RNA–Protein interactions for RNA: ENST00000427862.1

GCFC2-203, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-203ENST00000427862 FBXW7Q969H0 707 aa10.91□□□□□ -0.66
GCFC2-203ENST00000427862 ZDHHC16Q969W1 377 aa10.91□□□□□ -0.66
GCFC2-203ENST00000427862 ADAM33Q9BZ11 813 aa10.91□□□□□ -0.66
GCFC2-203ENST00000427862 MAP3K7O43318 606 aa10.9□□□□□ -0.66
GCFC2-203ENST00000427862 FCHSD2O94868 740 aa10.89□□□□□ -0.67
GCFC2-203ENST00000427862 GNPATO15228 680 aa10.88□□□□□ -0.67
GCFC2-203ENST00000427862 C6orf132Q5T0Z8 1188 aa10.88□□□□□ -0.67
GCFC2-203ENST00000427862 HIC1Q14526 733 aa10.87□□□□□ -0.67
GCFC2-203ENST00000427862 KRI1Q8N9T8 703 aaKnown RBP10.87□□□□□ -0.67
GCFC2-203ENST00000427862 MMRN1Q13201 1228 aa10.86□□□□□ -0.67
GCFC2-203ENST00000427862 SPNS2Q8IVW8 549 aa10.84□□□□□ -0.67
GCFC2-203ENST00000427862 AK7Q96M32 723 aa10.84□□□□□ -0.67
GCFC2-203ENST00000427862 IRF6O14896 467 aa10.83□□□□□ -0.68
GCFC2-203ENST00000427862 MINK1Q8N4C8 1332 aaPredicted RBP10.83□□□□□ -0.68
GCFC2-203ENST00000427862 PSDA5PKW4 1024 aaPredicted RBP10.82□□□□□ -0.68
GCFC2-203ENST00000427862 MAP2K5Q13163 448 aa10.82□□□□□ -0.68
GCFC2-203ENST00000427862 PPP4R3BQ5MIZ7 849 aa10.82□□□□□ -0.68
GCFC2-203ENST00000427862 TRIM66O15016 1216 aa10.81□□□□□ -0.68
GCFC2-203ENST00000427862 BRPF1P55201 1214 aaPredicted RBP10.81□□□□□ -0.68
GCFC2-203ENST00000427862 BCL2L12Q9HB09 334 aa10.81□□□□□ -0.68
GCFC2-203ENST00000427862 COL9A1P20849 921 aa10.8□□□□□ -0.68
GCFC2-203ENST00000427862 CCDC102AQ96A19 550 aa10.79□□□□□ -0.68
GCFC2-203ENST00000427862 MARVELD3Q96A59 401 aa10.79□□□□□ -0.68
GCFC2-203ENST00000427862 TTC13Q8NBP0 860 aa10.78□□□□□ -0.68
GCFC2-203ENST00000427862 POTEEQ6S8J3 1075 aa10.77□□□□□ -0.69
GCFC2-203ENST00000427862 POTEB3A0JP26 581 aa10.76□□□□□ -0.69
GCFC2-203ENST00000427862 POTEBQ6S5H4 581 aa10.76□□□□□ -0.69
GCFC2-203ENST00000427862 CERKQ8TCT0 537 aa10.76□□□□□ -0.69
GCFC2-203ENST00000427862 FAM198AQ9UFP1 575 aa10.76□□□□□ -0.69
GCFC2-203ENST00000427862 ERBB3P21860 1342 aa10.76□□□□□ -0.69
GCFC2-203ENST00000427862 VARS2Q5ST30 1063 aaKnown RBP10.75□□□□□ -0.69
GCFC2-203ENST00000427862 PADI6Q6TGC4 694 aa10.75□□□□□ -0.69
GCFC2-203ENST00000427862 PTPREP23469 700 aa10.74□□□□□ -0.69
GCFC2-203ENST00000427862 PRSS12P56730 875 aa10.74□□□□□ -0.69
GCFC2-203ENST00000427862 PDE4DQ08499 809 aa10.74□□□□□ -0.69
GCFC2-203ENST00000427862 FAM161AQ3B820 660 aa10.74□□□□□ -0.69
GCFC2-203ENST00000427862 EMP3P54852 163 aa10.73□□□□□ -0.69
GCFC2-203ENST00000427862 NEUROD2Q15784 382 aa10.73□□□□□ -0.69
GCFC2-203ENST00000427862 CDCA7LQ96GN5 454 aa10.73□□□□□ -0.69
GCFC2-203ENST00000427862 PHOX2BQ99453 314 aa10.72□□□□□ -0.69
GCFC2-203ENST00000427862 FAM205CA6NFA0 338 aa10.71□□□□□ -0.69
GCFC2-203ENST00000427862 PPP1R3GB7ZBB8 358 aa10.71□□□□□ -0.69
GCFC2-203ENST00000427862 PSEN2P49810 448 aa10.71□□□□□ -0.69
GCFC2-203ENST00000427862 GPBP1L1Q9HC44 474 aaPredicted RBP10.71□□□□□ -0.69
GCFC2-203ENST00000427862 RBM27Q9P2N5 1060 aaKnown RBP10.71□□□□□ -0.69
GCFC2-203ENST00000427862 C3orf80F5H4A9 247 aa10.7□□□□□ -0.7
GCFC2-203ENST00000427862 KCNK17Q96T54 332 aa10.7□□□□□ -0.7
GCFC2-203ENST00000427862 TSKSQ9UJT2 592 aa10.7□□□□□ -0.7
GCFC2-203ENST00000427862 ADGRG1Q9Y653 693 aa10.7□□□□□ -0.7
GCFC2-203ENST00000427862 AMHR2Q16671 573 aa10.69□□□□□ -0.7
GCFC2-203ENST00000427862 ZNF687Q8N1G0 1237 aa10.68□□□□□ -0.7
GCFC2-203ENST00000427862 AXIN2Q9Y2T1 843 aa10.68□□□□□ -0.7
GCFC2-203ENST00000427862 PROX2Q3B8N5 592 aa10.67□□□□□ -0.7
GCFC2-203ENST00000427862 HS3ST6Q96QI5 342 aa10.67□□□□□ -0.7
GCFC2-203ENST00000427862 REPIN1Q9BWE0 567 aaKnown RBP10.67□□□□□ -0.7
GCFC2-203ENST00000427862 ARHGAP33O14559 1287 aa10.66□□□□□ -0.7
GCFC2-203ENST00000427862 DMRTA1Q5VZB9 504 aa10.66□□□□□ -0.7
GCFC2-203ENST00000427862 ZBED2Q9BTP6 218 aa10.66□□□□□ -0.7
GCFC2-203ENST00000427862 TRIM6-TRIM34B2RNG4 842 aa10.65□□□□□ -0.7
GCFC2-203ENST00000427862 METTL3Q86U44 580 aaKnown RBP10.65□□□□□ -0.7
GCFC2-203ENST00000427862 PARP9Q8IXQ6 854 aa10.65□□□□□ -0.7
GCFC2-203ENST00000427862 PXYLP1Q8TE99 480 aa10.65□□□□□ -0.7
GCFC2-203ENST00000427862 TMUB1Q9BVT8 246 aa10.65□□□□□ -0.7
GCFC2-203ENST00000427862 KDM4CQ9H3R0 1056 aa10.65□□□□□ -0.7
GCFC2-203ENST00000427862 OATP04181 439 aa10.64□□□□□ -0.71
GCFC2-203ENST00000427862 NLRP7Q8WX94 980 aa10.64□□□□□ -0.71
GCFC2-203ENST00000427862 EYA1Q99502 592 aa10.64□□□□□ -0.71
GCFC2-203ENST00000427862 ONECUT3O60422 494 aaPredicted RBP10.62□□□□□ -0.71
GCFC2-203ENST00000427862 NUDT18Q6ZVK8 323 aa10.61□□□□□ -0.71
GCFC2-203ENST00000427862 PBX2P40425 430 aa10.6□□□□□ -0.71
GCFC2-203ENST00000427862 MDM2Q00987 491 aaPredicted RBP10.6□□□□□ -0.71
GCFC2-203ENST00000427862 TMEM132AQ24JP5 1023 aa10.6□□□□□ -0.71
GCFC2-203ENST00000427862 TATDN2Q93075 761 aa10.6□□□□□ -0.71
GCFC2-203ENST00000427862 SLC4A5Q9BY07 1137 aa10.6□□□□□ -0.71
GCFC2-203ENST00000427862 KIAA1468Q9P260 1216 aa10.6□□□□□ -0.71
GCFC2-203ENST00000427862 KRTAP3-3Q9BYR6 98 aa10.59□□□□□ -0.71
GCFC2-203ENST00000427862 KRTAP3-2Q9BYR7 98 aa10.59□□□□□ -0.71
GCFC2-203ENST00000427862 SMAPO00193 183 aa10.58□□□□□ -0.72
GCFC2-203ENST00000427862 GIGYF2Q6Y7W6 1299 aaKnown RBP10.58□□□□□ -0.72
GCFC2-203ENST00000427862 PACS2Q86VP3 889 aa10.58□□□□□ -0.72
GCFC2-203ENST00000427862 RBM46Q8TBY0 533 aaKnown RBP10.58□□□□□ -0.72
GCFC2-203ENST00000427862 FAM117AQ9C073 453 aa10.58□□□□□ -0.72
GCFC2-203ENST00000427862 PNMA3Q9UL41 463 aa10.58□□□□□ -0.72
GCFC2-203ENST00000427862 MS4A1P11836 297 aa10.57□□□□□ -0.72
GCFC2-203ENST00000427862 TTLL12Q14166 644 aaPredicted RBP10.57□□□□□ -0.72
GCFC2-203ENST00000427862 KCNH8Q96L42 1107 aa10.57□□□□□ -0.72
GCFC2-203ENST00000427862 VPS9D1Q9Y2B5 631 aa10.57□□□□□ -0.72
GCFC2-203ENST00000427862 RCCD1A6NED2 376 aa10.56□□□□□ -0.72
GCFC2-203ENST00000427862 IL27Q8NEV9 243 aa10.56□□□□□ -0.72
GCFC2-203ENST00000427862 GPCPD1Q9NPB8 672 aa10.55□□□□□ -0.72
GCFC2-203ENST00000427862 PLEKHG3A1L390 1219 aa10.54□□□□□ -0.72
GCFC2-203ENST00000427862 NBPF26B4DH59 902 aa10.54□□□□□ -0.72
GCFC2-203ENST00000427862 CLCN1P35523 988 aa10.54□□□□□ -0.72
GCFC2-203ENST00000427862 RABGEF1Q9UJ41 708 aa10.54□□□□□ -0.72
GCFC2-203ENST00000427862 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.53□□□□□ -0.72
GCFC2-203ENST00000427862 BHMG1C9JSJ3 638 aaPredicted RBP10.52□□□□□ -0.73
GCFC2-203ENST00000427862 SSTR3P32745 418 aaPredicted RBP10.52□□□□□ -0.73
GCFC2-203ENST00000427862 FAM217BQ9NTX9 383 aaPredicted RBP10.52□□□□□ -0.73
GCFC2-203ENST00000427862 TK2O00142 265 aa10.5□□□□□ -0.73
GCFC2-203ENST00000427862 LSM11P83369 360 aaKnown RBP eCLIP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms