERQ9BY12 1400 aa12□□□□□ -0.49
GABRA1-203ENST00000428797 GGT6Q6P531 493 aa12□□□□□ -0.49
GABRA1-203ENST00000428797 TERF2IPQ9NYB0 399 aa12□□□□□ -0.49
GABRA1-203ENST00000428797 RALGAPBQ86X10 1494 aa11.99□□□□□ -0.49
GABRA1-203ENST00000428797 KIF14Q15058 1648 aa11.99□□□□□ -0.49
GABRA1-203ENST00000428797 PAK3O75914 559 aaPredicted RBP11.99□□□□□ -0.49
GABRA1-203ENST00000428797 GPATCH8Q9UKJ3 1502 aaKnown RBP11.99□□□□□ -0.49
GABRA1-203ENST00000428797 SMC4Q9NTJ3 1288 aa11.98□□□□□ -0.49
GABRA1-203ENST00000428797 ITSN2Q9NZM3 1697 aa11.98□□□□□ -0.49
GABRA1-203ENST00000428797 WDR62O43379 1518 aa11.98□□□□□ -0.49
GABRA1-203ENST00000428797 RAPGEF6Q8TEU7 1601 aa11.98□□□□□ -0.49
GABRA1-203ENST00000428797 PLB1Q6P1J6 1458 aa11.97□□□□□ -0.49
GABRA1-203ENST00000428797 NINLQ9Y2I6 1382 aa11.97□□□□□ -0.49
GABRA1-203ENST00000428797 ITPRIPQ8IWB1 547 aa11.97□□□□□ -0.49
GABRA1-203ENST00000428797 RUNDC1Q96C34 613 aa11.97□□□□□ -0.49
GABRA1-203ENST00000428797 SLKQ9H2G2 1235 aaPredicted RBP11.97□□□□□ -0.49
GABRA1-203ENST00000428797 PDE3AQ14432 1141 aa11.97□□□□□ -0.49
GABRA1-203ENST00000428797 ZKSCAN2Q63HK3 967 aa11.97□□□□□ -0.49
GABRA1-203ENST00000428797 GBP4Q96PP9 640 aa11.97□□□□□ -0.49
GABRA1-203ENST00000428797 NCLP19338 710 aaKnown RBP11.97□□□□□ -0.49
GABRA1-203ENST00000428797 EVC2Q86UK5 1308 aa11.96□□□□□ -0.49
GABRA1-203ENST00000428797 NUP153P49790 1475 aaKnown RBP11.95□□□□□ -0.5
GABRA1-203ENST00000428797 VGFO15240 615 aaPredicted RBP11.95□□□□□ -0.5
GABRA1-203ENST00000428797 TRAK1Q9UPV9 953 aa11.95□□□□□ -0.5
GABRA1-203ENST00000428797 COG6Q9Y2V7 657 aa11.95□□□□□ -0.5
GABRA1-203ENST00000428797 GCC2Q8IWJ2 1684 aa11.95□□□□□ -0.5
GABRA1-203ENST00000428797 CLUAP1Q96AJ1 413 aa11.95□□□□□ -0.5
GABRA1-203ENST00000428797 ARHGEF11O15085 1522 aa11.95□□□□□ -0.5
GABRA1-203ENST00000428797 DNMT1P26358 1616 aaKnown RBP11.94□□□□□ -0.5
GABRA1-203ENST00000428797 ABCA5Q8WWZ7 1642 aa11.94□□□□□ -0.5
GABRA1-203ENST00000428797 ARHGEF12Q9NZN5 1544 aa11.94□□□□□ -0.5
GABRA1-203ENST00000428797 HDGFP51858 240 aaKnown RBP11.94□□□□□ -0.5
GABRA1-203ENST00000428797 NFKBIBQ15653 356 aa11.94□□□□□ -0.5
GABRA1-203ENST00000428797 ADAMTS12P58397 1594 aa11.93□□□□□ -0.5
GABRA1-203ENST00000428797 GOLGA6L3A6NEY3 463 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms