RNA–Protein interactions for RNA: ENST00000423311.1

LINC01399-201, Transcript of long intergenic non-protein coding RNA 1399, humanhuman

TSL 3 BASIC

Gene LINC01399, Length 648 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01399-201ENST00000423311 IQGAP3Q86VI3 1631 aa13.39□□□□□ -0.27
LINC01399-201ENST00000423311 TRIM52Q96A61 297 aa13.38□□□□□ -0.27
LINC01399-201ENST00000423311 RNF17Q9BXT8 1623 aaKnown RBP13.38□□□□□ -0.27
LINC01399-201ENST00000423311 COL17A1Q9UMD9 1497 aaPredicted RBP13.37□□□□□ -0.27
LINC01399-201ENST00000423311 PZPP20742 1482 aa13.36□□□□□ -0.27
LINC01399-201ENST00000423311 ATP10AO60312 1499 aa13.36□□□□□ -0.27
LINC01399-201ENST00000423311 NUP155O75694 1391 aa13.35□□□□□ -0.27
LINC01399-201ENST00000423311 PRDM15P57071 1507 aaPredicted RBP13.35□□□□□ -0.27
LINC01399-201ENST00000423311 ARHGEF40Q8TER5 1519 aa13.35□□□□□ -0.27
LINC01399-201ENST00000423311 MPHOSPH9Q99550 1183 aa13.35□□□□□ -0.27
LINC01399-201ENST00000423311 FAM135AQ9P2D6 1515 aa13.34□□□□□ -0.27
LINC01399-201ENST00000423311 VWDEQ8N2E2 1590 aa13.34□□□□□ -0.27
LINC01399-201ENST00000423311 YEATS2Q9ULM3 1422 aa13.34□□□□□ -0.27
LINC01399-201ENST00000423311 MROH1Q8NDA8 1641 aa13.33□□□□□ -0.28
LINC01399-201ENST00000423311 SLC4A1APQ9BWU0 796 aaKnown RBP13.33□□□□□ -0.28
LINC01399-201ENST00000423311 AGLP35573 1532 aa13.33□□□□□ -0.28
LINC01399-201ENST00000423311 TET3O43151 1660 aa13.31□□□□□ -0.28
LINC01399-201ENST00000423311 KIF3BO15066 747 aa13.31□□□□□ -0.28
LINC01399-201ENST00000423311 KANK1Q14678 1352 aa13.31□□□□□ -0.28
LINC01399-201ENST00000423311 ZC3H13Q5T200 1668 aaKnown RBP13.3□□□□□ -0.28
LINC01399-201ENST00000423311 LMTK2Q8IWU2 1503 aa13.29□□□□□ -0.28
LINC01399-201ENST00000423311 TIMELESSQ9UNS1 1208 aa13.27□□□□□ -0.29
LINC01399-201ENST00000423311 ANKRD30BQ9BXX2 1392 aa13.27□□□□□ -0.29
LINC01399-201ENST00000423311 CEP152O94986 1710 aa13.27□□□□□ -0.29
LINC01399-201ENST00000423311 E9PCH4 1651 aa13.26□□□□□ -0.29
LINC01399-201ENST00000423311 PKD2Q13563 968 aa13.26□□□□□ -0.29
LINC01399-201ENST00000423311 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.26□□□□□ -0.29
LINC01399-201ENST00000423311 PPP6R1Q9UPN7 881 aa13.26□□□□□ -0.29
LINC01399-201ENST00000423311 SIGLEC1Q9BZZ2 1709 aa13.25□□□□□ -0.29
LINC01399-201ENST00000423311 EFCAB6Q5THR3 1501 aa13.24□□□□□ -0.29
LINC01399-201ENST00000423311 RPRD2Q5VT52 1461 aaKnown RBP13.23□□□□□ -0.29
LINC01399-201ENST00000423311 SPHKAPQ2M3C7 1700 aa13.23□□□□□ -0.29
LINC01399-201ENST00000423311 ABCC3O15438 1527 aa13.23□□□□□ -0.29
LINC01399-201ENST00000423311 CAMSAP1Q5T5Y3 1602 aa13.22□□□□□ -0.29
LINC01399-201ENST00000423311 GGT6Q6P531 493 aa13.21□□□□□ -0.29
LINC01399-201ENST00000423311 WASHC2CQ9Y4E1 1318 aa13.2□□□□□ -0.3
LINC01399-201ENST00000423311 FOXD1Q16676 465 aa13.2□□□□□ -0.3
LINC01399-201ENST00000423311 PTPRTO14522 1441 aa13.2□□□□□ -0.3
LINC01399-201ENST00000423311 ARHGAP31Q2M1Z3 1444 aa13.2□□□□□ -0.3
LINC01399-201ENST00000423311 SIN3AQ96ST3 1273 aa13.19□□□□□ -0.3
LINC01399-201ENST00000423311 TRPM2O94759 1503 aa13.18□□□□□ -0.3
LINC01399-201ENST00000423311 PLA2R1Q13018 1463 aa13.17□□□□□ -0.3
LINC01399-201ENST00000423311 NEUROD1Q13562 356 aa13.17□□□□□ -0.3
LINC01399-201ENST00000423311 CLTCQ00610 1675 aaKnown RBP13.17□□□□□ -0.3
LINC01399-201ENST00000423311 TONSLQ96HA7 1378 aa13.17□□□□□ -0.3
LINC01399-201ENST00000423311 CCDC144AA2RUR9 1427 aa13.16□□□□□ -0.3
LINC01399-201ENST00000423311 MROH2AA6NES4 1674 aa13.16□□□□□ -0.3
LINC01399-201ENST00000423311 CFAP65Q6ZU64 1925 aaKnown RBP13.15□□□□□ -0.3
LINC01399-201ENST00000423311 NPATQ14207 1427 aa13.15□□□□□ -0.3
LINC01399-201ENST00000423311 NEURL4Q96JN8 1562 aa13.15□□□□□ -0.3
LINC01399-201ENST00000423311 KIF1BO60333 1816 aa13.14□□□□□ -0.31
LINC01399-201ENST00000423311 PREX1Q8TCU6 1659 aa13.14□□□□□ -0.31
LINC01399-201ENST00000423311 CNTLNQ9NXG0 1405 aa13.13□□□□□ -0.31
LINC01399-201ENST00000423311 ARID4BQ4LE39 1312 aaPredicted RBP13.13□□□□□ -0.31
LINC01399-201ENST00000423311 CLTCL1P53675 1640 aa13.12□□□□□ -0.31
LINC01399-201ENST00000423311 NOS1P29475 1434 aa13.12□□□□□ -0.31
LINC01399-201ENST00000423311 FER1L4A9Z1Z3 1794 aa13.12□□□□□ -0.31
LINC01399-201ENST00000423311 PIK3C2BO00750 1634 aa13.11□□□□□ -0.31
LINC01399-201ENST00000423311 PPP1R15AO75807 674 aaPredicted RBP13.1□□□□□ -0.31
LINC01399-201ENST00000423311 ESF1Q9H501 851 aaKnown RBP13.1□□□□□ -0.31
LINC01399-201ENST00000423311 SYNMO15061 1565 aa13.08□□□□□ -0.32
LINC01399-201ENST00000423311 SPATA31D1Q6ZQQ2 1576 aa13.08□□□□□ -0.32
LINC01399-201ENST00000423311 SPATA31E1Q6ZUB1 1445 aa13.07□□□□□ -0.32
LINC01399-201ENST00000423311 MLECQ14165 292 aa13.07□□□□□ -0.32
LINC01399-201ENST00000423311 L3MBTL2Q969R5 705 aa13.07□□□□□ -0.32
LINC01399-201ENST00000423311 ERVK-7P63135 1459 aa13.07□□□□□ -0.32
LINC01399-201ENST00000423311 STAC3Q96MF2 364 aa13.06□□□□□ -0.32
LINC01399-201ENST00000423311 SLC52A1Q9NWF4 448 aa13.06□□□□□ -0.32
LINC01399-201ENST00000423311 ZMYM3Q14202 1370 aa13.06□□□□□ -0.32
LINC01399-201ENST00000423311 ADAMTSL3P82987 1691 aa13.05□□□□□ -0.32
LINC01399-201ENST00000423311 PHF23Q9BUL5 403 aaPredicted RBP13.05□□□□□ -0.32
LINC01399-201ENST00000423311 C3P01024 1663 aa13.05□□□□□ -0.32
LINC01399-201ENST00000423311 ADGRB3O60242 1522 aa13.04□□□□□ -0.32
LINC01399-201ENST00000423311 UGGT1Q9NYU2 1555 aa13.04□□□□□ -0.32
LINC01399-201ENST00000423311 IFT172Q9UG01 1749 aa13.04□□□□□ -0.32
LINC01399-201ENST00000423311 KDM5AP29375 1690 aaKnown RBP13.03□□□□□ -0.32
LINC01399-201ENST00000423311 UHRF1BP1Q6BDS2 1440 aa13.03□□□□□ -0.32
LINC01399-201ENST00000423311 MADDQ8WXG6 1647 aa13.02□□□□□ -0.33
LINC01399-201ENST00000423311 TMEM131LA2VDJ0 1609 aa13.01□□□□□ -0.33
LINC01399-201ENST00000423311 PPLO60437 1756 aa13.01□□□□□ -0.33
LINC01399-201ENST00000423311 MYO5BQ9ULV0 1848 aa13.01□□□□□ -0.33
LINC01399-201ENST00000423311 RIMS1Q86UR5 1692 aaKnown RBP13□□□□□ -0.33
LINC01399-201ENST00000423311 FBXO31Q5XUX0 539 aaPredicted RBP13□□□□□ -0.33
LINC01399-201ENST00000423311 DCAF11Q8TEB1 546 aa13□□□□□ -0.33
LINC01399-201ENST00000423311 RPGRIP1LQ68CZ1 1315 aa12.99□□□□□ -0.33
LINC01399-201ENST00000423311 MYOM2P54296 1465 aa12.98□□□□□ -0.33
LINC01399-201ENST00000423311 IDI1Q13907 227 aa12.98□□□□□ -0.33
LINC01399-201ENST00000423311 RGL3Q3MIN7 710 aa12.98□□□□□ -0.33
LINC01399-201ENST00000423311 TNRQ92752 1358 aa12.97□□□□□ -0.33
LINC01399-201ENST00000423311 KIAA1210Q9ULL0 1709 aa12.97□□□□□ -0.33
LINC01399-201ENST00000423311 TRPM1Q7Z4N2 1603 aa12.97□□□□□ -0.33
LINC01399-201ENST00000423311 SETD1BQ9UPS6 1966 aaKnown RBP12.97□□□□□ -0.33
LINC01399-201ENST00000423311 NLRP1Q9C000 1473 aa12.97□□□□□ -0.33
LINC01399-201ENST00000423311 PRAG1Q86YV5 1406 aa12.96□□□□□ -0.33
LINC01399-201ENST00000423311 RALGAPBQ86X10 1494 aa12.96□□□□□ -0.34
LINC01399-201ENST00000423311 NBPF8Q3BBV2 869 aa12.95□□□□□ -0.34
LINC01399-201ENST00000423311 UBR1Q8IWV7 1749 aa12.95□□□□□ -0.34
LINC01399-201ENST00000423311 NRXN1Q9ULB1 1477 aa12.95□□□□□ -0.34
LINC01399-201ENST00000423311 LAMC1P11047 1609 aa12.95□□□□□ -0.34
LINC01399-201ENST00000423311 NEXMIFQ5QGS0 1516 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms