RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 SPATA31D1Q6ZQQ2 1576 aa4.79□□□□□ -1.64
RGPD1-203ENST00000428128 SIGLEC1Q9BZZ2 1709 aa4.79□□□□□ -1.64
RGPD1-203ENST00000428128 NEO1Q92859 1461 aa4.79□□□□□ -1.64
RGPD1-203ENST00000428128 APBB1O00213 710 aa4.78□□□□□ -1.64
RGPD1-203ENST00000428128 CANXP27824 592 aaKnown RBP4.78□□□□□ -1.64
RGPD1-203ENST00000428128 ZNF692Q9BU19 519 aaPredicted RBP4.78□□□□□ -1.64
RGPD1-203ENST00000428128 MFAP1P55081 439 aaKnown RBP4.78□□□□□ -1.64
RGPD1-203ENST00000428128 ARHGEF1Q92888 912 aaKnown RBP4.78□□□□□ -1.64
RGPD1-203ENST00000428128 AKT1S1Q96B36 256 aa4.78□□□□□ -1.64
RGPD1-203ENST00000428128 RNF25Q96BH1 459 aaPredicted RBP4.78□□□□□ -1.64
RGPD1-203ENST00000428128 STAG3Q9UJ98 1225 aa4.78□□□□□ -1.64
RGPD1-203ENST00000428128 PLXNC1O60486 1568 aa4.77□□□□□ -1.65
RGPD1-203ENST00000428128 LTBP4Q8N2S1 1624 aa4.77□□□□□ -1.65
RGPD1-203ENST00000428128 CCDC82Q8N4S0 544 aa4.77□□□□□ -1.65
RGPD1-203ENST00000428128 GOPCQ9HD26 462 aa4.77□□□□□ -1.65
RGPD1-203ENST00000428128 SPINK5Q9NQ38 1064 aaPredicted RBP4.76□□□□□ -1.65
RGPD1-203ENST00000428128 PTPN23Q9H3S7 1636 aa4.76□□□□□ -1.65
RGPD1-203ENST00000428128 PATL2C9JE40 543 aaKnown RBP4.76□□□□□ -1.65
RGPD1-203ENST00000428128 ILDR2Q71H61 639 aa4.76□□□□□ -1.65
RGPD1-203ENST00000428128 FNBP4Q8N3X1 1017 aaPredicted RBP4.76□□□□□ -1.65
RGPD1-203ENST00000428128 ARIH1Q9Y4X5 557 aaPredicted RBP4.76□□□□□ -1.65
RGPD1-203ENST00000428128 TMCO4Q5TGY1 634 aa4.76□□□□□ -1.65
RGPD1-203ENST00000428128 ITSN2Q9NZM3 1697 aa4.75□□□□□ -1.65
RGPD1-203ENST00000428128 AK7Q96M32 723 aa4.75□□□□□ -1.65
RGPD1-203ENST00000428128 COL24A1Q17RW2 1714 aa4.75□□□□□ -1.65
RGPD1-203ENST00000428128 E9PSI1 815 aa4.75□□□□□ -1.65
RGPD1-203ENST00000428128 FXR2P51116 673 aaKnown RBP eCLIP4.75□□□□□ -1.65
RGPD1-203ENST00000428128 ARID3AQ99856 593 aa4.75□□□□□ -1.65
RGPD1-203ENST00000428128 RYDENQ9NUL5 291 aaKnown RBP4.75□□□□□ -1.65
RGPD1-203ENST00000428128 ARID3CA6NKF2 412 aa4.74□□□□□ -1.65
RGPD1-203ENST00000428128 CAPN15O75808 1086 aa4.74□□□□□ -1.65
RGPD1-203ENST00000428128 FAM177A1Q8N128 213 aaPredicted RBP4.74□□□□□ -1.65
RGPD1-203ENST00000428128 EFCAB5A4FU69 1503 aa4.74□□□□□ -1.65
RGPD1-203ENST00000428128 PTPRTO14522 1441 aa4.74□□□□□ -1.65
RGPD1-203ENST00000428128 CLCN6P51797 869 aa4.74□□□□□ -1.65
RGPD1-203ENST00000428128 KDM4CQ9H3R0 1056 aa4.73□□□□□ -1.65
RGPD1-203ENST00000428128 SPHKAPQ2M3C7 1700 aa4.73□□□□□ -1.65
RGPD1-203ENST00000428128 CC2D2BQ6DHV5 1058 aa4.73□□□□□ -1.65
RGPD1-203ENST00000428128 SETD1AO15047 1707 aaKnown RBP4.73□□□□□ -1.65
RGPD1-203ENST00000428128 IRF5Q13568 498 aa4.73□□□□□ -1.65
RGPD1-203ENST00000428128 ZNF428Q96B54 188 aa4.72□□□□□ -1.65
RGPD1-203ENST00000428128 LRP5O75197 1615 aa4.72□□□□□ -1.65
RGPD1-203ENST00000428128 EIF2AK4Q9P2K8 1649 aaKnown RBP4.72□□□□□ -1.65
RGPD1-203ENST00000428128 ADGRL1O94910 1474 aa4.72□□□□□ -1.65
RGPD1-203ENST00000428128 SERPINA10Q9UK55 444 aa4.72□□□□□ -1.65
RGPD1-203ENST00000428128 DISP1Q96F81 1524 aa4.72□□□□□ -1.65
RGPD1-203ENST00000428128 ADGBQ8N7X0 1667 aa4.72□□□□□ -1.65
RGPD1-203ENST00000428128 KIF21BO75037 1637 aa4.72□□□□□ -1.65
RGPD1-203ENST00000428128 KCNA1Q09470 495 aa4.71□□□□□ -1.65
RGPD1-203ENST00000428128 PLA2R1Q13018 1463 aa4.71□□□□□ -1.66
RGPD1-203ENST00000428128 C3P01024 1663 aa4.71□□□□□ -1.66
RGPD1-203ENST00000428128 NWD1Q149M9 1564 aa4.7□□□□□ -1.66
RGPD1-203ENST00000428128 TAF7LQ5H9L4 462 aa4.7□□□□□ -1.66
RGPD1-203ENST00000428128 FOXD4L5Q5VV16 416 aaPredicted RBP4.7□□□□□ -1.66
RGPD1-203ENST00000428128 FOXD4L4Q8WXT5 416 aaPredicted RBP4.7□□□□□ -1.66
RGPD1-203ENST00000428128 CROCC2H7BZ55 1655 aa4.7□□□□□ -1.66
RGPD1-203ENST00000428128 DISP3Q9P2K9 1392 aa4.7□□□□□ -1.66
RGPD1-203ENST00000428128 RNF17Q9BXT8 1623 aaKnown RBP4.7□□□□□ -1.66
RGPD1-203ENST00000428128 KDM4FA0A1W2PPD8 638 aa4.7□□□□□ -1.66
RGPD1-203ENST00000428128 BCCIPQ9P287 314 aaKnown RBP eCLIP4.7□□□□□ -1.66
RGPD1-203ENST00000428128 XIRP1Q702N8 1843 aaKnown RBP4.7□□□□□ -1.66
RGPD1-203ENST00000428128 FHOD3Q2V2M9 1422 aa4.7□□□□□ -1.66
RGPD1-203ENST00000428128 RGPD3A6NKT7 1758 aaPredicted RBP4.7□□□□□ -1.66
RGPD1-203ENST00000428128 RGPD4Q7Z3J3 1758 aa4.7□□□□□ -1.66
RGPD1-203ENST00000428128 PLEKHG3A1L390 1219 aa4.7□□□□□ -1.66
RGPD1-203ENST00000428128 PDE4CQ08493 712 aa4.7□□□□□ -1.66
RGPD1-203ENST00000428128 CADPS2Q86UW7 1296 aa4.7□□□□□ -1.66
RGPD1-203ENST00000428128 RBM25P49756 843 aaKnown RBP4.69□□□□□ -1.66
RGPD1-203ENST00000428128 ALKQ9UM73 1620 aa4.69□□□□□ -1.66
RGPD1-203ENST00000428128 MYO5CQ9NQX4 1742 aa4.69□□□□□ -1.66
RGPD1-203ENST00000428128 CHRM1P11229 460 aaPredicted RBP4.69□□□□□ -1.66
RGPD1-203ENST00000428128 POLA2Q14181 598 aa4.69□□□□□ -1.66
RGPD1-203ENST00000428128 GZF1Q9H116 711 aaPredicted RBP4.69□□□□□ -1.66
RGPD1-203ENST00000428128 ZC3H4Q9UPT8 1303 aaKnown RBP4.69□□□□□ -1.66
RGPD1-203ENST00000428128 HECW1Q76N89 1606 aa4.69□□□□□ -1.66
RGPD1-203ENST00000428128 RIOK3O14730 519 aaKnown RBP4.69□□□□□ -1.66
RGPD1-203ENST00000428128 PCDH10Q9P2E7 1040 aa4.69□□□□□ -1.66
RGPD1-203ENST00000428128 INO80Q9ULG1 1556 aaPredicted RBP4.68□□□□□ -1.66
RGPD1-203ENST00000428128 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.68□□□□□ -1.66
RGPD1-203ENST00000428128 TRIM66O15016 1216 aa4.67□□□□□ -1.66
RGPD1-203ENST00000428128 GPBP1L1Q9HC44 474 aaPredicted RBP4.67□□□□□ -1.66
RGPD1-203ENST00000428128 PREX2Q70Z35 1606 aa4.67□□□□□ -1.66
RGPD1-203ENST00000428128 MAST1Q9Y2H9 1570 aa4.67□□□□□ -1.66
RGPD1-203ENST00000428128 IL27Q8NEV9 243 aa4.67□□□□□ -1.66
RGPD1-203ENST00000428128 DHX37Q8IY37 1157 aaKnown RBP4.67□□□□□ -1.66
RGPD1-203ENST00000428128 MROH1Q8NDA8 1641 aa4.67□□□□□ -1.66
RGPD1-203ENST00000428128 KDM5DQ9BY66 1539 aa4.67□□□□□ -1.66
RGPD1-203ENST00000428128 SHPRHQ149N8 1683 aa4.66□□□□□ -1.66
RGPD1-203ENST00000428128 MYO3AQ8NEV4 1616 aa4.66□□□□□ -1.66
RGPD1-203ENST00000428128 PPP1R15AO75807 674 aaPredicted RBP4.66□□□□□ -1.66
RGPD1-203ENST00000428128 PIP4P2Q8N4L2 257 aa4.66□□□□□ -1.66
RGPD1-203ENST00000428128 RAPGEF6Q8TEU7 1601 aa4.66□□□□□ -1.66
RGPD1-203ENST00000428128 MADDQ8WXG6 1647 aa4.66□□□□□ -1.66
RGPD1-203ENST00000428128 RBM47A0AV96 593 aaKnown RBP4.66□□□□□ -1.66
RGPD1-203ENST00000428128 CYB5RLQ6IPT4 315 aa4.66□□□□□ -1.66
RGPD1-203ENST00000428128 ZBTB12Q9Y330 459 aaPredicted RBP4.66□□□□□ -1.66
RGPD1-203ENST00000428128 SOGA1O94964 1423 aa4.66□□□□□ -1.66
RGPD1-203ENST00000428128 PDE4DQ08499 809 aa4.65□□□□□ -1.66
RGPD1-203ENST00000428128 RETREG2Q8NC44 543 aa4.65□□□□□ -1.66
RGPD1-203ENST00000428128 C8orf37Q96NL8 207 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms