RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 EPAS1Q99814 870 aa7.42□□□□□ -1.22
SF3B1-205ENST00000424674 DDX12PQ92771 950 aa7.41□□□□□ -1.22
SF3B1-205ENST00000424674 ARIH1Q9Y4X5 557 aaPredicted RBP7.41□□□□□ -1.22
SF3B1-205ENST00000424674 TSHZ2Q9NRE2 1034 aa7.4□□□□□ -1.22
SF3B1-205ENST00000424674 NBR1Q14596 966 aa7.39□□□□□ -1.23
SF3B1-205ENST00000424674 COL9A1P20849 921 aa7.38□□□□□ -1.23
SF3B1-205ENST00000424674 KCTD12Q96CX2 325 aaKnown RBP7.38□□□□□ -1.23
SF3B1-205ENST00000424674 NBPF3Q9H094 633 aa7.38□□□□□ -1.23
SF3B1-205ENST00000424674 BHMG1C9JSJ3 638 aaPredicted RBP7.37□□□□□ -1.23
SF3B1-205ENST00000424674 C6orf132Q5T0Z8 1188 aa7.37□□□□□ -1.23
SF3B1-205ENST00000424674 RBM33Q96EV2 1170 aaKnown RBP7.37□□□□□ -1.23
SF3B1-205ENST00000424674 HCSTQ9UBK5 93 aa7.37□□□□□ -1.23
SF3B1-205ENST00000424674 EN1Q05925 392 aaPredicted RBP7.36□□□□□ -1.23
SF3B1-205ENST00000424674 PROX2Q3B8N5 592 aa7.36□□□□□ -1.23
SF3B1-205ENST00000424674 MRPL50Q8N5N7 158 aaKnown RBP7.35□□□□□ -1.23
SF3B1-205ENST00000424674 RABGEF1Q9UJ41 708 aa7.35□□□□□ -1.23
SF3B1-205ENST00000424674 GOLGA8CPA6NN73 597 aa7.34□□□□□ -1.23
SF3B1-205ENST00000424674 MAP3K7O43318 606 aa7.34□□□□□ -1.23
SF3B1-205ENST00000424674 GRXCR2A6NFK2 248 aa7.33□□□□□ -1.24
SF3B1-205ENST00000424674 PLCB2Q00722 1185 aa7.33□□□□□ -1.24
SF3B1-205ENST00000424674 TSR1Q2NL82 804 aaKnown RBP7.32□□□□□ -1.24
SF3B1-205ENST00000424674 KCNV2Q8TDN2 545 aa7.32□□□□□ -1.24
SF3B1-205ENST00000424674 TRIM6-TRIM34B2RNG4 842 aa7.31□□□□□ -1.24
SF3B1-205ENST00000424674 THSD4Q6ZMP0 1018 aa7.31□□□□□ -1.24
SF3B1-205ENST00000424674 WNT2BQ93097 391 aa7.31□□□□□ -1.24
SF3B1-205ENST00000424674 ONECUT3O60422 494 aaPredicted RBP7.3□□□□□ -1.24
SF3B1-205ENST00000424674 PTPN5P54829 565 aa7.3□□□□□ -1.24
SF3B1-205ENST00000424674 ARHGEF1Q92888 912 aaKnown RBP7.3□□□□□ -1.24
SF3B1-205ENST00000424674 PRIM1P49642 420 aaKnown RBP7.29□□□□□ -1.24
SF3B1-205ENST00000424674 LAPTM4BQ86VI4 370 aa7.29□□□□□ -1.24
SF3B1-205ENST00000424674 P3H3Q8IVL6 736 aa7.29□□□□□ -1.24
SF3B1-205ENST00000424674 KIAA1468Q9P260 1216 aa7.29□□□□□ -1.24
SF3B1-205ENST00000424674 ANKK1Q8NFD2 765 aa7.28□□□□□ -1.24
SF3B1-205ENST00000424674 SEPT9Q9UHD8 586 aaPredicted RBP7.28□□□□□ -1.24
SF3B1-205ENST00000424674 OSBPP22059 807 aa7.27□□□□□ -1.25
SF3B1-205ENST00000424674 CERKQ8TCT0 537 aa7.27□□□□□ -1.25
SF3B1-205ENST00000424674 PLA2G2EQ9NZK7 142 aa7.27□□□□□ -1.25
SF3B1-205ENST00000424674 HAP1P54257 671 aaPredicted RBP7.26□□□□□ -1.25
SF3B1-205ENST00000424674 CDHR5Q9HBB8 845 aa7.26□□□□□ -1.25
SF3B1-205ENST00000424674 TSKSQ9UJT2 592 aa7.26□□□□□ -1.25
SF3B1-205ENST00000424674 FAM98CQ17RN3 349 aaKnown RBP7.25□□□□□ -1.25
SF3B1-205ENST00000424674 CDCA7LQ96GN5 454 aa7.25□□□□□ -1.25
SF3B1-205ENST00000424674 ZFRQ96KR1 1074 aaKnown RBP7.25□□□□□ -1.25
SF3B1-205ENST00000424674 PRSS12P56730 875 aa7.24□□□□□ -1.25
SF3B1-205ENST00000424674 PACS2Q86VP3 889 aa7.24□□□□□ -1.25
SF3B1-205ENST00000424674 SOWAHBA6NEL2 793 aa7.23□□□□□ -1.25
SF3B1-205ENST00000424674 MLLT3P42568 568 aaPredicted RBP7.23□□□□□ -1.25
SF3B1-205ENST00000424674 BCAMP50895 628 aa7.23□□□□□ -1.25
SF3B1-205ENST00000424674 RBM27Q9P2N5 1060 aaKnown RBP7.23□□□□□ -1.25
SF3B1-205ENST00000424674 NBPF26B4DH59 902 aa7.22□□□□□ -1.25
SF3B1-205ENST00000424674 FAM198AQ9UFP1 575 aa7.21□□□□□ -1.26
SF3B1-205ENST00000424674 LRCH3Q96II8 777 aa7.2□□□□□ -1.26
SF3B1-205ENST00000424674 SMAPO00193 183 aa7.19□□□□□ -1.26
SF3B1-205ENST00000424674 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.19□□□□□ -1.26
SF3B1-205ENST00000424674 PNMA3Q9UL41 463 aa7.19□□□□□ -1.26
SF3B1-205ENST00000424674 PADI6Q6TGC4 694 aa7.18□□□□□ -1.26
SF3B1-205ENST00000424674 TATDN2Q93075 761 aa7.18□□□□□ -1.26
SF3B1-205ENST00000424674 NPDC1Q9NQX5 325 aaPredicted RBP7.18□□□□□ -1.26
SF3B1-205ENST00000424674 DAXXQ9UER7 740 aaPredicted RBP7.18□□□□□ -1.26
SF3B1-205ENST00000424674 C3orf80F5H4A9 247 aa7.17□□□□□ -1.26
SF3B1-205ENST00000424674 NYAP1Q6ZVC0 841 aa7.17□□□□□ -1.26
SF3B1-205ENST00000424674 HPS5Q9UPZ3 1129 aa7.17□□□□□ -1.26
SF3B1-205ENST00000424674 SEMA3EO15041 775 aa7.16□□□□□ -1.26
SF3B1-205ENST00000424674 IFFO2Q5TF58 517 aa7.16□□□□□ -1.26
SF3B1-205ENST00000424674 NUDT18Q6ZVK8 323 aa7.16□□□□□ -1.26
SF3B1-205ENST00000424674 TTC13Q8NBP0 860 aa7.16□□□□□ -1.26
SF3B1-205ENST00000424674 WBP1LQ9NX94 342 aa7.16□□□□□ -1.26
SF3B1-205ENST00000424674 TSR3Q9UJK0 312 aaKnown RBP7.16□□□□□ -1.26
SF3B1-205ENST00000424674 PTGDRQ13258 359 aa7.15□□□□□ -1.26
SF3B1-205ENST00000424674 SAMD7Q7Z3H4 446 aa7.15□□□□□ -1.26
SF3B1-205ENST00000424674 KDM2AQ9Y2K7 1162 aa7.15□□□□□ -1.26
SF3B1-205ENST00000424674 NUTM2FA1L443 756 aa7.13□□□□□ -1.27
SF3B1-205ENST00000424674 ITGBL1O95965 494 aaPredicted RBP7.13□□□□□ -1.27
SF3B1-205ENST00000424674 TESPA1A2RU30 521 aaPredicted RBP7.12□□□□□ -1.27
SF3B1-205ENST00000424674 PPP4CP60510 307 aa7.12□□□□□ -1.27
SF3B1-205ENST00000424674 RNF40O75150 1001 aa7.11□□□□□ -1.27
SF3B1-205ENST00000424674 HDGFP51858 240 aaKnown RBP7.11□□□□□ -1.27
SF3B1-205ENST00000424674 SMYD5Q6GMV2 418 aa7.11□□□□□ -1.27
SF3B1-205ENST00000424674 A0A0G2JS52 829 aa7.1□□□□□ -1.27
SF3B1-205ENST00000424674 FCHSD2O94868 740 aa7.1□□□□□ -1.27
SF3B1-205ENST00000424674 SWT1Q5T5J6 900 aaKnown RBP7.09□□□□□ -1.27
SF3B1-205ENST00000424674 EYA1Q99502 592 aa7.09□□□□□ -1.27
SF3B1-205ENST00000424674 KCNC4Q03721 635 aa7.08□□□□□ -1.28
SF3B1-205ENST00000424674 VSIG10Q8N0Z9 540 aa7.08□□□□□ -1.28
SF3B1-205ENST00000424674 NECTIN2Q92692 538 aa7.08□□□□□ -1.28
SF3B1-205ENST00000424674 SLC4A3P48751 1232 aa7.07□□□□□ -1.28
SF3B1-205ENST00000424674 RBM26Q5T8P6 1007 aaKnown RBP7.07□□□□□ -1.28
SF3B1-205ENST00000424674 SLF2Q8IX21 1173 aa7.07□□□□□ -1.28
SF3B1-205ENST00000424674 RBM46Q8TBY0 533 aaKnown RBP7.07□□□□□ -1.28
SF3B1-205ENST00000424674 ADGRG1Q9Y653 693 aa7.07□□□□□ -1.28
SF3B1-205ENST00000424674 DNAJB2P25686 324 aa7.06□□□□□ -1.28
SF3B1-205ENST00000424674 HIC1Q14526 733 aa7.06□□□□□ -1.28
SF3B1-205ENST00000424674 RGS20O76081 388 aa7.05□□□□□ -1.28
SF3B1-205ENST00000424674 APLP1P51693 650 aa7.04□□□□□ -1.28
SF3B1-205ENST00000424674 TMEM134Q9H6X4 195 aa7.04□□□□□ -1.28
SF3B1-205ENST00000424674 FAM161AQ3B820 660 aa7.03□□□□□ -1.28
SF3B1-205ENST00000424674 MTRQ99707 1265 aa7.03□□□□□ -1.28
SF3B1-205ENST00000424674 RCCD1A6NED2 376 aa7.02□□□□□ -1.29
SF3B1-205ENST00000424674 GPR37O15354 613 aa7.02□□□□□ -1.29
SF3B1-205ENST00000424674 TJAP1Q5JTD0 557 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms