RNA–Protein interactions for RNA: ENST00000421386.1

SCG2-202, Transcript of secretogranin II, humanhuman

TSL 3

Gene SCG2, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-202ENST00000421386 BCAMP50895 628 aa8.35□□□□□ -1.07
SCG2-202ENST00000421386 PRKCSHP14314 528 aaPredicted RBP8.34□□□□□ -1.07
SCG2-202ENST00000421386 NBPF3Q9H094 633 aa8.34□□□□□ -1.07
SCG2-202ENST00000421386 RABGEF1Q9UJ41 708 aa8.34□□□□□ -1.07
SCG2-202ENST00000421386 DPYSL4O14531 572 aa8.33□□□□□ -1.08
SCG2-202ENST00000421386 CAMK2BQ13554 666 aa8.33□□□□□ -1.08
SCG2-202ENST00000421386 PHF14O94880 888 aa8.32□□□□□ -1.08
SCG2-202ENST00000421386 TYW1BQ6NUM6 668 aa8.32□□□□□ -1.08
SCG2-202ENST00000421386 KIAA1468Q9P260 1216 aa8.32□□□□□ -1.08
SCG2-202ENST00000421386 SEPT9Q9UHD8 586 aaPredicted RBP8.31□□□□□ -1.08
SCG2-202ENST00000421386 C6orf132Q5T0Z8 1188 aa8.29□□□□□ -1.08
SCG2-202ENST00000421386 FBXW7Q969H0 707 aa8.29□□□□□ -1.08
SCG2-202ENST00000421386 RBM33Q96EV2 1170 aaKnown RBP8.29□□□□□ -1.08
SCG2-202ENST00000421386 SOWAHBA6NEL2 793 aa8.28□□□□□ -1.08
SCG2-202ENST00000421386 ITGBL1O95965 494 aaPredicted RBP8.28□□□□□ -1.08
SCG2-202ENST00000421386 ANKK1Q8NFD2 765 aa8.28□□□□□ -1.08
SCG2-202ENST00000421386 DDX12PQ92771 950 aa8.28□□□□□ -1.08
SCG2-202ENST00000421386 ZFRQ96KR1 1074 aaKnown RBP8.28□□□□□ -1.08
SCG2-202ENST00000421386 WBP1LQ9NX94 342 aa8.28□□□□□ -1.08
SCG2-202ENST00000421386 PRIM1P49642 420 aaKnown RBP8.26□□□□□ -1.09
SCG2-202ENST00000421386 TRIM6-TRIM34B2RNG4 842 aa8.25□□□□□ -1.09
SCG2-202ENST00000421386 RGS20O76081 388 aa8.25□□□□□ -1.09
SCG2-202ENST00000421386 TSR1Q2NL82 804 aaKnown RBP8.25□□□□□ -1.09
SCG2-202ENST00000421386 C3orf80F5H4A9 247 aa8.24□□□□□ -1.09
SCG2-202ENST00000421386 LAPTM4BQ86VI4 370 aa8.24□□□□□ -1.09
SCG2-202ENST00000421386 IRX2Q9BZI1 471 aaPredicted RBP8.24□□□□□ -1.09
SCG2-202ENST00000421386 TSKSQ9UJT2 592 aa8.24□□□□□ -1.09
SCG2-202ENST00000421386 EPAS1Q99814 870 aa8.23□□□□□ -1.09
SCG2-202ENST00000421386 BCL11AQ9H165 835 aa8.23□□□□□ -1.09
SCG2-202ENST00000421386 RTN4Q9NQC3 1192 aaKnown RBP8.23□□□□□ -1.09
SCG2-202ENST00000421386 FAM198AQ9UFP1 575 aa8.22□□□□□ -1.09
SCG2-202ENST00000421386 ONECUT3O60422 494 aaPredicted RBP8.2□□□□□ -1.1
SCG2-202ENST00000421386 NBR1Q14596 966 aa8.2□□□□□ -1.1
SCG2-202ENST00000421386 BBXQ8WY36 941 aaPredicted RBP8.2□□□□□ -1.1
SCG2-202ENST00000421386 EN1Q05925 392 aaPredicted RBP8.19□□□□□ -1.1
SCG2-202ENST00000421386 FAM98CQ17RN3 349 aaKnown RBP8.19□□□□□ -1.1
SCG2-202ENST00000421386 AMER1Q5JTC6 1135 aaPredicted RBP8.19□□□□□ -1.1
SCG2-202ENST00000421386 HPS5Q9UPZ3 1129 aa8.19□□□□□ -1.1
SCG2-202ENST00000421386 SMAPO00193 183 aa8.18□□□□□ -1.1
SCG2-202ENST00000421386 SLC24A1O60721 1099 aa8.18□□□□□ -1.1
SCG2-202ENST00000421386 CENPBP07199 599 aaPredicted RBP8.18□□□□□ -1.1
SCG2-202ENST00000421386 PDIA6Q15084 440 aa8.18□□□□□ -1.1
SCG2-202ENST00000421386 LCE2BO14633 110 aa8.17□□□□□ -1.1
SCG2-202ENST00000421386 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.17□□□□□ -1.1
SCG2-202ENST00000421386 MAP3K7O43318 606 aa8.16□□□□□ -1.1
SCG2-202ENST00000421386 TSR3Q9UJK0 312 aaKnown RBP8.16□□□□□ -1.1
SCG2-202ENST00000421386 KCNC4Q03721 635 aa8.15□□□□□ -1.1
SCG2-202ENST00000421386 LRCH3Q96II8 777 aa8.15□□□□□ -1.1
SCG2-202ENST00000421386 CDHR5Q9HBB8 845 aa8.15□□□□□ -1.1
SCG2-202ENST00000421386 ZEB1P37275 1124 aaPredicted RBP8.13□□□□□ -1.11
SCG2-202ENST00000421386 NYAP1Q6ZVC0 841 aa8.13□□□□□ -1.11
SCG2-202ENST00000421386 SAMD7Q7Z3H4 446 aa8.12□□□□□ -1.11
SCG2-202ENST00000421386 CDCA7LQ96GN5 454 aa8.12□□□□□ -1.11
SCG2-202ENST00000421386 TJAP1Q5JTD0 557 aa8.11□□□□□ -1.11
SCG2-202ENST00000421386 GRXCR2A6NFK2 248 aa8.1□□□□□ -1.11
SCG2-202ENST00000421386 PRSS12P56730 875 aa8.1□□□□□ -1.11
SCG2-202ENST00000421386 SPRYD3Q8NCJ5 442 aa8.1□□□□□ -1.11
SCG2-202ENST00000421386 Q6ZNB5 142 aa8.09□□□□□ -1.11
SCG2-202ENST00000421386 PACS2Q86VP3 889 aa8.09□□□□□ -1.11
SCG2-202ENST00000421386 PPARGC1BQ86YN6 1023 aaKnown RBP8.09□□□□□ -1.11
SCG2-202ENST00000421386 ACIN1Q9UKV3 1341 aaKnown RBP8.08□□□□□ -1.12
SCG2-202ENST00000421386 SPDYE16A6NNV3 312 aaPredicted RBP8.08□□□□□ -1.12
SCG2-202ENST00000421386 OSBPP22059 807 aa8.08□□□□□ -1.12
SCG2-202ENST00000421386 PPP4CP60510 307 aa8.07□□□□□ -1.12
SCG2-202ENST00000421386 E2F4Q16254 413 aa8.07□□□□□ -1.12
SCG2-202ENST00000421386 FAM9AQ8IZU1 332 aaPredicted RBP8.07□□□□□ -1.12
SCG2-202ENST00000421386 ZNF516Q92618 1163 aa8.07□□□□□ -1.12
SCG2-202ENST00000421386 TATDN2Q93075 761 aa8.07□□□□□ -1.12
SCG2-202ENST00000421386 MTRQ99707 1265 aa8.07□□□□□ -1.12
SCG2-202ENST00000421386 PNMA3Q9UL41 463 aa8.07□□□□□ -1.12
SCG2-202ENST00000421386 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.06□□□□□ -1.12
SCG2-202ENST00000421386 APLP1P51693 650 aa8.05□□□□□ -1.12
SCG2-202ENST00000421386 PAXIP1Q6ZW49 1069 aaPredicted RBP8.05□□□□□ -1.12
SCG2-202ENST00000421386 CFAP44Q96MT7 982 aa8.05□□□□□ -1.12
SCG2-202ENST00000421386 ARIH1Q9Y4X5 557 aaPredicted RBP8.05□□□□□ -1.12
SCG2-202ENST00000421386 NUDT18Q6ZVK8 323 aa8.04□□□□□ -1.12
SCG2-202ENST00000421386 NPDC1Q9NQX5 325 aaPredicted RBP8.04□□□□□ -1.12
SCG2-202ENST00000421386 NKX2-3Q8TAU0 364 aa8.03□□□□□ -1.12
SCG2-202ENST00000421386 NISCHQ9Y2I1 1504 aa8.03□□□□□ -1.12
SCG2-202ENST00000421386 PPP1R18Q6NYC8 613 aa8.02□□□□□ -1.13
SCG2-202ENST00000421386 NBPF26B4DH59 902 aa8.01□□□□□ -1.13
SCG2-202ENST00000421386 RNF40O75150 1001 aa8.01□□□□□ -1.13
SCG2-202ENST00000421386 PADI6Q6TGC4 694 aa8.01□□□□□ -1.13
SCG2-202ENST00000421386 TTC13Q8NBP0 860 aa8.01□□□□□ -1.13
SCG2-202ENST00000421386 PRKD2Q9BZL6 878 aa8.01□□□□□ -1.13
SCG2-202ENST00000421386 DCAF1Q9Y4B6 1507 aa8.01□□□□□ -1.13
SCG2-202ENST00000421386 GFRA3O60609 400 aa8□□□□□ -1.13
SCG2-202ENST00000421386 IL21Q9HBE4 155 aa8□□□□□ -1.13
SCG2-202ENST00000421386 CERKQ8TCT0 537 aa7.99□□□□□ -1.13
SCG2-202ENST00000421386 DAXXQ9UER7 740 aaPredicted RBP7.99□□□□□ -1.13
SCG2-202ENST00000421386 CCDC180Q9P1Z9 1646 aa7.99□□□□□ -1.13
SCG2-202ENST00000421386 SWT1Q5T5J6 900 aaKnown RBP7.98□□□□□ -1.13
SCG2-202ENST00000421386 ANP32EQ9BTT0 268 aa7.97□□□□□ -1.13
SCG2-202ENST00000421386 PCGF6Q9BYE7 350 aa7.97□□□□□ -1.13
SCG2-202ENST00000421386 MLLT3P42568 568 aaPredicted RBP7.96□□□□□ -1.14
SCG2-202ENST00000421386 COPS2P61201 443 aa7.96□□□□□ -1.14
SCG2-202ENST00000421386 RBM27Q9P2N5 1060 aaKnown RBP7.96□□□□□ -1.14
SCG2-202ENST00000421386 TRAF7Q6Q0C0 670 aa7.95□□□□□ -1.14
SCG2-202ENST00000421386 EMID1Q96A84 441 aaPredicted RBP7.95□□□□□ -1.14
SCG2-202ENST00000421386 EYA1Q99502 592 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms