RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 ITPRIPQ8IWB1 547 aa12.51□□□□□ -0.41
CLTCL1-202ENST00000427926 SETD5Q9C0A6 1442 aa12.51□□□□□ -0.41
CLTCL1-202ENST00000427926 FANCD2Q9BXW9 1451 aa12.5□□□□□ -0.41
CLTCL1-202ENST00000427926 SUPT16HQ9Y5B9 1047 aaKnown RBP12.5□□□□□ -0.41
CLTCL1-202ENST00000427926 CCDC34Q96HJ3 373 aa12.5□□□□□ -0.41
CLTCL1-202ENST00000427926 TCEAL9Q9UHQ7 104 aa12.5□□□□□ -0.41
CLTCL1-202ENST00000427926 RAD21O60216 631 aa12.5□□□□□ -0.41
CLTCL1-202ENST00000427926 HSP90B1P14625 803 aaKnown RBP12.5□□□□□ -0.41
CLTCL1-202ENST00000427926 TRAK1Q9UPV9 953 aa12.5□□□□□ -0.41
CLTCL1-202ENST00000427926 HMMRO75330 724 aa12.49□□□□□ -0.41
CLTCL1-202ENST00000427926 AMOTL1Q8IY63 956 aa12.49□□□□□ -0.41
CLTCL1-202ENST00000427926 COG3Q96JB2 828 aa12.49□□□□□ -0.41
CLTCL1-202ENST00000427926 TEFQ10587 303 aa12.48□□□□□ -0.41
CLTCL1-202ENST00000427926 VGFO15240 615 aaPredicted RBP12.48□□□□□ -0.41
CLTCL1-202ENST00000427926 AMER1Q5JTC6 1135 aaPredicted RBP12.48□□□□□ -0.41
CLTCL1-202ENST00000427926 CNKSR2Q8WXI2 1034 aa12.48□□□□□ -0.41
CLTCL1-202ENST00000427926 HTATSF1O43719 755 aaKnown RBP12.48□□□□□ -0.41
CLTCL1-202ENST00000427926 PTPRGP23470 1445 aa12.47□□□□□ -0.41
CLTCL1-202ENST00000427926 CC2D2AQ9P2K1 1620 aa12.47□□□□□ -0.41
CLTCL1-202ENST00000427926 RAPGEF2Q9Y4G8 1499 aa12.47□□□□□ -0.41
CLTCL1-202ENST00000427926 TRIM6-TRIM34B2RNG4 842 aa12.46□□□□□ -0.41
CLTCL1-202ENST00000427926 DRC7Q8IY82 874 aa12.46□□□□□ -0.41
CLTCL1-202ENST00000427926 PPP1R1BQ9UD71 204 aaPredicted RBP12.46□□□□□ -0.41
CLTCL1-202ENST00000427926 WASHC2AQ641Q2 1341 aa12.46□□□□□ -0.42
CLTCL1-202ENST00000427926 NGEFQ8N5V2 710 aa12.45□□□□□ -0.42
CLTCL1-202ENST00000427926 VPS37DQ86XT2 251 aa12.45□□□□□ -0.42
CLTCL1-202ENST00000427926 MPHOSPH9Q99550 1183 aa12.45□□□□□ -0.42
CLTCL1-202ENST00000427926 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.44□□□□□ -0.42
CLTCL1-202ENST00000427926 FHOD3Q2V2M9 1422 aa12.44□□□□□ -0.42
CLTCL1-202ENST00000427926 PDE4CQ08493 712 aa12.44□□□□□ -0.42
CLTCL1-202ENST00000427926 NOC3LQ8WTT2 800 aaKnown RBP12.44□□□□□ -0.42
CLTCL1-202ENST00000427926 SMC4Q9NTJ3 1288 aa12.44□□□□□ -0.42
CLTCL1-202ENST00000427926 CCDC18Q5T9S5 1454 aa12.43□□□□□ -0.42
CLTCL1-202ENST00000427926 NEXNQ0ZGT2 675 aa12.43□□□□□ -0.42
CLTCL1-202ENST00000427926 RBM33Q96EV2 1170 aaKnown RBP12.43□□□□□ -0.42
CLTCL1-202ENST00000427926 HSPA5P11021 654 aaKnown RBP12.42□□□□□ -0.42
CLTCL1-202ENST00000427926 B4GALNT3Q6L9W6 998 aa12.42□□□□□ -0.42
CLTCL1-202ENST00000427926 CEP89Q96ST8 783 aa12.42□□□□□ -0.42
CLTCL1-202ENST00000427926 UACAQ9BZF9 1416 aa12.42□□□□□ -0.42
CLTCL1-202ENST00000427926 RWDD1Q9H446 243 aaPredicted RBP12.42□□□□□ -0.42
CLTCL1-202ENST00000427926 MINK1Q8N4C8 1332 aaPredicted RBP12.4□□□□□ -0.42
CLTCL1-202ENST00000427926 RAPGEF4Q8WZA2 1011 aa12.4□□□□□ -0.42
CLTCL1-202ENST00000427926 RALBP1Q15311 655 aa12.39□□□□□ -0.43
CLTCL1-202ENST00000427926 HMGXB3Q12766 1538 aa12.39□□□□□ -0.43
CLTCL1-202ENST00000427926 RAB3GAP2Q9H2M9 1393 aa12.39□□□□□ -0.43
CLTCL1-202ENST00000427926 EVC2Q86UK5 1308 aa12.39□□□□□ -0.43
CLTCL1-202ENST00000427926 AKAP17AQ02040 695 aaKnown RBP12.39□□□□□ -0.43
CLTCL1-202ENST00000427926 PPP4R2Q9NY27 417 aa12.39□□□□□ -0.43
CLTCL1-202ENST00000427926 TPM4P67936 248 aa12.38□□□□□ -0.43
CLTCL1-202ENST00000427926 ERICH6BQ5W0A0 696 aa12.38□□□□□ -0.43
CLTCL1-202ENST00000427926 CCER2I3L3R5 266 aa12.38□□□□□ -0.43
CLTCL1-202ENST00000427926 DHX16O60231 1041 aaKnown RBP12.38□□□□□ -0.43
CLTCL1-202ENST00000427926 CREBRFQ8IUR6 639 aa12.38□□□□□ -0.43
CLTCL1-202ENST00000427926 SPRYD3Q8NCJ5 442 aa12.37□□□□□ -0.43
CLTCL1-202ENST00000427926 LRRFIP1Q32MZ4 808 aaKnown RBP12.37□□□□□ -0.43
CLTCL1-202ENST00000427926 NLRP2Q9NX02 1062 aa12.37□□□□□ -0.43
CLTCL1-202ENST00000427926 NUTM2BA6NNL0 878 aaPredicted RBP12.37□□□□□ -0.43
CLTCL1-202ENST00000427926 NUTM2EB1AL46 878 aaPredicted RBP12.37□□□□□ -0.43
CLTCL1-202ENST00000427926 NUTM2AQ8IVF1 878 aaPredicted RBP12.37□□□□□ -0.43
CLTCL1-202ENST00000427926 EIF2S2P20042 333 aaKnown RBP12.37□□□□□ -0.43
CLTCL1-202ENST00000427926 SAMD1Q6SPF0 538 aaPredicted RBP12.37□□□□□ -0.43
CLTCL1-202ENST00000427926 PODXL2Q9NZ53 605 aa12.36□□□□□ -0.43
CLTCL1-202ENST00000427926 PIP4K2BP78356 416 aa12.36□□□□□ -0.43
CLTCL1-202ENST00000427926 PROSER2Q86WR7 435 aaPredicted RBP12.36□□□□□ -0.43
CLTCL1-202ENST00000427926 SYNE3Q6ZMZ3 975 aa12.36□□□□□ -0.43
CLTCL1-202ENST00000427926 WWC1Q8IX03 1113 aa12.36□□□□□ -0.43
CLTCL1-202ENST00000427926 CCAR1Q8IX12 1150 aaKnown RBP12.36□□□□□ -0.43
CLTCL1-202ENST00000427926 USP35Q9P2H5 1018 aa12.36□□□□□ -0.43
CLTCL1-202ENST00000427926 KIF3AQ9Y496 699 aa12.36□□□□□ -0.43
CLTCL1-202ENST00000427926 RUSC2Q8N2Y8 1516 aa12.35□□□□□ -0.43
CLTCL1-202ENST00000427926 CCDC144AA2RUR9 1427 aa12.35□□□□□ -0.43
CLTCL1-202ENST00000427926 CCDC146Q8IYE0 955 aa12.34□□□□□ -0.43
CLTCL1-202ENST00000427926 DDX58O95786 925 aaKnown RBP12.34□□□□□ -0.43
CLTCL1-202ENST00000427926 C9orf78Q9NZ63 289 aaPredicted RBP12.34□□□□□ -0.43
CLTCL1-202ENST00000427926 MRC2Q9UBG0 1479 aa12.34□□□□□ -0.43
CLTCL1-202ENST00000427926 CGNL1Q0VF96 1302 aa12.33□□□□□ -0.44
CLTCL1-202ENST00000427926 CCDC43Q96MW1 224 aaKnown RBP12.33□□□□□ -0.44
CLTCL1-202ENST00000427926 ANO8Q9HCE9 1232 aaPredicted RBP12.33□□□□□ -0.44
CLTCL1-202ENST00000427926 PMFBP1Q8TBY8 1022 aa12.32□□□□□ -0.44
CLTCL1-202ENST00000427926 CLUAP1Q96AJ1 413 aa12.31□□□□□ -0.44
CLTCL1-202ENST00000427926 ELL2O00472 640 aaPredicted RBP12.31□□□□□ -0.44
CLTCL1-202ENST00000427926 APPP05067 770 aa12.31□□□□□ -0.44
CLTCL1-202ENST00000427926 SF3A1Q15459 793 aaKnown RBP12.31□□□□□ -0.44
CLTCL1-202ENST00000427926 GPRASP1Q5JY77 1395 aa12.31□□□□□ -0.44
CLTCL1-202ENST00000427926 KIF16BQ96L93 1317 aa12.3□□□□□ -0.44
CLTCL1-202ENST00000427926 STRN4Q9NRL3 753 aa12.3□□□□□ -0.44
CLTCL1-202ENST00000427926 A0A0U1RQG5 324 aaPredicted RBP12.3□□□□□ -0.44
CLTCL1-202ENST00000427926 NOL8Q76FK4 1167 aaKnown RBP12.3□□□□□ -0.44
CLTCL1-202ENST00000427926 CHMP4CQ96CF2 233 aa12.3□□□□□ -0.44
CLTCL1-202ENST00000427926 ESCO1Q5FWF5 840 aa12.29□□□□□ -0.44
CLTCL1-202ENST00000427926 CENPJQ9HC77 1338 aaPredicted RBP12.29□□□□□ -0.44
CLTCL1-202ENST00000427926 PES1O00541 588 aaKnown RBP12.29□□□□□ -0.44
CLTCL1-202ENST00000427926 NUTM2GQ5VZR2 741 aa12.28□□□□□ -0.44
CLTCL1-202ENST00000427926 CSPP1Q1MSJ5 1256 aa12.28□□□□□ -0.44
CLTCL1-202ENST00000427926 BICRAQ9NZM4 1560 aa12.28□□□□□ -0.44
CLTCL1-202ENST00000427926 CPLX2Q6PUV4 134 aaKnown RBP12.28□□□□□ -0.44
CLTCL1-202ENST00000427926 RCAN3Q9UKA8 241 aa12.28□□□□□ -0.44
CLTCL1-202ENST00000427926 FGD5Q6ZNL6 1462 aa12.28□□□□□ -0.44
CLTCL1-202ENST00000427926 SYAP1Q96A49 352 aaPredicted RBP12.27□□□□□ -0.44
CLTCL1-202ENST00000427926 RRP7AQ9Y3A4 280 aaKnown RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms