RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 SPDYE16A6NNV3 312 aaPredicted RBP13.85□□□□□ -0.19
C9orf3-205ENST00000427193 BHMG1C9JSJ3 638 aaPredicted RBP13.85□□□□□ -0.19
C9orf3-205ENST00000427193 ARIH1Q9Y4X5 557 aaPredicted RBP13.84□□□□□ -0.19
C9orf3-205ENST00000427193 KCTD12Q96CX2 325 aaKnown RBP13.82□□□□□ -0.2
C9orf3-205ENST00000427193 DDX12PQ92771 950 aa13.81□□□□□ -0.2
C9orf3-205ENST00000427193 NBPF3Q9H094 633 aa13.8□□□□□ -0.2
C9orf3-205ENST00000427193 COL9A1P20849 921 aa13.79□□□□□ -0.2
C9orf3-205ENST00000427193 C6orf132Q5T0Z8 1188 aa13.79□□□□□ -0.2
C9orf3-205ENST00000427193 MRPL50Q8N5N7 158 aaKnown RBP13.79□□□□□ -0.2
C9orf3-205ENST00000427193 RABGEF1Q9UJ41 708 aa13.77□□□□□ -0.21
C9orf3-205ENST00000427193 GOLGA8CPA6NN73 597 aa13.75□□□□□ -0.21
C9orf3-205ENST00000427193 NBR1Q14596 966 aa13.75□□□□□ -0.21
C9orf3-205ENST00000427193 PROX2Q3B8N5 592 aa13.75□□□□□ -0.21
C9orf3-205ENST00000427193 EN1Q05925 392 aaPredicted RBP13.74□□□□□ -0.21
C9orf3-205ENST00000427193 RBM33Q96EV2 1170 aaKnown RBP13.74□□□□□ -0.21
C9orf3-205ENST00000427193 TSHZ2Q9NRE2 1034 aa13.74□□□□□ -0.21
C9orf3-205ENST00000427193 ONECUT3O60422 494 aaPredicted RBP13.73□□□□□ -0.21
C9orf3-205ENST00000427193 WNT2BQ93097 391 aa13.71□□□□□ -0.21
C9orf3-205ENST00000427193 MAP3K7O43318 606 aa13.7□□□□□ -0.22
C9orf3-205ENST00000427193 THSD4Q6ZMP0 1018 aa13.7□□□□□ -0.22
C9orf3-205ENST00000427193 PLA2G2EQ9NZK7 142 aa13.68□□□□□ -0.22
C9orf3-205ENST00000427193 TRIM6-TRIM34B2RNG4 842 aa13.67□□□□□ -0.22
C9orf3-205ENST00000427193 LAPTM4BQ86VI4 370 aa13.67□□□□□ -0.22
C9orf3-205ENST00000427193 KIAA1468Q9P260 1216 aa13.67□□□□□ -0.22
C9orf3-205ENST00000427193 PTPN5P54829 565 aa13.66□□□□□ -0.22
C9orf3-205ENST00000427193 TSR1Q2NL82 804 aaKnown RBP13.66□□□□□ -0.22
C9orf3-205ENST00000427193 GRXCR2A6NFK2 248 aa13.65□□□□□ -0.22
C9orf3-205ENST00000427193 ANKK1Q8NFD2 765 aa13.62□□□□□ -0.23
C9orf3-205ENST00000427193 ARHGEF1Q92888 912 aaKnown RBP13.62□□□□□ -0.23
C9orf3-205ENST00000427193 CERKQ8TCT0 537 aa13.61□□□□□ -0.23
C9orf3-205ENST00000427193 OSBPP22059 807 aa13.59□□□□□ -0.23
C9orf3-205ENST00000427193 PRIM1P49642 420 aaKnown RBP13.59□□□□□ -0.23
C9orf3-205ENST00000427193 ZFRQ96KR1 1074 aaKnown RBP13.58□□□□□ -0.24
C9orf3-205ENST00000427193 FAM98CQ17RN3 349 aaKnown RBP13.57□□□□□ -0.24
C9orf3-205ENST00000427193 PACS2Q86VP3 889 aa13.57□□□□□ -0.24
C9orf3-205ENST00000427193 KCNV2Q8TDN2 545 aa13.57□□□□□ -0.24
C9orf3-205ENST00000427193 SEPT9Q9UHD8 586 aaPredicted RBP13.57□□□□□ -0.24
C9orf3-205ENST00000427193 TSKSQ9UJT2 592 aa13.56□□□□□ -0.24
C9orf3-205ENST00000427193 SOWAHBA6NEL2 793 aa13.55□□□□□ -0.24
C9orf3-205ENST00000427193 PRSS12P56730 875 aa13.55□□□□□ -0.24
C9orf3-205ENST00000427193 PLCB2Q00722 1185 aa13.55□□□□□ -0.24
C9orf3-205ENST00000427193 CDCA7LQ96GN5 454 aa13.55□□□□□ -0.24
C9orf3-205ENST00000427193 BCAMP50895 628 aa13.52□□□□□ -0.25
C9orf3-205ENST00000427193 P3H3Q8IVL6 736 aa13.52□□□□□ -0.25
C9orf3-205ENST00000427193 CDHR5Q9HBB8 845 aa13.51□□□□□ -0.25
C9orf3-205ENST00000427193 IFFO2Q5TF58 517 aa13.5□□□□□ -0.25
C9orf3-205ENST00000427193 RBM27Q9P2N5 1060 aaKnown RBP13.5□□□□□ -0.25
C9orf3-205ENST00000427193 NYAP1Q6ZVC0 841 aa13.49□□□□□ -0.25
C9orf3-205ENST00000427193 LRCH3Q96II8 777 aa13.47□□□□□ -0.25
C9orf3-205ENST00000427193 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.47□□□□□ -0.25
C9orf3-205ENST00000427193 FAM198AQ9UFP1 575 aa13.47□□□□□ -0.25
C9orf3-205ENST00000427193 NBPF26B4DH59 902 aa13.46□□□□□ -0.25
C9orf3-205ENST00000427193 MLLT3P42568 568 aaPredicted RBP13.45□□□□□ -0.26
C9orf3-205ENST00000427193 TATDN2Q93075 761 aa13.44□□□□□ -0.26
C9orf3-205ENST00000427193 WBP1LQ9NX94 342 aa13.43□□□□□ -0.26
C9orf3-205ENST00000427193 TSR3Q9UJK0 312 aaKnown RBP13.43□□□□□ -0.26
C9orf3-205ENST00000427193 SMAPO00193 183 aa13.42□□□□□ -0.26
C9orf3-205ENST00000427193 NPDC1Q9NQX5 325 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-205ENST00000427193 PNMA3Q9UL41 463 aa13.42□□□□□ -0.26
C9orf3-205ENST00000427193 HPS5Q9UPZ3 1129 aa13.41□□□□□ -0.26
C9orf3-205ENST00000427193 TTC13Q8NBP0 860 aa13.4□□□□□ -0.26
C9orf3-205ENST00000427193 ITGBL1O95965 494 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-205ENST00000427193 C3orf80F5H4A9 247 aa13.38□□□□□ -0.27
C9orf3-205ENST00000427193 PADI6Q6TGC4 694 aa13.38□□□□□ -0.27
C9orf3-205ENST00000427193 NUDT18Q6ZVK8 323 aa13.38□□□□□ -0.27
C9orf3-205ENST00000427193 SAMD7Q7Z3H4 446 aa13.37□□□□□ -0.27
C9orf3-205ENST00000427193 A0A0G2JS52 829 aa13.34□□□□□ -0.27
C9orf3-205ENST00000427193 PPP4CP60510 307 aa13.34□□□□□ -0.27
C9orf3-205ENST00000427193 HDGFP51858 240 aaKnown RBP13.33□□□□□ -0.28
C9orf3-205ENST00000427193 SEMA3EO15041 775 aa13.32□□□□□ -0.28
C9orf3-205ENST00000427193 PTGDRQ13258 359 aa13.32□□□□□ -0.28
C9orf3-205ENST00000427193 RGS20O76081 388 aa13.31□□□□□ -0.28
C9orf3-205ENST00000427193 HAP1P54257 671 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-205ENST00000427193 KCNC4Q03721 635 aa13.28□□□□□ -0.28
C9orf3-205ENST00000427193 NUTM2FA1L443 756 aa13.27□□□□□ -0.29
C9orf3-205ENST00000427193 EYA1Q99502 592 aa13.26□□□□□ -0.29
C9orf3-205ENST00000427193 NECTIN2Q92692 538 aa13.25□□□□□ -0.29
C9orf3-205ENST00000427193 TESPA1A2RU30 521 aaPredicted RBP13.24□□□□□ -0.29
C9orf3-205ENST00000427193 RNF40O75150 1001 aa13.24□□□□□ -0.29
C9orf3-205ENST00000427193 FCHSD2O94868 740 aa13.23□□□□□ -0.29
C9orf3-205ENST00000427193 SWT1Q5T5J6 900 aaKnown RBP13.23□□□□□ -0.29
C9orf3-205ENST00000427193 SLF2Q8IX21 1173 aa13.23□□□□□ -0.29
C9orf3-205ENST00000427193 SLC4A3P48751 1232 aa13.22□□□□□ -0.29
C9orf3-205ENST00000427193 SMYD5Q6GMV2 418 aa13.22□□□□□ -0.29
C9orf3-205ENST00000427193 RBM46Q8TBY0 533 aaKnown RBP13.2□□□□□ -0.3
C9orf3-205ENST00000427193 ADGRG1Q9Y653 693 aa13.19□□□□□ -0.3
C9orf3-205ENST00000427193 DNAJB2P25686 324 aa13.18□□□□□ -0.3
C9orf3-205ENST00000427193 TJAP1Q5JTD0 557 aa13.18□□□□□ -0.3
C9orf3-205ENST00000427193 KDM2AQ9Y2K7 1162 aa13.18□□□□□ -0.3
C9orf3-205ENST00000427193 APLP1P51693 650 aa13.16□□□□□ -0.3
C9orf3-205ENST00000427193 MTRQ99707 1265 aa13.15□□□□□ -0.3
C9orf3-205ENST00000427193 IL21Q9HBE4 155 aa13.15□□□□□ -0.3
C9orf3-205ENST00000427193 HIC1Q14526 733 aa13.14□□□□□ -0.31
C9orf3-205ENST00000427193 RBM26Q5T8P6 1007 aaKnown RBP13.14□□□□□ -0.31
C9orf3-205ENST00000427193 TMEM134Q9H6X4 195 aa13.13□□□□□ -0.31
C9orf3-205ENST00000427193 VSIG10Q8N0Z9 540 aa13.12□□□□□ -0.31
C9orf3-205ENST00000427193 PRR14Q9BWN1 585 aa13.12□□□□□ -0.31
C9orf3-205ENST00000427193 RCCD1A6NED2 376 aa13.11□□□□□ -0.31
C9orf3-205ENST00000427193 FAM161AQ3B820 660 aa13.1□□□□□ -0.31
C9orf3-205ENST00000427193 OATP04181 439 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms