RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 RGS3P49796 1198 aa17.77■□□□□ 0.43
RPL28-202ENST00000426763 PANK3Q9H999 370 aa17.77■□□□□ 0.43
RPL28-202ENST00000426763 UNC13AQ9UPW8 1703 aa17.76■□□□□ 0.43
RPL28-202ENST00000426763 GOLGA2Q08379 1002 aa17.75■□□□□ 0.43
RPL28-202ENST00000426763 CGNL1Q0VF96 1302 aa17.75■□□□□ 0.43
RPL28-202ENST00000426763 COG3Q96JB2 828 aa17.75■□□□□ 0.43
RPL28-202ENST00000426763 MIA2Q96PC5 1412 aa17.75■□□□□ 0.43
RPL28-202ENST00000426763 MAGI1Q96QZ7 1491 aaPredicted RBP17.75■□□□□ 0.43
RPL28-202ENST00000426763 LMOD3Q0VAK6 560 aa17.75■□□□□ 0.43
RPL28-202ENST00000426763 IQGAP2Q13576 1575 aa17.74■□□□□ 0.43
RPL28-202ENST00000426763 CUL7Q14999 1698 aa17.74■□□□□ 0.43
RPL28-202ENST00000426763 LTV1Q96GA3 475 aaPredicted RBP17.73■□□□□ 0.43
RPL28-202ENST00000426763 STK31Q9BXU1 1019 aa17.71■□□□□ 0.43
RPL28-202ENST00000426763 C9orf84Q5VXU9 1444 aa17.71■□□□□ 0.43
RPL28-202ENST00000426763 MYBBP1AQ9BQG0 1328 aaKnown RBP17.71■□□□□ 0.43
RPL28-202ENST00000426763 NCLP19338 710 aaKnown RBP17.7■□□□□ 0.42
RPL28-202ENST00000426763 URB2Q14146 1524 aaKnown RBP17.7■□□□□ 0.42
RPL28-202ENST00000426763 GRIN2AQ12879 1464 aa17.69■□□□□ 0.42
RPL28-202ENST00000426763 ZNF330Q9Y3S2 320 aaPredicted RBP17.69■□□□□ 0.42
RPL28-202ENST00000426763 CENPJQ9HC77 1338 aaPredicted RBP17.69■□□□□ 0.42
RPL28-202ENST00000426763 SCAPERQ9BY12 1400 aa17.69■□□□□ 0.42
RPL28-202ENST00000426763 RCAN3Q9UKA8 241 aa17.69■□□□□ 0.42
RPL28-202ENST00000426763 RRBP1Q9P2E9 1410 aaKnown RBP17.69■□□□□ 0.42
RPL28-202ENST00000426763 CCDC146Q8IYE0 955 aa17.68■□□□□ 0.42
RPL28-202ENST00000426763 AEBP2Q6ZN18 517 aaPredicted RBP17.67■□□□□ 0.42
RPL28-202ENST00000426763 GOLGA6L22H0YM25 854 aa17.67■□□□□ 0.42
RPL28-202ENST00000426763 TIAM1Q13009 1591 aa17.67■□□□□ 0.42
RPL28-202ENST00000426763 KCNJ4P48050 445 aa17.66■□□□□ 0.42
RPL28-202ENST00000426763 B4GALNT3Q6L9W6 998 aa17.66■□□□□ 0.42
RPL28-202ENST00000426763 EPRSP07814 1512 aaKnown RBP17.65■□□□□ 0.42
RPL28-202ENST00000426763 NBR1Q14596 966 aa17.65■□□□□ 0.42
RPL28-202ENST00000426763 PSME1Q06323 249 aa17.64■□□□□ 0.41
RPL28-202ENST00000426763 PDE3BQ13370 1112 aa17.64■□□□□ 0.41
RPL28-202ENST00000426763 ITPRIPQ8IWB1 547 aa17.64■□□□□ 0.41
RPL28-202ENST00000426763 SUPT6HQ7KZ85 1726 aaKnown RBP17.63■□□□□ 0.41
RPL28-202ENST00000426763 SMC4Q9NTJ3 1288 aa17.63■□□□□ 0.41
RPL28-202ENST00000426763 HDAC5Q9UQL6 1122 aa17.62■□□□□ 0.41
RPL28-202ENST00000426763 HFM1A2PYH4 1435 aa17.62■□□□□ 0.41
RPL28-202ENST00000426763 FGD1P98174 961 aa17.62■□□□□ 0.41
RPL28-202ENST00000426763 CDK13Q14004 1512 aaKnown RBP17.62■□□□□ 0.41
RPL28-202ENST00000426763 RAPGEF3O95398 923 aa17.62■□□□□ 0.41
RPL28-202ENST00000426763 EVA1CP58658 441 aa17.62■□□□□ 0.41
RPL28-202ENST00000426763 CFAP44Q96MT7 982 aa17.62■□□□□ 0.41
RPL28-202ENST00000426763 ATF3P18847 181 aa17.61■□□□□ 0.41
RPL28-202ENST00000426763 TXNDC2Q86VQ3 553 aa17.59■□□□□ 0.41
RPL28-202ENST00000426763 POGZQ7Z3K3 1410 aa17.59■□□□□ 0.41
RPL28-202ENST00000426763 C1orf141Q5JVX7 400 aa17.59■□□□□ 0.41
RPL28-202ENST00000426763 RWDD1Q9H446 243 aaPredicted RBP17.59■□□□□ 0.41
RPL28-202ENST00000426763 DAPK1P53355 1430 aa17.59■□□□□ 0.41
RPL28-202ENST00000426763 ZNF608Q9ULD9 1512 aaPredicted RBP17.58■□□□□ 0.4
RPL28-202ENST00000426763 PRKRIP1Q9H875 184 aaPredicted RBP17.58■□□□□ 0.4
RPL28-202ENST00000426763 THEMISQ8N1K5 641 aaPredicted RBP17.57■□□□□ 0.4
RPL28-202ENST00000426763 ANP32EQ9BTT0 268 aa17.57■□□□□ 0.4
RPL28-202ENST00000426763 TMEM132EQ6IEE7 984 aa17.57■□□□□ 0.4
RPL28-202ENST00000426763 ERICH6BQ5W0A0 696 aa17.57■□□□□ 0.4
RPL28-202ENST00000426763 SLC52A1Q9NWF4 448 aa17.57■□□□□ 0.4
RPL28-202ENST00000426763 APBB1O00213 710 aa17.56■□□□□ 0.4
RPL28-202ENST00000426763 MCCP23508 829 aa17.56■□□□□ 0.4
RPL28-202ENST00000426763 KIAA1107Q9UPP5 1409 aa17.56■□□□□ 0.4
RPL28-202ENST00000426763 PLB1Q6P1J6 1458 aa17.55■□□□□ 0.4
RPL28-202ENST00000426763 CD109Q6YHK3 1445 aa17.55■□□□□ 0.4
RPL28-202ENST00000426763 RRP7AQ9Y3A4 280 aaKnown RBP17.55■□□□□ 0.4
RPL28-202ENST00000426763 BIVM-ERCC5R4GMW8 1640 aa17.55■□□□□ 0.4
RPL28-202ENST00000426763 DIAPH1O60610 1272 aaKnown RBP17.55■□□□□ 0.4
RPL28-202ENST00000426763 TMX4Q9H1E5 349 aaPredicted RBP17.54■□□□□ 0.4
RPL28-202ENST00000426763 CFAP70Q5T0N1 1121 aa17.54■□□□□ 0.4
RPL28-202ENST00000426763 ARHGEF11O15085 1522 aa17.54■□□□□ 0.4
RPL28-202ENST00000426763 ZRSR1Q15695 479 aaKnown RBP17.53■□□□□ 0.4
RPL28-202ENST00000426763 HMMRO75330 724 aa17.53■□□□□ 0.4
RPL28-202ENST00000426763 PCF11O94913 1555 aaKnown RBP17.53■□□□□ 0.4
RPL28-202ENST00000426763 SLC4A10Q6U841 1118 aa17.53■□□□□ 0.4
RPL28-202ENST00000426763 HSP90AB1P08238 724 aaKnown RBP17.52■□□□□ 0.4
RPL28-202ENST00000426763 PMFBP1Q8TBY8 1022 aa17.52■□□□□ 0.4
RPL28-202ENST00000426763 TEFQ10587 303 aa17.52■□□□□ 0.4
RPL28-202ENST00000426763 NAP1L2Q9ULW6 460 aaPredicted RBP17.52■□□□□ 0.4
RPL28-202ENST00000426763 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.51■□□□□ 0.39
RPL28-202ENST00000426763 TAF7LQ5H9L4 462 aa17.51■□□□□ 0.39
RPL28-202ENST00000426763 CABP2Q9NPB3 220 aa17.51■□□□□ 0.39
RPL28-202ENST00000426763 CHMP3Q9Y3E7 222 aa17.51■□□□□ 0.39
RPL28-202ENST00000426763 CCDC141Q6ZP82 1450 aa17.51■□□□□ 0.39
RPL28-202ENST00000426763 CCDC7Q96M83 1385 aa17.51■□□□□ 0.39
RPL28-202ENST00000426763 KIF14Q15058 1648 aa17.5■□□□□ 0.39
RPL28-202ENST00000426763 KIF7Q2M1P5 1343 aa17.49■□□□□ 0.39
RPL28-202ENST00000426763 CDK11BP21127 795 aaKnown RBP17.49■□□□□ 0.39
RPL28-202ENST00000426763 CLUAP1Q96AJ1 413 aa17.49■□□□□ 0.39
RPL28-202ENST00000426763 E9PSI1 815 aa17.48■□□□□ 0.39
RPL28-202ENST00000426763 KIAA1211Q6ZU35 1233 aa17.48■□□□□ 0.39
RPL28-202ENST00000426763 PROSER2Q86WR7 435 aaPredicted RBP17.48■□□□□ 0.39
RPL28-202ENST00000426763 GORABQ5T7V8 394 aa17.48■□□□□ 0.39
RPL28-202ENST00000426763 ROCK1Q13464 1354 aa17.47■□□□□ 0.39
RPL28-202ENST00000426763 MEX3CQ5U5Q3 659 aaKnown RBP17.47■□□□□ 0.39
RPL28-202ENST00000426763 NGEFQ8N5V2 710 aa17.47■□□□□ 0.39
RPL28-202ENST00000426763 TTC5Q8N0Z6 440 aa17.46■□□□□ 0.39
RPL28-202ENST00000426763 GPATCH3Q96I76 525 aa17.46■□□□□ 0.39
RPL28-202ENST00000426763 TAOK2Q9UL54 1235 aa17.46■□□□□ 0.39
RPL28-202ENST00000426763 HSCBQ8IWL3 235 aa17.46■□□□□ 0.39
RPL28-202ENST00000426763 RPGRIP1LQ68CZ1 1315 aa17.46■□□□□ 0.39
RPL28-202ENST00000426763 GPRASP1Q5JY77 1395 aa17.46■□□□□ 0.39
RPL28-202ENST00000426763 ADGRL1O94910 1474 aa17.45■□□□□ 0.38
RPL28-202ENST00000426763 GTF2E1P29083 439 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms