RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 RPRD2Q5VT52 1461 aaKnown RBP7.21□□□□□ -1.25
ITGB1-205ENST00000423113 ARHGAP31Q2M1Z3 1444 aa7.21□□□□□ -1.25
ITGB1-205ENST00000423113 MYO3AQ8NEV4 1616 aa7.21□□□□□ -1.26
ITGB1-205ENST00000423113 PTPRKQ15262 1439 aa7.21□□□□□ -1.26
ITGB1-205ENST00000423113 CDK11AQ9UQ88 783 aaPredicted RBP7.21□□□□□ -1.26
ITGB1-205ENST00000423113 TRAPPC8Q9Y2L5 1435 aa7.2□□□□□ -1.26
ITGB1-205ENST00000423113 UBR1Q8IWV7 1749 aa7.2□□□□□ -1.26
ITGB1-205ENST00000423113 PPLO60437 1756 aa7.2□□□□□ -1.26
ITGB1-205ENST00000423113 MTUS2Q5JR59 1369 aa7.2□□□□□ -1.26
ITGB1-205ENST00000423113 RSPH4AQ5TD94 716 aa7.2□□□□□ -1.26
ITGB1-205ENST00000423113 ABCC3O15438 1527 aa7.2□□□□□ -1.26
ITGB1-205ENST00000423113 NCOA1Q15788 1441 aa7.19□□□□□ -1.26
ITGB1-205ENST00000423113 CYB5RLQ6IPT4 315 aa7.19□□□□□ -1.26
ITGB1-205ENST00000423113 CCER1Q8TC90 406 aaPredicted RBP7.19□□□□□ -1.26
ITGB1-205ENST00000423113 CCNB3Q8WWL7 1395 aa7.19□□□□□ -1.26
ITGB1-205ENST00000423113 LAMC1P11047 1609 aa7.18□□□□□ -1.26
ITGB1-205ENST00000423113 TRPM2O94759 1503 aa7.18□□□□□ -1.26
ITGB1-205ENST00000423113 UGGT1Q9NYU2 1555 aa7.18□□□□□ -1.26
ITGB1-205ENST00000423113 SYNMO15061 1565 aa7.18□□□□□ -1.26
ITGB1-205ENST00000423113 KIF1BO60333 1816 aa7.18□□□□□ -1.26
ITGB1-205ENST00000423113 MYO5BQ9ULV0 1848 aa7.18□□□□□ -1.26
ITGB1-205ENST00000423113 KANK4Q5T7N3 995 aaPredicted RBP7.17□□□□□ -1.26
ITGB1-205ENST00000423113 KNDC1Q76NI1 1749 aa7.17□□□□□ -1.26
ITGB1-205ENST00000423113 NAIPQ13075 1403 aa7.17□□□□□ -1.26
ITGB1-205ENST00000423113 A2MP01023 1474 aa7.17□□□□□ -1.26
ITGB1-205ENST00000423113 PLEKHD1A6NEE1 506 aa7.16□□□□□ -1.26
ITGB1-205ENST00000423113 RIMS1Q86UR5 1692 aaKnown RBP7.16□□□□□ -1.26
ITGB1-205ENST00000423113 TMEM131LA2VDJ0 1609 aa7.16□□□□□ -1.26
ITGB1-205ENST00000423113 PRAG1Q86YV5 1406 aa7.15□□□□□ -1.26
ITGB1-205ENST00000423113 SCAPERQ9BY12 1400 aa7.15□□□□□ -1.27
ITGB1-205ENST00000423113 PTPRTO14522 1441 aa7.14□□□□□ -1.27
ITGB1-205ENST00000423113 NPATQ14207 1427 aa7.14□□□□□ -1.27
ITGB1-205ENST00000423113 NPM1P06748 294 aaKnown RBP eCLIP7.14□□□□□ -1.27
ITGB1-205ENST00000423113 PZPP20742 1482 aa7.14□□□□□ -1.27
ITGB1-205ENST00000423113 ADGRB3O60242 1522 aa7.13□□□□□ -1.27
ITGB1-205ENST00000423113 CNTLNQ9NXG0 1405 aa7.13□□□□□ -1.27
ITGB1-205ENST00000423113 DHX29Q7Z478 1369 aaKnown RBP7.13□□□□□ -1.27
ITGB1-205ENST00000423113 YEATS2Q9ULM3 1422 aa7.12□□□□□ -1.27
ITGB1-205ENST00000423113 STRCQ7RTU9 1775 aa7.12□□□□□ -1.27
ITGB1-205ENST00000423113 CLTCL1P53675 1640 aa7.12□□□□□ -1.27
ITGB1-205ENST00000423113 PLPPR3Q6T4P5 718 aa7.12□□□□□ -1.27
ITGB1-205ENST00000423113 NRXN3Q9Y4C0 1643 aa7.12□□□□□ -1.27
ITGB1-205ENST00000423113 PPP6R1Q9UPN7 881 aa7.12□□□□□ -1.27
ITGB1-205ENST00000423113 SETD1BQ9UPS6 1966 aaKnown RBP7.11□□□□□ -1.27
ITGB1-205ENST00000423113 NOS1P29475 1434 aa7.11□□□□□ -1.27
ITGB1-205ENST00000423113 SLIT1O75093 1534 aa7.11□□□□□ -1.27
ITGB1-205ENST00000423113 DIP2AQ14689 1571 aa7.11□□□□□ -1.27
ITGB1-205ENST00000423113 EFCAB2Q5VUJ9 269 aa7.11□□□□□ -1.27
ITGB1-205ENST00000423113 NRXN1Q9ULB1 1477 aa7.1□□□□□ -1.27
ITGB1-205ENST00000423113 APLP2Q06481 763 aa7.1□□□□□ -1.27
ITGB1-205ENST00000423113 NWD1Q149M9 1564 aa7.1□□□□□ -1.27
ITGB1-205ENST00000423113 P3H3Q8IVL6 736 aa7.1□□□□□ -1.27
ITGB1-205ENST00000423113 ARHGAP23Q9P227 1491 aa7.08□□□□□ -1.28
ITGB1-205ENST00000423113 SETBP1Q9Y6X0 1596 aa7.08□□□□□ -1.28
ITGB1-205ENST00000423113 LMTK3Q96Q04 1460 aa7.08□□□□□ -1.28
ITGB1-205ENST00000423113 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.07□□□□□ -1.28
ITGB1-205ENST00000423113 IQGAP1P46940 1657 aa7.07□□□□□ -1.28
ITGB1-205ENST00000423113 XIRP1Q702N8 1843 aaKnown RBP7.07□□□□□ -1.28
ITGB1-205ENST00000423113 XRN1Q8IZH2 1706 aaKnown RBP7.07□□□□□ -1.28
ITGB1-205ENST00000423113 CEP170BQ9Y4F5 1589 aaPredicted RBP7.07□□□□□ -1.28
ITGB1-205ENST00000423113 ANKRD30AQ9BXX3 1397 aa7.07□□□□□ -1.28
ITGB1-205ENST00000423113 ERVK-7P63135 1459 aa7.07□□□□□ -1.28
ITGB1-205ENST00000423113 FAM69CQ0P6D2 419 aa7.06□□□□□ -1.28
ITGB1-205ENST00000423113 CHD2O14647 1828 aaKnown RBP7.06□□□□□ -1.28
ITGB1-205ENST00000423113 RTN4Q9NQC3 1192 aaKnown RBP7.06□□□□□ -1.28
ITGB1-205ENST00000423113 PLA2R1Q13018 1463 aa7.06□□□□□ -1.28
ITGB1-205ENST00000423113 BCANQ96GW7 911 aa7.06□□□□□ -1.28
ITGB1-205ENST00000423113 TRPM1Q7Z4N2 1603 aa7.06□□□□□ -1.28
ITGB1-205ENST00000423113 NEXMIFQ5QGS0 1516 aa7.06□□□□□ -1.28
ITGB1-205ENST00000423113 NLRP1Q9C000 1473 aa7.06□□□□□ -1.28
ITGB1-205ENST00000423113 MED14O60244 1454 aa7.05□□□□□ -1.28
ITGB1-205ENST00000423113 ANO8Q9HCE9 1232 aaPredicted RBP7.05□□□□□ -1.28
ITGB1-205ENST00000423113 ANKRD50Q9ULJ7 1429 aa7.05□□□□□ -1.28
ITGB1-205ENST00000423113 USP54Q70EL1 1684 aa7.05□□□□□ -1.28
ITGB1-205ENST00000423113 MYOM2P54296 1465 aa7.04□□□□□ -1.28
ITGB1-205ENST00000423113 TRHP20396 242 aaPredicted RBP7.04□□□□□ -1.28
ITGB1-205ENST00000423113 KIF15Q9NS87 1388 aa7.04□□□□□ -1.28
ITGB1-205ENST00000423113 ZFYVE9O95405 1425 aa7.03□□□□□ -1.28
ITGB1-205ENST00000423113 SETD5Q9C0A6 1442 aa7.03□□□□□ -1.28
ITGB1-205ENST00000423113 CFDP1Q9UEE9 299 aaPredicted RBP7.03□□□□□ -1.28
ITGB1-205ENST00000423113 ALKQ9UM73 1620 aa7.03□□□□□ -1.28
ITGB1-205ENST00000423113 PTPRMP28827 1452 aa7.02□□□□□ -1.29
ITGB1-205ENST00000423113 EIF5BO60841 1220 aaKnown RBP7.02□□□□□ -1.29
ITGB1-205ENST00000423113 STRCP1A6NGW2 1772 aa7.02□□□□□ -1.29
ITGB1-205ENST00000423113 CCDC136Q96JN2 1154 aa7.02□□□□□ -1.29
ITGB1-205ENST00000423113 ADGRB2O60241 1585 aa7.02□□□□□ -1.29
ITGB1-205ENST00000423113 ZNF644Q9H582 1327 aaPredicted RBP7.01□□□□□ -1.29
ITGB1-205ENST00000423113 A2ML1A8K2U0 1454 aa7.01□□□□□ -1.29
ITGB1-205ENST00000423113 ARHGEF28Q8N1W1 1705 aaKnown RBP7.01□□□□□ -1.29
ITGB1-205ENST00000423113 SPATA31E1Q6ZUB1 1445 aa7.01□□□□□ -1.29
ITGB1-205ENST00000423113 TSHZ2Q9NRE2 1034 aa7.01□□□□□ -1.29
ITGB1-205ENST00000423113 TOPAZ1Q8N9V7 1692 aa7□□□□□ -1.29
ITGB1-205ENST00000423113 CPS1P31327 1500 aa6.99□□□□□ -1.29
ITGB1-205ENST00000423113 NEFLP07196 543 aa6.99□□□□□ -1.29
ITGB1-205ENST00000423113 SPAG9O60271 1321 aaKnown RBP6.99□□□□□ -1.29
ITGB1-205ENST00000423113 CLSPNQ9HAW4 1339 aa6.98□□□□□ -1.29
ITGB1-205ENST00000423113 UHRF1BP1Q6BDS2 1440 aa6.98□□□□□ -1.29
ITGB1-205ENST00000423113 IQSEC2Q5JU85 1478 aa6.97□□□□□ -1.29
ITGB1-205ENST00000423113 DLC1Q96QB1 1528 aa6.97□□□□□ -1.29
ITGB1-205ENST00000423113 ADGRB1O14514 1584 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms