RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 SPATA31E1Q6ZUB1 1445 aa9.78□□□□□ -0.84
LINC01108-201ENST00000427276 UGGT2Q9NYU1 1516 aa9.78□□□□□ -0.84
LINC01108-201ENST00000427276 EIF4G3O43432 1585 aaKnown RBP9.78□□□□□ -0.84
LINC01108-201ENST00000427276 NUP155O75694 1391 aa9.78□□□□□ -0.84
LINC01108-201ENST00000427276 TAOK2Q9UL54 1235 aa9.78□□□□□ -0.84
LINC01108-201ENST00000427276 WDR43Q15061 677 aaKnown RBP eCLIP9.77□□□□□ -0.84
LINC01108-201ENST00000427276 SPRYD3Q8NCJ5 442 aa9.77□□□□□ -0.84
LINC01108-201ENST00000427276 ROCK2O75116 1388 aaKnown RBP9.77□□□□□ -0.85
LINC01108-201ENST00000427276 CANXP27824 592 aaKnown RBP9.77□□□□□ -0.85
LINC01108-201ENST00000427276 ARHGEF11O15085 1522 aa9.76□□□□□ -0.85
LINC01108-201ENST00000427276 TEX14Q8IWB6 1497 aa9.76□□□□□ -0.85
LINC01108-201ENST00000427276 BRD4O60885 1362 aaPredicted RBP9.76□□□□□ -0.85
LINC01108-201ENST00000427276 DAPK1P53355 1430 aa9.76□□□□□ -0.85
LINC01108-201ENST00000427276 PDE3BQ13370 1112 aa9.76□□□□□ -0.85
LINC01108-201ENST00000427276 HECW1Q76N89 1606 aa9.75□□□□□ -0.85
LINC01108-201ENST00000427276 CCDC146Q8IYE0 955 aa9.75□□□□□ -0.85
LINC01108-201ENST00000427276 PANK3Q9H999 370 aa9.75□□□□□ -0.85
LINC01108-201ENST00000427276 NBPF1Q3BBV0 1214 aa9.75□□□□□ -0.85
LINC01108-201ENST00000427276 GAPVD1Q14C86 1478 aa9.75□□□□□ -0.85
LINC01108-201ENST00000427276 TSPY4P0CV99 314 aa9.75□□□□□ -0.85
LINC01108-201ENST00000427276 TSPY10P0CW01 314 aa9.75□□□□□ -0.85
LINC01108-201ENST00000427276 FAM161AQ3B820 660 aa9.75□□□□□ -0.85
LINC01108-201ENST00000427276 WASHC2CQ9Y4E1 1318 aa9.75□□□□□ -0.85
LINC01108-201ENST00000427276 TARBP1Q13395 1621 aaKnown RBP9.75□□□□□ -0.85
LINC01108-201ENST00000427276 CUL7Q14999 1698 aa9.74□□□□□ -0.85
LINC01108-201ENST00000427276 ABCC5O15440 1437 aa9.74□□□□□ -0.85
LINC01108-201ENST00000427276 MIA2Q96PC5 1412 aa9.74□□□□□ -0.85
LINC01108-201ENST00000427276 SAMD9Q5K651 1589 aa9.74□□□□□ -0.85
LINC01108-201ENST00000427276 ADAMTS8Q9UP79 889 aa9.74□□□□□ -0.85
LINC01108-201ENST00000427276 EPRSP07814 1512 aaKnown RBP9.73□□□□□ -0.85
LINC01108-201ENST00000427276 GZF1Q9H116 711 aaPredicted RBP9.73□□□□□ -0.85
LINC01108-201ENST00000427276 GCC2Q8IWJ2 1684 aa9.73□□□□□ -0.85
LINC01108-201ENST00000427276 NEUROD2Q15784 382 aa9.72□□□□□ -0.85
LINC01108-201ENST00000427276 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.72□□□□□ -0.85
LINC01108-201ENST00000427276 CHD1O14646 1710 aa9.72□□□□□ -0.85
LINC01108-201ENST00000427276 BCORL1Q5H9F3 1711 aa9.71□□□□□ -0.85
LINC01108-201ENST00000427276 CENPQQ7L2Z9 268 aaPredicted RBP9.71□□□□□ -0.85
LINC01108-201ENST00000427276 TCOF1Q13428 1488 aaKnown RBP9.71□□□□□ -0.85
LINC01108-201ENST00000427276 POGKQ9P215 609 aa9.71□□□□□ -0.86
LINC01108-201ENST00000427276 KIAA1107Q9UPP5 1409 aa9.7□□□□□ -0.86
LINC01108-201ENST00000427276 LRPPRCP42704 1394 aaKnown RBP9.7□□□□□ -0.86
LINC01108-201ENST00000427276 HNRNPMP52272 730 aaKnown RBP eCLIP9.7□□□□□ -0.86
LINC01108-201ENST00000427276 ARID4BQ4LE39 1312 aaPredicted RBP9.7□□□□□ -0.86
LINC01108-201ENST00000427276 KNSTRNQ9Y448 316 aa9.7□□□□□ -0.86
LINC01108-201ENST00000427276 CYB5RLQ6IPT4 315 aa9.69□□□□□ -0.86
LINC01108-201ENST00000427276 BCAR3O75815 825 aa9.69□□□□□ -0.86
LINC01108-201ENST00000427276 GOLGA2Q08379 1002 aa9.69□□□□□ -0.86
LINC01108-201ENST00000427276 NAP1L5Q96NT1 182 aaPredicted RBP9.69□□□□□ -0.86
LINC01108-201ENST00000427276 ANKRD30AQ9BXX3 1397 aa9.69□□□□□ -0.86
LINC01108-201ENST00000427276 PRG4Q92954 1404 aaPredicted RBP9.68□□□□□ -0.86
LINC01108-201ENST00000427276 C8orf34Q49A92 452 aa9.68□□□□□ -0.86
LINC01108-201ENST00000427276 ROCK1Q13464 1354 aa9.67□□□□□ -0.86
LINC01108-201ENST00000427276 TMF1P82094 1093 aa9.67□□□□□ -0.86
LINC01108-201ENST00000427276 ANKRD50Q9ULJ7 1429 aa9.67□□□□□ -0.86
LINC01108-201ENST00000427276 PZPP20742 1482 aa9.67□□□□□ -0.86
LINC01108-201ENST00000427276 APAF1O14727 1248 aa9.66□□□□□ -0.86
LINC01108-201ENST00000427276 TNNT2P45379 298 aaPredicted RBP9.66□□□□□ -0.86
LINC01108-201ENST00000427276 BECN1Q14457 450 aa9.66□□□□□ -0.86
LINC01108-201ENST00000427276 COG6Q9Y2V7 657 aa9.66□□□□□ -0.86
LINC01108-201ENST00000427276 PLEKHD1A6NEE1 506 aa9.66□□□□□ -0.86
LINC01108-201ENST00000427276 BCL2L13Q9BXK5 485 aa9.65□□□□□ -0.86
LINC01108-201ENST00000427276 UPF2Q9HAU5 1272 aaKnown RBP9.65□□□□□ -0.86
LINC01108-201ENST00000427276 ABCA5Q8WWZ7 1642 aa9.65□□□□□ -0.86
LINC01108-201ENST00000427276 SEC24BO95487 1268 aa9.65□□□□□ -0.87
LINC01108-201ENST00000427276 PANK1Q8TE04 598 aa9.65□□□□□ -0.87
LINC01108-201ENST00000427276 UBE2Q2Q8WVN8 375 aa9.65□□□□□ -0.87
LINC01108-201ENST00000427276 CLUAP1Q96AJ1 413 aa9.65□□□□□ -0.87
LINC01108-201ENST00000427276 PER1O15534 1290 aaPredicted RBP9.64□□□□□ -0.87
LINC01108-201ENST00000427276 DUSP27Q5VZP5 1158 aa9.64□□□□□ -0.87
LINC01108-201ENST00000427276 RSPH6AQ9H0K4 717 aa9.64□□□□□ -0.87
LINC01108-201ENST00000427276 IGHDP01880 384 aa9.63□□□□□ -0.87
LINC01108-201ENST00000427276 KDM2BQ8NHM5 1336 aa9.63□□□□□ -0.87
LINC01108-201ENST00000427276 RRP7AQ9Y3A4 280 aaKnown RBP9.63□□□□□ -0.87
LINC01108-201ENST00000427276 PARD3Q8TEW0 1356 aa9.62□□□□□ -0.87
LINC01108-201ENST00000427276 DISP3Q9P2K9 1392 aa9.62□□□□□ -0.87
LINC01108-201ENST00000427276 FAM43AQ8N2R8 423 aa9.62□□□□□ -0.87
LINC01108-201ENST00000427276 MAGI1Q96QZ7 1491 aaPredicted RBP9.62□□□□□ -0.87
LINC01108-201ENST00000427276 PPP2R1AP30153 589 aa9.62□□□□□ -0.87
LINC01108-201ENST00000427276 CHMP7Q8WUX9 453 aaPredicted RBP9.62□□□□□ -0.87
LINC01108-201ENST00000427276 PLEKHH1Q9ULM0 1364 aa9.61□□□□□ -0.87
LINC01108-201ENST00000427276 TRHP20396 242 aaPredicted RBP9.61□□□□□ -0.87
LINC01108-201ENST00000427276 SPINK5Q9NQ38 1064 aaPredicted RBP9.61□□□□□ -0.87
LINC01108-201ENST00000427276 KDM5CP41229 1560 aa9.61□□□□□ -0.87
LINC01108-201ENST00000427276 CLASP1Q7Z460 1538 aa9.61□□□□□ -0.87
LINC01108-201ENST00000427276 HAP1P54257 671 aaPredicted RBP9.61□□□□□ -0.87
LINC01108-201ENST00000427276 CAMSAP2Q08AD1 1489 aa9.61□□□□□ -0.87
LINC01108-201ENST00000427276 RRAGDQ9NQL2 400 aaPredicted RBP9.61□□□□□ -0.87
LINC01108-201ENST00000427276 POLR1AO95602 1720 aaPredicted RBP9.6□□□□□ -0.87
LINC01108-201ENST00000427276 IQGAP2Q13576 1575 aa9.6□□□□□ -0.87
LINC01108-201ENST00000427276 CCDC144AA2RUR9 1427 aa9.6□□□□□ -0.87
LINC01108-201ENST00000427276 RALGAPBQ86X10 1494 aa9.6□□□□□ -0.87
LINC01108-201ENST00000427276 DNMT1P26358 1616 aaKnown RBP9.6□□□□□ -0.87
LINC01108-201ENST00000427276 MBD5Q9P267 1494 aa9.59□□□□□ -0.87
LINC01108-201ENST00000427276 L1TD1Q5T7N2 865 aaKnown RBP9.59□□□□□ -0.87
LINC01108-201ENST00000427276 PNNQ9H307 717 aaKnown RBP9.59□□□□□ -0.87
LINC01108-201ENST00000427276 SENP3Q9H4L4 574 aaPredicted RBP9.59□□□□□ -0.87
LINC01108-201ENST00000427276 VSIG10Q8N0Z9 540 aa9.59□□□□□ -0.87
LINC01108-201ENST00000427276 SYNJ2O15056 1496 aa9.59□□□□□ -0.87
LINC01108-201ENST00000427276 GOLGA6L3A6NEY3 463 aa9.59□□□□□ -0.87
LINC01108-201ENST00000427276 PDIA4P13667 645 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms