RNA–Protein interactions for RNA: ENST00000427738.7

CYLD-203, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 5 BASIC

Gene CYLD, Length 8,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-203ENST00000427738 NASPP49321 788 aaPredicted RBP8.13□□□□□ -1.11
CYLD-203ENST00000427738 VPS53Q5VIR6 699 aa8.13□□□□□ -1.11
CYLD-203ENST00000427738 PATL2C9JE40 543 aaKnown RBP8.12□□□□□ -1.11
CYLD-203ENST00000427738 HIRIP3Q9BW71 556 aaPredicted RBP8.12□□□□□ -1.11
CYLD-203ENST00000427738 HOOK1Q9UJC3 728 aaKnown RBP8.12□□□□□ -1.11
CYLD-203ENST00000427738 LRRFIP1Q32MZ4 808 aaKnown RBP8.12□□□□□ -1.11
CYLD-203ENST00000427738 R3HCC1Q9Y3T6 440 aaKnown RBP8.12□□□□□ -1.11
CYLD-203ENST00000427738 TAF7LQ5H9L4 462 aa8.12□□□□□ -1.11
CYLD-203ENST00000427738 DYDC1Q8WWB3 177 aa8.12□□□□□ -1.11
CYLD-203ENST00000427738 MNS1Q8NEH6 495 aa8.12□□□□□ -1.11
CYLD-203ENST00000427738 BECN2A8MW95 431 aa8.12□□□□□ -1.11
CYLD-203ENST00000427738 CCP110O43303 1012 aa8.12□□□□□ -1.11
CYLD-203ENST00000427738 GOLGA3Q08378 1498 aa8.11□□□□□ -1.11
CYLD-203ENST00000427738 GOLGA6L7A0A1B0GV03 622 aa8.11□□□□□ -1.11
CYLD-203ENST00000427738 NEXNQ0ZGT2 675 aa8.11□□□□□ -1.11
CYLD-203ENST00000427738 CCAR2Q8N163 923 aaKnown RBP8.11□□□□□ -1.11
CYLD-203ENST00000427738 KANK1Q14678 1352 aa8.11□□□□□ -1.11
CYLD-203ENST00000427738 CC2D1BQ5T0F9 858 aaKnown RBP8.11□□□□□ -1.11
CYLD-203ENST00000427738 CAGE1Q8TC20 777 aa8.11□□□□□ -1.11
CYLD-203ENST00000427738 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.11□□□□□ -1.11
CYLD-203ENST00000427738 AMOTL1Q8IY63 956 aa8.11□□□□□ -1.11
CYLD-203ENST00000427738 CEP162Q5TB80 1403 aa8.1□□□□□ -1.11
CYLD-203ENST00000427738 NFKBIBQ15653 356 aa8.1□□□□□ -1.11
CYLD-203ENST00000427738 ODF2Q5BJF6 829 aa8.1□□□□□ -1.11
CYLD-203ENST00000427738 ZNF592Q92610 1267 aa8.1□□□□□ -1.11
CYLD-203ENST00000427738 KIAA0754O94854 1291 aa8.1□□□□□ -1.11
CYLD-203ENST00000427738 SF3A1Q15459 793 aaKnown RBP8.1□□□□□ -1.11
CYLD-203ENST00000427738 HOMER1Q86YM7 354 aa8.1□□□□□ -1.11
CYLD-203ENST00000427738 CREBRFQ8IUR6 639 aa8.1□□□□□ -1.11
CYLD-203ENST00000427738 FAM107BQ9H098 131 aa8.1□□□□□ -1.11
CYLD-203ENST00000427738 CHIC2Q9UKJ5 165 aa8.1□□□□□ -1.11
CYLD-203ENST00000427738 AKAP17AQ02040 695 aaKnown RBP8.09□□□□□ -1.11
CYLD-203ENST00000427738 CTDP1Q9Y5B0 961 aaPredicted RBP8.09□□□□□ -1.11
CYLD-203ENST00000427738 RALBP1Q15311 655 aa8.09□□□□□ -1.11
CYLD-203ENST00000427738 SPAG9O60271 1321 aaKnown RBP8.09□□□□□ -1.11
CYLD-203ENST00000427738 MFAP1P55081 439 aaKnown RBP8.09□□□□□ -1.11
CYLD-203ENST00000427738 NUCB2P80303 420 aa8.09□□□□□ -1.11
CYLD-203ENST00000427738 U2SURPO15042 1029 aaKnown RBP8.09□□□□□ -1.11
CYLD-203ENST00000427738 HSP90AB3PQ58FF7 597 aa8.09□□□□□ -1.11
CYLD-203ENST00000427738 GIMAP7Q8NHV1 300 aa8.09□□□□□ -1.11
CYLD-203ENST00000427738 MYO15BQ96JP2 1530 aa8.09□□□□□ -1.12
CYLD-203ENST00000427738 KTN1Q86UP2 1357 aaKnown RBP8.08□□□□□ -1.12
CYLD-203ENST00000427738 LETM1O95202 739 aaPredicted RBP8.08□□□□□ -1.12
CYLD-203ENST00000427738 ZMYND15Q9H091 742 aa8.08□□□□□ -1.12
CYLD-203ENST00000427738 DNAJC2Q99543 621 aaKnown RBP8.08□□□□□ -1.12
CYLD-203ENST00000427738 TRIM34Q9BYJ4 488 aa8.08□□□□□ -1.12
CYLD-203ENST00000427738 EIF3JO75822 258 aaKnown RBP8.07□□□□□ -1.12
CYLD-203ENST00000427738 IFT57Q9NWB7 429 aa8.07□□□□□ -1.12
CYLD-203ENST00000427738 SSR1P43307 286 aaKnown RBP8.07□□□□□ -1.12
CYLD-203ENST00000427738 IRX3P78415 501 aaPredicted RBP8.07□□□□□ -1.12
CYLD-203ENST00000427738 CHMP7Q8WUX9 453 aaPredicted RBP8.07□□□□□ -1.12
CYLD-203ENST00000427738 NEUROD2Q15784 382 aa8.07□□□□□ -1.12
CYLD-203ENST00000427738 RNF20Q5VTR2 975 aa8.07□□□□□ -1.12
CYLD-203ENST00000427738 NOL10Q9BSC4 688 aaKnown RBP8.07□□□□□ -1.12
CYLD-203ENST00000427738 CARD11Q9BXL7 1154 aa8.07□□□□□ -1.12
CYLD-203ENST00000427738 IL27Q8NEV9 243 aa8.06□□□□□ -1.12
CYLD-203ENST00000427738 ZBED9Q6R2W3 1325 aa8.06□□□□□ -1.12
CYLD-203ENST00000427738 PLEKHD1A6NEE1 506 aa8.06□□□□□ -1.12
CYLD-203ENST00000427738 ANKRD18AQ8IVF6 992 aa8.06□□□□□ -1.12
CYLD-203ENST00000427738 DDX11Q96FC9 970 aa8.06□□□□□ -1.12
CYLD-203ENST00000427738 CT47A1Q5JQC4 288 aaPredicted RBP8.06□□□□□ -1.12
CYLD-203ENST00000427738 TMF1P82094 1093 aa8.06□□□□□ -1.12
CYLD-203ENST00000427738 H3BQV1 296 aa8.05□□□□□ -1.12
CYLD-203ENST00000427738 IFFO2Q5TF58 517 aa8.05□□□□□ -1.12
CYLD-203ENST00000427738 SYNE3Q6ZMZ3 975 aa8.05□□□□□ -1.12
CYLD-203ENST00000427738 PABPN1Q86U42 306 aaKnown RBP eCLIP8.05□□□□□ -1.12
CYLD-203ENST00000427738 CCDC43Q96MW1 224 aaKnown RBP8.05□□□□□ -1.12
CYLD-203ENST00000427738 FBXO3Q9UK99 471 aa8.05□□□□□ -1.12
CYLD-203ENST00000427738 BRPF3Q9ULD4 1205 aa8.05□□□□□ -1.12
CYLD-203ENST00000427738 MBD3O95983 291 aa8.05□□□□□ -1.12
CYLD-203ENST00000427738 WWC2Q6AWC2 1192 aa8.05□□□□□ -1.12
CYLD-203ENST00000427738 CTR9Q6PD62 1173 aa8.05□□□□□ -1.12
CYLD-203ENST00000427738 CPLX2Q6PUV4 134 aaKnown RBP8.05□□□□□ -1.12
CYLD-203ENST00000427738 AAMPQ13685 434 aa8.05□□□□□ -1.12
CYLD-203ENST00000427738 ROCK2O75116 1388 aaKnown RBP8.05□□□□□ -1.12
CYLD-203ENST00000427738 UQCRHLA0A096LP55 91 aa8.04□□□□□ -1.12
CYLD-203ENST00000427738 UQCRHP07919 91 aa8.04□□□□□ -1.12
CYLD-203ENST00000427738 ESPNB1AK53 854 aa8.04□□□□□ -1.12
CYLD-203ENST00000427738 STK31Q9BXU1 1019 aa8.04□□□□□ -1.12
CYLD-203ENST00000427738 NAT10Q9H0A0 1025 aaKnown RBP8.04□□□□□ -1.12
CYLD-203ENST00000427738 FRAT2O75474 233 aaPredicted RBP8.04□□□□□ -1.12
CYLD-203ENST00000427738 AXDND1Q5T1B0 1012 aaPredicted RBP8.04□□□□□ -1.12
CYLD-203ENST00000427738 PDIA4P13667 645 aaKnown RBP8.03□□□□□ -1.12
CYLD-203ENST00000427738 BBXQ8WY36 941 aaPredicted RBP8.03□□□□□ -1.12
CYLD-203ENST00000427738 PCMTD1Q96MG8 357 aaPredicted RBP8.03□□□□□ -1.12
CYLD-203ENST00000427738 CWC22Q9HCG8 908 aaKnown RBP8.03□□□□□ -1.12
CYLD-203ENST00000427738 HDGFL2Q7Z4V5 671 aaPredicted RBP8.03□□□□□ -1.12
CYLD-203ENST00000427738 SEPT11Q9NVA2 429 aaKnown RBP8.03□□□□□ -1.12
CYLD-203ENST00000427738 TRIM6-TRIM34B2RNG4 842 aa8.03□□□□□ -1.12
CYLD-203ENST00000427738 ERLIN1O75477 346 aa8.03□□□□□ -1.12
CYLD-203ENST00000427738 TRIM29Q14134 588 aa8.03□□□□□ -1.12
CYLD-203ENST00000427738 CHMP3Q9Y3E7 222 aa8.03□□□□□ -1.12
CYLD-203ENST00000427738 TNIKQ9UKE5 1360 aa8.02□□□□□ -1.12
CYLD-203ENST00000427738 FAM184AQ8NB25 1140 aa8.02□□□□□ -1.12
CYLD-203ENST00000427738 CGNL1Q0VF96 1302 aa8.02□□□□□ -1.13
CYLD-203ENST00000427738 MEX3CQ5U5Q3 659 aaKnown RBP8.02□□□□□ -1.13
CYLD-203ENST00000427738 REC8O95072 547 aa8.02□□□□□ -1.13
CYLD-203ENST00000427738 WWC1Q8IX03 1113 aa8.02□□□□□ -1.13
CYLD-203ENST00000427738 EIF3AQ14152 1382 aaKnown RBP8.02□□□□□ -1.13
CYLD-203ENST00000427738 DCAF8L1A6NGE4 600 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms