RNA–Protein interactions for RNA: ENST00000423136.1

GAPDHP55-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 55, humanhuman

BASIC

Gene GAPDHP55, Length 803 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP55-201ENST00000423136 PREX1Q8TCU6 1659 aa11.87□□□□□ -0.51
GAPDHP55-201ENST00000423136 KIAA1107Q9UPP5 1409 aa11.87□□□□□ -0.51
GAPDHP55-201ENST00000423136 NBR1Q14596 966 aa11.87□□□□□ -0.51
GAPDHP55-201ENST00000423136 AGLP35573 1532 aa11.86□□□□□ -0.51
GAPDHP55-201ENST00000423136 PAXIP1Q6ZW49 1069 aaPredicted RBP11.86□□□□□ -0.51
GAPDHP55-201ENST00000423136 A2MP01023 1474 aa11.86□□□□□ -0.51
GAPDHP55-201ENST00000423136 NCOA2Q15596 1464 aa11.86□□□□□ -0.51
GAPDHP55-201ENST00000423136 C3P01024 1663 aa11.85□□□□□ -0.51
GAPDHP55-201ENST00000423136 SLC4A2P04920 1241 aa11.85□□□□□ -0.51
GAPDHP55-201ENST00000423136 CNTLNQ9NXG0 1405 aa11.85□□□□□ -0.51
GAPDHP55-201ENST00000423136 ZMYM3Q14202 1370 aa11.84□□□□□ -0.51
GAPDHP55-201ENST00000423136 PKD2Q13563 968 aa11.84□□□□□ -0.51
GAPDHP55-201ENST00000423136 CERKQ8TCT0 537 aa11.84□□□□□ -0.51
GAPDHP55-201ENST00000423136 DMRT2Q9Y5R5 561 aa11.84□□□□□ -0.51
GAPDHP55-201ENST00000423136 KIF3BO15066 747 aa11.83□□□□□ -0.52
GAPDHP55-201ENST00000423136 VPS8Q8N3P4 1428 aa11.83□□□□□ -0.52
GAPDHP55-201ENST00000423136 INO80Q9ULG1 1556 aaPredicted RBP11.83□□□□□ -0.52
GAPDHP55-201ENST00000423136 KANK4Q5T7N3 995 aaPredicted RBP11.82□□□□□ -0.52
GAPDHP55-201ENST00000423136 CAMSAP2Q08AD1 1489 aa11.82□□□□□ -0.52
GAPDHP55-201ENST00000423136 MBD5Q9P267 1494 aa11.82□□□□□ -0.52
GAPDHP55-201ENST00000423136 TSPY4P0CV99 314 aa11.81□□□□□ -0.52
GAPDHP55-201ENST00000423136 TSPY10P0CW01 314 aa11.81□□□□□ -0.52
GAPDHP55-201ENST00000423136 APLP2Q06481 763 aa11.81□□□□□ -0.52
GAPDHP55-201ENST00000423136 RNF216Q9NWF9 866 aaPredicted RBP11.81□□□□□ -0.52
GAPDHP55-201ENST00000423136 SETD1BQ9UPS6 1966 aaKnown RBP11.81□□□□□ -0.52
GAPDHP55-201ENST00000423136 CLTCQ00610 1675 aaKnown RBP11.81□□□□□ -0.52
GAPDHP55-201ENST00000423136 CCDC141Q6ZP82 1450 aa11.79□□□□□ -0.52
GAPDHP55-201ENST00000423136 LRRC9Q6ZRR7 1453 aa11.79□□□□□ -0.52
GAPDHP55-201ENST00000423136 CFAP44Q96MT7 982 aa11.79□□□□□ -0.52
GAPDHP55-201ENST00000423136 NCKAP5LQ9HCH0 1330 aa11.79□□□□□ -0.52
GAPDHP55-201ENST00000423136 PLXNC1O60486 1568 aa11.79□□□□□ -0.52
GAPDHP55-201ENST00000423136 STRCQ7RTU9 1775 aa11.78□□□□□ -0.52
GAPDHP55-201ENST00000423136 WASHC2CQ9Y4E1 1318 aa11.78□□□□□ -0.52
GAPDHP55-201ENST00000423136 DHX29Q7Z478 1369 aaKnown RBP11.78□□□□□ -0.52
GAPDHP55-201ENST00000423136 ADGBQ8N7X0 1667 aa11.78□□□□□ -0.52
GAPDHP55-201ENST00000423136 FBXO31Q5XUX0 539 aaPredicted RBP11.77□□□□□ -0.53
GAPDHP55-201ENST00000423136 RTEL1-TNFRSF6BF6WH68 1400 aa11.77□□□□□ -0.53
GAPDHP55-201ENST00000423136 NPATQ14207 1427 aa11.77□□□□□ -0.53
GAPDHP55-201ENST00000423136 RSPH4AQ5TD94 716 aa11.76□□□□□ -0.53
GAPDHP55-201ENST00000423136 CAMSAP1Q5T5Y3 1602 aa11.75□□□□□ -0.53
GAPDHP55-201ENST00000423136 VASPP50552 380 aaPredicted RBP11.75□□□□□ -0.53
GAPDHP55-201ENST00000423136 PTPRKQ15262 1439 aa11.75□□□□□ -0.53
GAPDHP55-201ENST00000423136 MROH2AA6NES4 1674 aa11.75□□□□□ -0.53
GAPDHP55-201ENST00000423136 NCOA1Q15788 1441 aa11.74□□□□□ -0.53
GAPDHP55-201ENST00000423136 TSHZ2Q9NRE2 1034 aa11.73□□□□□ -0.53
GAPDHP55-201ENST00000423136 PTPRTO14522 1441 aa11.72□□□□□ -0.53
GAPDHP55-201ENST00000423136 MYOM3Q5VTT5 1437 aa11.72□□□□□ -0.53
GAPDHP55-201ENST00000423136 MYO3AQ8NEV4 1616 aa11.71□□□□□ -0.53
GAPDHP55-201ENST00000423136 TNRQ92752 1358 aa11.71□□□□□ -0.53
GAPDHP55-201ENST00000423136 ZNF335Q9H4Z2 1342 aaPredicted RBP11.71□□□□□ -0.53
GAPDHP55-201ENST00000423136 RRP7BPQ9NSQ0 103 aa11.71□□□□□ -0.53
GAPDHP55-201ENST00000423136 ARHGEF5Q12774 1597 aa11.71□□□□□ -0.54
GAPDHP55-201ENST00000423136 CEP170BQ9Y4F5 1589 aaPredicted RBP11.71□□□□□ -0.54
GAPDHP55-201ENST00000423136 SPRYD3Q8NCJ5 442 aa11.7□□□□□ -0.54
GAPDHP55-201ENST00000423136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.7□□□□□ -0.54
GAPDHP55-201ENST00000423136 CHIC2Q9UKJ5 165 aa11.7□□□□□ -0.54
GAPDHP55-201ENST00000423136 KDM5DQ9BY66 1539 aa11.69□□□□□ -0.54
GAPDHP55-201ENST00000423136 IFNLR1Q8IU57 520 aaPredicted RBP11.68□□□□□ -0.54
GAPDHP55-201ENST00000423136 MAP3K1Q13233 1512 aa11.67□□□□□ -0.54
GAPDHP55-201ENST00000423136 FAM50AQ14320 339 aaKnown RBP11.67□□□□□ -0.54
GAPDHP55-201ENST00000423136 NPM2Q86SE8 214 aaKnown RBP11.67□□□□□ -0.54
GAPDHP55-201ENST00000423136 A2ML1A8K2U0 1454 aa11.67□□□□□ -0.54
GAPDHP55-201ENST00000423136 MIA2Q96PC5 1412 aa11.67□□□□□ -0.54
GAPDHP55-201ENST00000423136 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.67□□□□□ -0.54
GAPDHP55-201ENST00000423136 PZPP20742 1482 aa11.66□□□□□ -0.54
GAPDHP55-201ENST00000423136 UBAP1LF5GYI3 381 aa11.66□□□□□ -0.54
GAPDHP55-201ENST00000423136 KIF15Q9NS87 1388 aa11.66□□□□□ -0.54
GAPDHP55-201ENST00000423136 ZNF142P52746 1687 aaPredicted RBP11.65□□□□□ -0.54
GAPDHP55-201ENST00000423136 THEMISQ8N1K5 641 aaPredicted RBP11.65□□□□□ -0.54
GAPDHP55-201ENST00000423136 DNMT1P26358 1616 aaKnown RBP11.64□□□□□ -0.55
GAPDHP55-201ENST00000423136 LTBP4Q8N2S1 1624 aa11.64□□□□□ -0.55
GAPDHP55-201ENST00000423136 PLA2R1Q13018 1463 aa11.64□□□□□ -0.55
GAPDHP55-201ENST00000423136 ANKLE2Q86XL3 938 aa11.64□□□□□ -0.55
GAPDHP55-201ENST00000423136 KLHL34Q8N239 644 aa11.64□□□□□ -0.55
GAPDHP55-201ENST00000423136 PTPN23Q9H3S7 1636 aa11.64□□□□□ -0.55
GAPDHP55-201ENST00000423136 TCOF1Q13428 1488 aaKnown RBP11.63□□□□□ -0.55
GAPDHP55-201ENST00000423136 ABCC5O15440 1437 aa11.63□□□□□ -0.55
GAPDHP55-201ENST00000423136 PPARGC1BQ86YN6 1023 aaKnown RBP11.63□□□□□ -0.55
GAPDHP55-201ENST00000423136 ABCC3O15438 1527 aa11.63□□□□□ -0.55
GAPDHP55-201ENST00000423136 MAST1Q9Y2H9 1570 aa11.62□□□□□ -0.55
GAPDHP55-201ENST00000423136 FGD6Q6ZV73 1430 aa11.62□□□□□ -0.55
GAPDHP55-201ENST00000423136 DISP3Q9P2K9 1392 aa11.62□□□□□ -0.55
GAPDHP55-201ENST00000423136 DAPK1P53355 1430 aa11.61□□□□□ -0.55
GAPDHP55-201ENST00000423136 DUOX2Q9NRD8 1548 aa11.61□□□□□ -0.55
GAPDHP55-201ENST00000423136 CFAP65Q6ZU64 1925 aaKnown RBP11.61□□□□□ -0.55
GAPDHP55-201ENST00000423136 PIP4K2BP78356 416 aa11.61□□□□□ -0.55
GAPDHP55-201ENST00000423136 UGGT1Q9NYU2 1555 aa11.61□□□□□ -0.55
GAPDHP55-201ENST00000423136 FAM135AQ9P2D6 1515 aa11.6□□□□□ -0.55
GAPDHP55-201ENST00000423136 RNF17Q9BXT8 1623 aaKnown RBP11.6□□□□□ -0.55
GAPDHP55-201ENST00000423136 NLRP1Q9C000 1473 aa11.59□□□□□ -0.55
GAPDHP55-201ENST00000423136 KANK1Q14678 1352 aa11.59□□□□□ -0.55
GAPDHP55-201ENST00000423136 ANKRD30AQ9BXX3 1397 aa11.59□□□□□ -0.55
GAPDHP55-201ENST00000423136 ITGAEP38570 1179 aa11.59□□□□□ -0.55
GAPDHP55-201ENST00000423136 STAG3Q9UJ98 1225 aa11.59□□□□□ -0.55
GAPDHP55-201ENST00000423136 CEP152O94986 1710 aa11.59□□□□□ -0.55
GAPDHP55-201ENST00000423136 ERVK-7P63135 1459 aa11.58□□□□□ -0.56
GAPDHP55-201ENST00000423136 EIF2AK4Q9P2K8 1649 aaKnown RBP11.58□□□□□ -0.56
GAPDHP55-201ENST00000423136 SHANK2Q9UPX8 1470 aa11.57□□□□□ -0.56
GAPDHP55-201ENST00000423136 MROH1Q8NDA8 1641 aa11.57□□□□□ -0.56
GAPDHP55-201ENST00000423136 CROCC2H7BZ55 1655 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms