RNA–Protein interactions for RNA: ENST00000420995.6

TRIM13-204, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-204ENST00000420995 SHANK2Q9UPX8 1470 aa21.31■■□□□ 1
TRIM13-204ENST00000420995 ABCA8O94911 1581 aa21.31■■□□□ 1
TRIM13-204ENST00000420995 ATP10BO94823 1461 aa21.3■■□□□ 1
TRIM13-204ENST00000420995 ANP32AP39687 249 aaKnown RBP21.3■■□□□ 1
TRIM13-204ENST00000420995 MYT1LQ9UL68 1186 aa21.3■■□□□ 1
TRIM13-204ENST00000420995 TSPY4P0CV99 314 aa21.3■■□□□ 1
TRIM13-204ENST00000420995 TSPY10P0CW01 314 aa21.3■■□□□ 1
TRIM13-204ENST00000420995 RALBP1Q15311 655 aa21.29■■□□□ 1
TRIM13-204ENST00000420995 ABCC10Q5T3U5 1492 aa21.29■■□□□ 1
TRIM13-204ENST00000420995 HNRNPMP52272 730 aaKnown RBP eCLIP21.28■■□□□ 1
TRIM13-204ENST00000420995 RRP1P56182 461 aaKnown RBP21.28■■□□□ 1
TRIM13-204ENST00000420995 IPO9Q96P70 1041 aaKnown RBP21.28■■□□□ 1
TRIM13-204ENST00000420995 KDM5DQ9BY66 1539 aa21.28■■□□□ 1
TRIM13-204ENST00000420995 EXOC6Q8TAG9 804 aa21.26■□□□□ 0.99
TRIM13-204ENST00000420995 KTN1Q86UP2 1357 aaKnown RBP21.25■□□□□ 0.99
TRIM13-204ENST00000420995 PTPRGP23470 1445 aa21.25■□□□□ 0.99
TRIM13-204ENST00000420995 E9PCH4 1651 aa21.24■□□□□ 0.99
TRIM13-204ENST00000420995 RCAN3Q9UKA8 241 aa21.24■□□□□ 0.99
TRIM13-204ENST00000420995 NLRP13Q86W25 1043 aa21.22■□□□□ 0.99
TRIM13-204ENST00000420995 PARD3Q8TEW0 1356 aa21.2■□□□□ 0.99
TRIM13-204ENST00000420995 NBPF1Q3BBV0 1214 aa21.2■□□□□ 0.98
TRIM13-204ENST00000420995 RGL3Q3MIN7 710 aa21.2■□□□□ 0.98
TRIM13-204ENST00000420995 ZBTB47Q9UFB7 747 aaPredicted RBP21.2■□□□□ 0.98
TRIM13-204ENST00000420995 FAM135AQ9P2D6 1515 aa21.19■□□□□ 0.98
TRIM13-204ENST00000420995 CHD1O14646 1710 aa21.19■□□□□ 0.98
TRIM13-204ENST00000420995 PRAG1Q86YV5 1406 aa21.19■□□□□ 0.98
TRIM13-204ENST00000420995 CDCA7LQ96GN5 454 aa21.18■□□□□ 0.98
TRIM13-204ENST00000420995 NPM2Q86SE8 214 aaKnown RBP21.17■□□□□ 0.98
TRIM13-204ENST00000420995 CCDC144AA2RUR9 1427 aa21.16■□□□□ 0.98
TRIM13-204ENST00000420995 PER1O15534 1290 aaPredicted RBP21.16■□□□□ 0.98
TRIM13-204ENST00000420995 CC2D1BQ5T0F9 858 aaKnown RBP21.15■□□□□ 0.98
TRIM13-204ENST00000420995 TRPM1Q7Z4N2 1603 aa21.14■□□□□ 0.98
TRIM13-204ENST00000420995 ARHGEF5Q12774 1597 aa21.14■□□□□ 0.97
TRIM13-204ENST00000420995 CCDC141Q6ZP82 1450 aa21.13■□□□□ 0.97
TRIM13-204ENST00000420995 DISP3Q9P2K9 1392 aa21.12■□□□□ 0.97
TRIM13-204ENST00000420995 PDE3BQ13370 1112 aa21.12■□□□□ 0.97
TRIM13-204ENST00000420995 PLIN1O60240 522 aa21.11■□□□□ 0.97
TRIM13-204ENST00000420995 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.11■□□□□ 0.97
TRIM13-204ENST00000420995 SAMD9LQ8IVG5 1584 aa21.11■□□□□ 0.97
TRIM13-204ENST00000420995 TCERG1O14776 1098 aaKnown RBP21.11■□□□□ 0.97
TRIM13-204ENST00000420995 ERCC6L2Q5T890 1561 aa21.11■□□□□ 0.97
TRIM13-204ENST00000420995 PLA2R1Q13018 1463 aa21.1■□□□□ 0.97
TRIM13-204ENST00000420995 A2MP01023 1474 aa21.1■□□□□ 0.97
TRIM13-204ENST00000420995 PDE4AP27815 886 aa21.09■□□□□ 0.97
TRIM13-204ENST00000420995 COL17A1Q9UMD9 1497 aaPredicted RBP21.09■□□□□ 0.97
TRIM13-204ENST00000420995 TESK2Q96S53 571 aa21.09■□□□□ 0.97
TRIM13-204ENST00000420995 RTL5Q5HYW3 569 aaPredicted RBP21.08■□□□□ 0.97
TRIM13-204ENST00000420995 CDC42BPBQ9Y5S2 1711 aa21.08■□□□□ 0.97
TRIM13-204ENST00000420995 GPRASP1Q5JY77 1395 aa21.08■□□□□ 0.96
TRIM13-204ENST00000420995 PANK3Q9H999 370 aa21.07■□□□□ 0.96
TRIM13-204ENST00000420995 SKAP1Q86WV1 359 aa21.07■□□□□ 0.96
TRIM13-204ENST00000420995 BACH2Q9BYV9 841 aa21.05■□□□□ 0.96
TRIM13-204ENST00000420995 BLMP54132 1417 aaPredicted RBP21.04■□□□□ 0.96
TRIM13-204ENST00000420995 SYCP2Q9BX26 1530 aa21.04■□□□□ 0.96
TRIM13-204ENST00000420995 PRDM15P57071 1507 aaPredicted RBP21.03■□□□□ 0.96
TRIM13-204ENST00000420995 ERBINQ96RT1 1412 aa21.03■□□□□ 0.96
TRIM13-204ENST00000420995 PREX2Q70Z35 1606 aa21.03■□□□□ 0.96
TRIM13-204ENST00000420995 CRBNQ96SW2 442 aa21.02■□□□□ 0.96
TRIM13-204ENST00000420995 SHROOM2Q13796 1616 aa21.02■□□□□ 0.96
TRIM13-204ENST00000420995 WASHC2CQ9Y4E1 1318 aa21.01■□□□□ 0.95
TRIM13-204ENST00000420995 TTC37Q6PGP7 1564 aa21.01■□□□□ 0.95
TRIM13-204ENST00000420995 LAS1LQ9Y4W2 734 aaKnown RBP21.01■□□□□ 0.95
TRIM13-204ENST00000420995 RSPH4AQ5TD94 716 aa21■□□□□ 0.95
TRIM13-204ENST00000420995 MS4A1P11836 297 aa21■□□□□ 0.95
TRIM13-204ENST00000420995 TMF1P82094 1093 aa20.99■□□□□ 0.95
TRIM13-204ENST00000420995 UNC13BO14795 1591 aa20.98■□□□□ 0.95
TRIM13-204ENST00000420995 PLEKHH2Q8IVE3 1493 aa20.98■□□□□ 0.95
TRIM13-204ENST00000420995 C20orf194Q5TEA3 1177 aa20.98■□□□□ 0.95
TRIM13-204ENST00000420995 ARHGAP5Q13017 1502 aa20.97■□□□□ 0.95
TRIM13-204ENST00000420995 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.97■□□□□ 0.95
TRIM13-204ENST00000420995 LAMC1P11047 1609 aa20.96■□□□□ 0.95
TRIM13-204ENST00000420995 ADAMTS8Q9UP79 889 aa20.96■□□□□ 0.95
TRIM13-204ENST00000420995 MYO5CQ9NQX4 1742 aa20.94■□□□□ 0.94
TRIM13-204ENST00000420995 INSRP06213 1382 aa20.94■□□□□ 0.94
TRIM13-204ENST00000420995 ZMYM4Q5VZL5 1548 aa20.93■□□□□ 0.94
TRIM13-204ENST00000420995 EIF2AK4Q9P2K8 1649 aaKnown RBP20.92■□□□□ 0.94
TRIM13-204ENST00000420995 NEFMP07197 916 aa20.92■□□□□ 0.94
TRIM13-204ENST00000420995 IQGAP3Q86VI3 1631 aa20.92■□□□□ 0.94
TRIM13-204ENST00000420995 ABCC2Q92887 1545 aa20.92■□□□□ 0.94
TRIM13-204ENST00000420995 MAST1Q9Y2H9 1570 aa20.91■□□□□ 0.94
TRIM13-204ENST00000420995 MAGI2Q86UL8 1455 aa20.9■□□□□ 0.94
TRIM13-204ENST00000420995 PLEKHH1Q9ULM0 1364 aa20.9■□□□□ 0.94
TRIM13-204ENST00000420995 WDR7Q9Y4E6 1490 aa20.88■□□□□ 0.93
TRIM13-204ENST00000420995 PPP2R1AP30153 589 aa20.88■□□□□ 0.93
TRIM13-204ENST00000420995 KNSTRNQ9Y448 316 aa20.87■□□□□ 0.93
TRIM13-204ENST00000420995 PLXNC1O60486 1568 aa20.87■□□□□ 0.93
TRIM13-204ENST00000420995 ATP10AO60312 1499 aa20.86■□□□□ 0.93
TRIM13-204ENST00000420995 WDR43Q15061 677 aaKnown RBP eCLIP20.86■□□□□ 0.93
TRIM13-204ENST00000420995 DUSP27Q5VZP5 1158 aa20.86■□□□□ 0.93
TRIM13-204ENST00000420995 KDM2BQ8NHM5 1336 aa20.85■□□□□ 0.93
TRIM13-204ENST00000420995 RNF17Q9BXT8 1623 aaKnown RBP20.85■□□□□ 0.93
TRIM13-204ENST00000420995 DUOX2Q9NRD8 1548 aa20.84■□□□□ 0.93
TRIM13-204ENST00000420995 AMER1Q5JTC6 1135 aaPredicted RBP20.84■□□□□ 0.93
TRIM13-204ENST00000420995 ZCCHC11Q5TAX3 1644 aaKnown RBP20.83■□□□□ 0.93
TRIM13-204ENST00000420995 CLASP1Q7Z460 1538 aa20.82■□□□□ 0.92
TRIM13-204ENST00000420995 ZNF521Q96K83 1311 aa20.81■□□□□ 0.92
TRIM13-204ENST00000420995 USP35Q9P2H5 1018 aa20.81■□□□□ 0.92
TRIM13-204ENST00000420995 GOLGA2Q08379 1002 aa20.8■□□□□ 0.92
TRIM13-204ENST00000420995 PPM1GO15355 546 aaPredicted RBP20.79■□□□□ 0.92
TRIM13-204ENST00000420995 SLC4A3P48751 1232 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms