RNA–Protein interactions for RNA: ENST00000425466.1

RPS3AP44-201, Transcript of ribosomal protein S3a pseudogene 44, humanhuman

BASIC

Gene RPS3AP44, Length 790 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP44-201ENST00000425466 NBPF3Q9H094 633 aa12.1□□□□□ -0.47
RPS3AP44-201ENST00000425466 RABGEF1Q9UJ41 708 aa12.1□□□□□ -0.47
RPS3AP44-201ENST00000425466 C6orf132Q5T0Z8 1188 aa12.08□□□□□ -0.48
RPS3AP44-201ENST00000425466 DDX12PQ92771 950 aa12.06□□□□□ -0.48
RPS3AP44-201ENST00000425466 EPAS1Q99814 870 aa12.06□□□□□ -0.48
RPS3AP44-201ENST00000425466 KIAA1468Q9P260 1216 aa12.06□□□□□ -0.48
RPS3AP44-201ENST00000425466 SPRYD3Q8NCJ5 442 aa12.05□□□□□ -0.48
RPS3AP44-201ENST00000425466 RBM33Q96EV2 1170 aaKnown RBP12.04□□□□□ -0.48
RPS3AP44-201ENST00000425466 IFFO2Q5TF58 517 aa12.01□□□□□ -0.49
RPS3AP44-201ENST00000425466 ONECUT3O60422 494 aaPredicted RBP12□□□□□ -0.49
RPS3AP44-201ENST00000425466 RTN4Q9NQC3 1192 aaKnown RBP12□□□□□ -0.49
RPS3AP44-201ENST00000425466 BCAMP50895 628 aa11.99□□□□□ -0.49
RPS3AP44-201ENST00000425466 LAPTM4BQ86VI4 370 aa11.99□□□□□ -0.49
RPS3AP44-201ENST00000425466 ANKK1Q8NFD2 765 aa11.99□□□□□ -0.49
RPS3AP44-201ENST00000425466 TRIM6-TRIM34B2RNG4 842 aa11.98□□□□□ -0.49
RPS3AP44-201ENST00000425466 PDIA6Q15084 440 aa11.98□□□□□ -0.49
RPS3AP44-201ENST00000425466 ZFRQ96KR1 1074 aaKnown RBP11.98□□□□□ -0.49
RPS3AP44-201ENST00000425466 SEPT9Q9UHD8 586 aaPredicted RBP11.98□□□□□ -0.49
RPS3AP44-201ENST00000425466 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.97□□□□□ -0.49
RPS3AP44-201ENST00000425466 SOWAHBA6NEL2 793 aa11.96□□□□□ -0.49
RPS3AP44-201ENST00000425466 TSR1Q2NL82 804 aaKnown RBP11.96□□□□□ -0.49
RPS3AP44-201ENST00000425466 AMER1Q5JTC6 1135 aaPredicted RBP11.96□□□□□ -0.49
RPS3AP44-201ENST00000425466 EN1Q05925 392 aaPredicted RBP11.95□□□□□ -0.5
RPS3AP44-201ENST00000425466 NBR1Q14596 966 aa11.95□□□□□ -0.5
RPS3AP44-201ENST00000425466 PAXIP1Q6ZW49 1069 aaPredicted RBP11.95□□□□□ -0.5
RPS3AP44-201ENST00000425466 PRIM1P49642 420 aaKnown RBP11.94□□□□□ -0.5
RPS3AP44-201ENST00000425466 CFAP44Q96MT7 982 aa11.94□□□□□ -0.5
RPS3AP44-201ENST00000425466 E2F4Q16254 413 aa11.93□□□□□ -0.5
RPS3AP44-201ENST00000425466 A0A0G2JS52 829 aa11.92□□□□□ -0.5
RPS3AP44-201ENST00000425466 SPDYE16A6NNV3 312 aaPredicted RBP11.92□□□□□ -0.5
RPS3AP44-201ENST00000425466 WBP1LQ9NX94 342 aa11.92□□□□□ -0.5
RPS3AP44-201ENST00000425466 TSKSQ9UJT2 592 aa11.92□□□□□ -0.5
RPS3AP44-201ENST00000425466 MAP3K7O43318 606 aa11.91□□□□□ -0.5
RPS3AP44-201ENST00000425466 ARIH1Q9Y4X5 557 aaPredicted RBP11.9□□□□□ -0.5
RPS3AP44-201ENST00000425466 FAM98CQ17RN3 349 aaKnown RBP11.89□□□□□ -0.51
RPS3AP44-201ENST00000425466 ITGBL1O95965 494 aaPredicted RBP11.88□□□□□ -0.51
RPS3AP44-201ENST00000425466 RGS20O76081 388 aa11.87□□□□□ -0.51
RPS3AP44-201ENST00000425466 FAM198AQ9UFP1 575 aa11.87□□□□□ -0.51
RPS3AP44-201ENST00000425466 GRXCR2A6NFK2 248 aa11.86□□□□□ -0.51
RPS3AP44-201ENST00000425466 C3orf80F5H4A9 247 aa11.85□□□□□ -0.51
RPS3AP44-201ENST00000425466 WDR70Q9NW82 654 aa11.85□□□□□ -0.51
RPS3AP44-201ENST00000425466 PACS2Q86VP3 889 aa11.84□□□□□ -0.51
RPS3AP44-201ENST00000425466 CDCA7LQ96GN5 454 aa11.84□□□□□ -0.51
RPS3AP44-201ENST00000425466 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.84□□□□□ -0.51
RPS3AP44-201ENST00000425466 SMAPO00193 183 aa11.83□□□□□ -0.52
RPS3AP44-201ENST00000425466 NYAP1Q6ZVC0 841 aa11.83□□□□□ -0.52
RPS3AP44-201ENST00000425466 OSBPP22059 807 aa11.82□□□□□ -0.52
RPS3AP44-201ENST00000425466 PRSS12P56730 875 aa11.82□□□□□ -0.52
RPS3AP44-201ENST00000425466 LRCH3Q96II8 777 aa11.82□□□□□ -0.52
RPS3AP44-201ENST00000425466 TSR3Q9UJK0 312 aaKnown RBP11.82□□□□□ -0.52
RPS3AP44-201ENST00000425466 HPS5Q9UPZ3 1129 aa11.82□□□□□ -0.52
RPS3AP44-201ENST00000425466 CDHR5Q9HBB8 845 aa11.8□□□□□ -0.52
RPS3AP44-201ENST00000425466 KCNC4Q03721 635 aa11.77□□□□□ -0.53
RPS3AP44-201ENST00000425466 CERKQ8TCT0 537 aa11.77□□□□□ -0.53
RPS3AP44-201ENST00000425466 SAMD7Q7Z3H4 446 aa11.76□□□□□ -0.53
RPS3AP44-201ENST00000425466 TATDN2Q93075 761 aa11.76□□□□□ -0.53
RPS3AP44-201ENST00000425466 IRX2Q9BZI1 471 aaPredicted RBP11.75□□□□□ -0.53
RPS3AP44-201ENST00000425466 PPP4CP60510 307 aa11.74□□□□□ -0.53
RPS3AP44-201ENST00000425466 PNMA3Q9UL41 463 aa11.74□□□□□ -0.53
RPS3AP44-201ENST00000425466 NPDC1Q9NQX5 325 aaPredicted RBP11.73□□□□□ -0.53
RPS3AP44-201ENST00000425466 NUDT18Q6ZVK8 323 aa11.71□□□□□ -0.53
RPS3AP44-201ENST00000425466 TSHZ2Q9NRE2 1034 aa11.71□□□□□ -0.53
RPS3AP44-201ENST00000425466 NBPF26B4DH59 902 aa11.69□□□□□ -0.54
RPS3AP44-201ENST00000425466 TJAP1Q5JTD0 557 aa11.69□□□□□ -0.54
RPS3AP44-201ENST00000425466 TTC13Q8NBP0 860 aa11.69□□□□□ -0.54
RPS3AP44-201ENST00000425466 RBM27Q9P2N5 1060 aaKnown RBP11.67□□□□□ -0.54
RPS3AP44-201ENST00000425466 MLLT3P42568 568 aaPredicted RBP11.65□□□□□ -0.54
RPS3AP44-201ENST00000425466 PADI6Q6TGC4 694 aa11.65□□□□□ -0.54
RPS3AP44-201ENST00000425466 ARHGEF1Q92888 912 aaKnown RBP11.62□□□□□ -0.55
RPS3AP44-201ENST00000425466 MTRQ99707 1265 aa11.62□□□□□ -0.55
RPS3AP44-201ENST00000425466 APLP1P51693 650 aa11.61□□□□□ -0.55
RPS3AP44-201ENST00000425466 KCNV2Q8TDN2 545 aa11.61□□□□□ -0.55
RPS3AP44-201ENST00000425466 ZNF516Q92618 1163 aa11.61□□□□□ -0.55
RPS3AP44-201ENST00000425466 RNF40O75150 1001 aa11.59□□□□□ -0.55
RPS3AP44-201ENST00000425466 SWT1Q5T5J6 900 aaKnown RBP11.59□□□□□ -0.55
RPS3AP44-201ENST00000425466 EYA1Q99502 592 aa11.59□□□□□ -0.55
RPS3AP44-201ENST00000425466 HDGFP51858 240 aaKnown RBP11.58□□□□□ -0.56
RPS3AP44-201ENST00000425466 IL21Q9HBE4 155 aa11.58□□□□□ -0.56
RPS3AP44-201ENST00000425466 PPP1R18Q6NYC8 613 aa11.55□□□□□ -0.56
RPS3AP44-201ENST00000425466 NKX2-3Q8TAU0 364 aa11.55□□□□□ -0.56
RPS3AP44-201ENST00000425466 PTGDRQ13258 359 aa11.53□□□□□ -0.56
RPS3AP44-201ENST00000425466 Q6ZNB5 142 aa11.51□□□□□ -0.57
RPS3AP44-201ENST00000425466 SLF2Q8IX21 1173 aa11.51□□□□□ -0.57
RPS3AP44-201ENST00000425466 COPS2P61201 443 aa11.5□□□□□ -0.57
RPS3AP44-201ENST00000425466 PRKD2Q9BZL6 878 aa11.5□□□□□ -0.57
RPS3AP44-201ENST00000425466 FAM161AQ3B820 660 aa11.48□□□□□ -0.57
RPS3AP44-201ENST00000425466 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.48□□□□□ -0.57
RPS3AP44-201ENST00000425466 LCE2BO14633 110 aa11.47□□□□□ -0.57
RPS3AP44-201ENST00000425466 GFRA3O60609 400 aa11.46□□□□□ -0.57
RPS3AP44-201ENST00000425466 ADGRG1Q9Y653 693 aa11.46□□□□□ -0.57
RPS3AP44-201ENST00000425466 SEMA3EO15041 775 aa11.45□□□□□ -0.58
RPS3AP44-201ENST00000425466 NECTIN2Q92692 538 aa11.45□□□□□ -0.58
RPS3AP44-201ENST00000425466 NUTM2FA1L443 756 aa11.44□□□□□ -0.58
RPS3AP44-201ENST00000425466 ZPR1O75312 459 aa11.43□□□□□ -0.58
RPS3AP44-201ENST00000425466 DNAJB2P25686 324 aa11.42□□□□□ -0.58
RPS3AP44-201ENST00000425466 LAPTM4AQ15012 233 aa11.42□□□□□ -0.58
RPS3AP44-201ENST00000425466 TMEM134Q9H6X4 195 aa11.42□□□□□ -0.58
RPS3AP44-201ENST00000425466 V9GY48 417 aaPredicted RBP11.42□□□□□ -0.58
RPS3AP44-201ENST00000425466 RCCD1A6NED2 376 aa11.41□□□□□ -0.58
RPS3AP44-201ENST00000425466 RBM46Q8TBY0 533 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 431.2 ms