RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 SPAG9O60271 1321 aaKnown RBP12.24□□□□□ -0.45
SH3D19-204ENST00000427414 KIDINS220Q9ULH0 1771 aa12.24□□□□□ -0.45
SH3D19-204ENST00000427414 TRIM52Q96A61 297 aa12.24□□□□□ -0.45
SH3D19-204ENST00000427414 ZMYM4Q5VZL5 1548 aa12.23□□□□□ -0.45
SH3D19-204ENST00000427414 TONSLQ96HA7 1378 aa12.23□□□□□ -0.45
SH3D19-204ENST00000427414 PPP1R15AO75807 674 aaPredicted RBP12.23□□□□□ -0.45
SH3D19-204ENST00000427414 MIER1Q8N108 512 aa12.23□□□□□ -0.45
SH3D19-204ENST00000427414 PRDM15P57071 1507 aaPredicted RBP12.22□□□□□ -0.45
SH3D19-204ENST00000427414 LMTK2Q8IWU2 1503 aa12.22□□□□□ -0.45
SH3D19-204ENST00000427414 DHX29Q7Z478 1369 aaKnown RBP12.22□□□□□ -0.45
SH3D19-204ENST00000427414 RICTORQ6R327 1708 aa12.21□□□□□ -0.45
SH3D19-204ENST00000427414 REREQ9P2R6 1566 aa12.21□□□□□ -0.45
SH3D19-204ENST00000427414 SLC4A1APQ9BWU0 796 aaKnown RBP12.21□□□□□ -0.45
SH3D19-204ENST00000427414 TET3O43151 1660 aa12.21□□□□□ -0.46
SH3D19-204ENST00000427414 NUP155O75694 1391 aa12.2□□□□□ -0.46
SH3D19-204ENST00000427414 PPRC1Q5VV67 1664 aaKnown RBP12.18□□□□□ -0.46
SH3D19-204ENST00000427414 ZC3H13Q5T200 1668 aaKnown RBP12.17□□□□□ -0.46
SH3D19-204ENST00000427414 STAC3Q96MF2 364 aa12.16□□□□□ -0.46
SH3D19-204ENST00000427414 UHRF1BP1Q6BDS2 1440 aa12.16□□□□□ -0.46
SH3D19-204ENST00000427414 SIN3AQ96ST3 1273 aa12.16□□□□□ -0.46
SH3D19-204ENST00000427414 A2MP01023 1474 aa12.16□□□□□ -0.46
SH3D19-204ENST00000427414 KANK1Q14678 1352 aa12.15□□□□□ -0.46
SH3D19-204ENST00000427414 MROH1Q8NDA8 1641 aa12.15□□□□□ -0.46
SH3D19-204ENST00000427414 CYB5RLQ6IPT4 315 aa12.15□□□□□ -0.46
SH3D19-204ENST00000427414 KIF13AQ9H1H9 1805 aa12.14□□□□□ -0.47
SH3D19-204ENST00000427414 PTPRTO14522 1441 aa12.14□□□□□ -0.47
SH3D19-204ENST00000427414 PKD2Q13563 968 aa12.14□□□□□ -0.47
SH3D19-204ENST00000427414 AEBP2Q6ZN18 517 aaPredicted RBP12.14□□□□□ -0.47
SH3D19-204ENST00000427414 TRPM2O94759 1503 aa12.13□□□□□ -0.47
SH3D19-204ENST00000427414 ABCA6Q8N139 1617 aa12.13□□□□□ -0.47
SH3D19-204ENST00000427414 FRMPD1Q5SYB0 1578 aa12.13□□□□□ -0.47
SH3D19-204ENST00000427414 DIP2CQ9Y2E4 1556 aa12.13□□□□□ -0.47
SH3D19-204ENST00000427414 SPHKAPQ2M3C7 1700 aa12.12□□□□□ -0.47
SH3D19-204ENST00000427414 AGLP35573 1532 aa12.12□□□□□ -0.47
SH3D19-204ENST00000427414 E9PCH4 1651 aa12.12□□□□□ -0.47
SH3D19-204ENST00000427414 AFAP1Q8N556 730 aa12.12□□□□□ -0.47
SH3D19-204ENST00000427414 LAMC1P11047 1609 aa12.11□□□□□ -0.47
SH3D19-204ENST00000427414 CEP152O94986 1710 aa12.11□□□□□ -0.47
SH3D19-204ENST00000427414 EFCAB6Q5THR3 1501 aa12.11□□□□□ -0.47
SH3D19-204ENST00000427414 PPP6R1Q9UPN7 881 aa12.1□□□□□ -0.47
SH3D19-204ENST00000427414 CCDC144AA2RUR9 1427 aa12.09□□□□□ -0.47
SH3D19-204ENST00000427414 POLR1AO95602 1720 aaPredicted RBP12.08□□□□□ -0.48
SH3D19-204ENST00000427414 ARHGAP31Q2M1Z3 1444 aa12.08□□□□□ -0.48
SH3D19-204ENST00000427414 PLA2R1Q13018 1463 aa12.08□□□□□ -0.48
SH3D19-204ENST00000427414 RALGAPBQ86X10 1494 aa12.06□□□□□ -0.48
SH3D19-204ENST00000427414 L3MBTL2Q969R5 705 aa12.06□□□□□ -0.48
SH3D19-204ENST00000427414 FAM69CQ0P6D2 419 aa12.05□□□□□ -0.48
SH3D19-204ENST00000427414 KIAA1210Q9ULL0 1709 aa12.05□□□□□ -0.48
SH3D19-204ENST00000427414 CNTLNQ9NXG0 1405 aa12.03□□□□□ -0.48
SH3D19-204ENST00000427414 ABCC3O15438 1527 aa12.03□□□□□ -0.48
SH3D19-204ENST00000427414 CAMSAP1Q5T5Y3 1602 aa12.03□□□□□ -0.48
SH3D19-204ENST00000427414 ARHGEF40Q8TER5 1519 aa12.03□□□□□ -0.48
SH3D19-204ENST00000427414 SPATA31E1Q6ZUB1 1445 aa12.03□□□□□ -0.48
SH3D19-204ENST00000427414 ARID4BQ4LE39 1312 aaPredicted RBP12.03□□□□□ -0.48
SH3D19-204ENST00000427414 SUPT16HQ9Y5B9 1047 aaKnown RBP12.02□□□□□ -0.49
SH3D19-204ENST00000427414 TRPM1Q7Z4N2 1603 aa12.02□□□□□ -0.49
SH3D19-204ENST00000427414 KIF1BO60333 1816 aa12.01□□□□□ -0.49
SH3D19-204ENST00000427414 CLTCL1P53675 1640 aa12□□□□□ -0.49
SH3D19-204ENST00000427414 GPRASP1Q5JY77 1395 aa12□□□□□ -0.49
SH3D19-204ENST00000427414 KIF3BO15066 747 aa12□□□□□ -0.49
SH3D19-204ENST00000427414 PIK3C2BO00750 1634 aa12□□□□□ -0.49
SH3D19-204ENST00000427414 MYOM2P54296 1465 aa12□□□□□ -0.49
SH3D19-204ENST00000427414 FOXD1Q16676 465 aa12□□□□□ -0.49
SH3D19-204ENST00000427414 IFT172Q9UG01 1749 aa12□□□□□ -0.49
SH3D19-204ENST00000427414 PRAG1Q86YV5 1406 aa11.99□□□□□ -0.49
SH3D19-204ENST00000427414 EIF4G2P78344 907 aaKnown RBP eCLIP11.99□□□□□ -0.49
SH3D19-204ENST00000427414 NOS1P29475 1434 aa11.98□□□□□ -0.49
SH3D19-204ENST00000427414 TSPOAP1O95153 1857 aa11.98□□□□□ -0.49
SH3D19-204ENST00000427414 ADGRB3O60242 1522 aa11.97□□□□□ -0.49
SH3D19-204ENST00000427414 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.96□□□□□ -0.54e-8■□□□□ 10.9
SH3D19-204ENST00000427414 RPGRIP1LQ68CZ1 1315 aa11.96□□□□□ -0.5
SH3D19-204ENST00000427414 MADDQ8WXG6 1647 aa11.96□□□□□ -0.5
SH3D19-204ENST00000427414 NRXN1Q9ULB1 1477 aa11.95□□□□□ -0.5
SH3D19-204ENST00000427414 MYT1LQ9UL68 1186 aa11.95□□□□□ -0.5
SH3D19-204ENST00000427414 YEATS2Q9ULM3 1422 aa11.95□□□□□ -0.5
SH3D19-204ENST00000427414 NBPF8Q3BBV2 869 aa11.94□□□□□ -0.5
SH3D19-204ENST00000427414 NPATQ14207 1427 aa11.94□□□□□ -0.5
SH3D19-204ENST00000427414 MROH2AA6NES4 1674 aa11.94□□□□□ -0.5
SH3D19-204ENST00000427414 RAPGEF3O95398 923 aa11.94□□□□□ -0.5
SH3D19-204ENST00000427414 ANP32EQ9BTT0 268 aa11.94□□□□□ -0.5
SH3D19-204ENST00000427414 TSHZ2Q9NRE2 1034 aa11.94□□□□□ -0.5
SH3D19-204ENST00000427414 KDM5AP29375 1690 aaKnown RBP11.94□□□□□ -0.5
SH3D19-204ENST00000427414 PREX1Q8TCU6 1659 aa11.93□□□□□ -0.5
SH3D19-204ENST00000427414 SETBP1Q9Y6X0 1596 aa11.92□□□□□ -0.5
SH3D19-204ENST00000427414 ZFYVE9O95405 1425 aa11.92□□□□□ -0.5
SH3D19-204ENST00000427414 PPLO60437 1756 aa11.91□□□□□ -0.5
SH3D19-204ENST00000427414 ROCK2O75116 1388 aaKnown RBP11.91□□□□□ -0.5
SH3D19-204ENST00000427414 IQGAP1P46940 1657 aa11.9□□□□□ -0.5
SH3D19-204ENST00000427414 SPATA31D1Q6ZQQ2 1576 aa11.9□□□□□ -0.5
SH3D19-204ENST00000427414 SLC52A1Q9NWF4 448 aa11.9□□□□□ -0.5
SH3D19-204ENST00000427414 SIGLEC1Q9BZZ2 1709 aa11.9□□□□□ -0.5
SH3D19-204ENST00000427414 WASHC2CQ9Y4E1 1318 aa11.9□□□□□ -0.5
SH3D19-204ENST00000427414 HSPA5P11021 654 aaKnown RBP11.9□□□□□ -0.5
SH3D19-204ENST00000427414 SYNMO15061 1565 aa11.9□□□□□ -0.51
SH3D19-204ENST00000427414 USP47Q96K76 1375 aa11.89□□□□□ -0.51
SH3D19-204ENST00000427414 COL17A1Q9UMD9 1497 aaPredicted RBP11.89□□□□□ -0.51
SH3D19-204ENST00000427414 DCAF11Q8TEB1 546 aa11.88□□□□□ -0.51
SH3D19-204ENST00000427414 CCDC7Q96M83 1385 aa11.87□□□□□ -0.51
SH3D19-204ENST00000427414 MYO3AQ8NEV4 1616 aa11.87□□□□□ -0.51
SH3D19-204ENST00000427414 ERVK-7P63135 1459 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms