RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 OSBPP22059 807 aa11.47□□□□□ -0.57
EPHA4-205ENST00000419964 SYNJ1O43426 1573 aa11.45□□□□□ -0.58
EPHA4-205ENST00000419964 LHX8Q68G74 356 aa11.45□□□□□ -0.58
EPHA4-205ENST00000419964 FAM9AQ8IZU1 332 aaPredicted RBP11.45□□□□□ -0.58
EPHA4-205ENST00000419964 PHF14O94880 888 aa11.44□□□□□ -0.58
EPHA4-205ENST00000419964 ARSIQ5FYB1 569 aa11.44□□□□□ -0.58
EPHA4-205ENST00000419964 OTUD5Q96G74 571 aa11.44□□□□□ -0.58
EPHA4-205ENST00000419964 EPAS1Q99814 870 aa11.44□□□□□ -0.58
EPHA4-205ENST00000419964 KDM4FA0A1W2PPD8 638 aa11.43□□□□□ -0.58
EPHA4-205ENST00000419964 NUTM2FA1L443 756 aa11.43□□□□□ -0.58
EPHA4-205ENST00000419964 ZMYND10O75800 440 aa11.43□□□□□ -0.58
EPHA4-205ENST00000419964 GPR153Q6NV75 609 aa11.42□□□□□ -0.58
EPHA4-205ENST00000419964 NUDT7P0C024 238 aa11.41□□□□□ -0.58
EPHA4-205ENST00000419964 BARGINQ6ZT62 677 aa11.4□□□□□ -0.58
EPHA4-205ENST00000419964 JPH4Q96JJ6 628 aa11.4□□□□□ -0.58
EPHA4-205ENST00000419964 TYW1BQ6NUM6 668 aa11.39□□□□□ -0.59
EPHA4-205ENST00000419964 KHSRPQ92945 711 aaKnown RBP eCLIP11.39□□□□□ -0.59
EPHA4-205ENST00000419964 FBXW7Q969H0 707 aa11.39□□□□□ -0.59
EPHA4-205ENST00000419964 PCDHGA10Q9Y5H3 936 aa11.39□□□□□ -0.59
EPHA4-205ENST00000419964 LAMC3Q9Y6N6 1575 aa11.39□□□□□ -0.59
EPHA4-205ENST00000419964 CEP164Q9UPV0 1460 aa11.38□□□□□ -0.59
EPHA4-205ENST00000419964 SOGA1O94964 1423 aa11.38□□□□□ -0.59
EPHA4-205ENST00000419964 GOLGA3Q08378 1498 aa11.38□□□□□ -0.59
EPHA4-205ENST00000419964 FOSBP53539 338 aa11.37□□□□□ -0.59
EPHA4-205ENST00000419964 EN1Q05925 392 aaPredicted RBP11.37□□□□□ -0.59
EPHA4-205ENST00000419964 KIF21BO75037 1637 aa11.37□□□□□ -0.59
EPHA4-205ENST00000419964 MAP3K7O43318 606 aa11.36□□□□□ -0.59
EPHA4-205ENST00000419964 FCHSD2O94868 740 aa11.36□□□□□ -0.59
EPHA4-205ENST00000419964 KRI1Q8N9T8 703 aaKnown RBP11.36□□□□□ -0.59
EPHA4-205ENST00000419964 PRIM1P49642 420 aaKnown RBP11.35□□□□□ -0.59
EPHA4-205ENST00000419964 ZNF454Q8N9F8 522 aa11.35□□□□□ -0.59
EPHA4-205ENST00000419964 SLC24A3Q9HC58 644 aa11.35□□□□□ -0.59
EPHA4-205ENST00000419964 TNIKQ9UKE5 1360 aa11.35□□□□□ -0.59
EPHA4-205ENST00000419964 CUX1P39880 1505 aa11.35□□□□□ -0.59
EPHA4-205ENST00000419964 GPR37O15354 613 aa11.34□□□□□ -0.59
EPHA4-205ENST00000419964 RBM33Q96EV2 1170 aaKnown RBP11.34□□□□□ -0.59
EPHA4-205ENST00000419964 FANCD2Q9BXW9 1451 aa11.33□□□□□ -0.6
EPHA4-205ENST00000419964 PSDA5PKW4 1024 aaPredicted RBP11.33□□□□□ -0.6
EPHA4-205ENST00000419964 HOXB1P14653 301 aaPredicted RBP11.33□□□□□ -0.6
EPHA4-205ENST00000419964 HIC1Q14526 733 aa11.33□□□□□ -0.6
EPHA4-205ENST00000419964 ZDHHC16Q969W1 377 aa11.33□□□□□ -0.6
EPHA4-205ENST00000419964 KIF27Q86VH2 1401 aa11.33□□□□□ -0.6
EPHA4-205ENST00000419964 GNPATO15228 680 aa11.31□□□□□ -0.6
EPHA4-205ENST00000419964 PTGDRQ13258 359 aa11.31□□□□□ -0.6
EPHA4-205ENST00000419964 LHX6Q9UPM6 363 aa11.31□□□□□ -0.6
EPHA4-205ENST00000419964 PDS5BQ9NTI5 1447 aa11.31□□□□□ -0.6
EPHA4-205ENST00000419964 AK7Q96M32 723 aa11.3□□□□□ -0.6
EPHA4-205ENST00000419964 ERICH3Q5RHP9 1530 aa11.3□□□□□ -0.6
EPHA4-205ENST00000419964 PPP4R3BQ5MIZ7 849 aa11.29□□□□□ -0.6
EPHA4-205ENST00000419964 DNMBPQ6XZF7 1577 aa11.28□□□□□ -0.6
EPHA4-205ENST00000419964 RUSC2Q8N2Y8 1516 aa11.28□□□□□ -0.6
EPHA4-205ENST00000419964 MINK1Q8N4C8 1332 aaPredicted RBP11.28□□□□□ -0.6
EPHA4-205ENST00000419964 UBTFP17480 764 aaKnown RBP11.27□□□□□ -0.61
EPHA4-205ENST00000419964 TSR1Q2NL82 804 aaKnown RBP11.27□□□□□ -0.61
EPHA4-205ENST00000419964 CERKQ8TCT0 537 aa11.27□□□□□ -0.61
EPHA4-205ENST00000419964 CDHR5Q9HBB8 845 aa11.27□□□□□ -0.61
EPHA4-205ENST00000419964 TRIM26Q12899 539 aaPredicted RBP11.26□□□□□ -0.61
EPHA4-205ENST00000419964 MAP2K5Q13163 448 aa11.26□□□□□ -0.61
EPHA4-205ENST00000419964 C6orf132Q5T0Z8 1188 aa11.26□□□□□ -0.61
EPHA4-205ENST00000419964 CEP162Q5TB80 1403 aa11.26□□□□□ -0.61
EPHA4-205ENST00000419964 ADAM33Q9BZ11 813 aa11.25□□□□□ -0.61
EPHA4-205ENST00000419964 NPDC1Q9NQX5 325 aaPredicted RBP11.25□□□□□ -0.61
EPHA4-205ENST00000419964 IRF6O14896 467 aa11.23□□□□□ -0.61
EPHA4-205ENST00000419964 FGD5Q6ZNL6 1462 aa11.23□□□□□ -0.61
EPHA4-205ENST00000419964 PRXQ9BXM0 1461 aa11.23□□□□□ -0.61
EPHA4-205ENST00000419964 BCL2L12Q9HB09 334 aa11.22□□□□□ -0.61
EPHA4-205ENST00000419964 FECHP22830 423 aa11.21□□□□□ -0.61
EPHA4-205ENST00000419964 TOPBP1Q92547 1522 aa11.2□□□□□ -0.62
EPHA4-205ENST00000419964 BRPF1P55201 1214 aaPredicted RBP11.2□□□□□ -0.62
EPHA4-205ENST00000419964 NEUROD2Q15784 382 aa11.2□□□□□ -0.62
EPHA4-205ENST00000419964 TRIM66O15016 1216 aa11.19□□□□□ -0.62
EPHA4-205ENST00000419964 PTPREP23469 700 aa11.19□□□□□ -0.62
EPHA4-205ENST00000419964 CCDC102AQ96A19 550 aa11.19□□□□□ -0.62
EPHA4-205ENST00000419964 NESP48681 1621 aa11.19□□□□□ -0.62
EPHA4-205ENST00000419964 CUX2O14529 1486 aa11.19□□□□□ -0.62
EPHA4-205ENST00000419964 ST18O60284 1047 aa11.18□□□□□ -0.62
EPHA4-205ENST00000419964 ABCA10Q8WWZ4 1543 aa11.18□□□□□ -0.62
EPHA4-205ENST00000419964 RAPGEF2Q9Y4G8 1499 aa11.18□□□□□ -0.62
EPHA4-205ENST00000419964 ERBB3P21860 1342 aa11.17□□□□□ -0.62
EPHA4-205ENST00000419964 PCGF6Q9BYE7 350 aa11.17□□□□□ -0.62
EPHA4-205ENST00000419964 RBM27Q9P2N5 1060 aaKnown RBP11.17□□□□□ -0.62
EPHA4-205ENST00000419964 CLIP1P30622 1438 aa11.17□□□□□ -0.62
EPHA4-205ENST00000419964 KCNH8Q96L42 1107 aa11.16□□□□□ -0.62
EPHA4-205ENST00000419964 POLA1P09884 1462 aaPredicted RBP11.15□□□□□ -0.62
EPHA4-205ENST00000419964 EMP3P54852 163 aa11.15□□□□□ -0.62
EPHA4-205ENST00000419964 PDE4DQ08499 809 aa11.15□□□□□ -0.62
EPHA4-205ENST00000419964 PPP1R3GB7ZBB8 358 aa11.14□□□□□ -0.63
EPHA4-205ENST00000419964 PRSS12P56730 875 aa11.14□□□□□ -0.63
EPHA4-205ENST00000419964 FAM163AQ96GL9 167 aaPredicted RBP11.14□□□□□ -0.63
EPHA4-205ENST00000419964 VARS2Q5ST30 1063 aaKnown RBP11.13□□□□□ -0.63
EPHA4-205ENST00000419964 PADI6Q6TGC4 694 aa11.13□□□□□ -0.63
EPHA4-205ENST00000419964 CUL7Q14999 1698 aa11.13□□□□□ -0.63
EPHA4-205ENST00000419964 URB2Q14146 1524 aaKnown RBP11.13□□□□□ -0.63
EPHA4-205ENST00000419964 IGF1RP08069 1367 aa11.13□□□□□ -0.63
EPHA4-205ENST00000419964 COL9A1P20849 921 aa11.12□□□□□ -0.63
EPHA4-205ENST00000419964 CDCA7LQ96GN5 454 aa11.12□□□□□ -0.63
EPHA4-205ENST00000419964 KIF21AQ7Z4S6 1674 aa11.11□□□□□ -0.63
EPHA4-205ENST00000419964 OATP04181 439 aa11.11□□□□□ -0.63
EPHA4-205ENST00000419964 AMHR2Q16671 573 aa11.11□□□□□ -0.63
EPHA4-205ENST00000419964 TTC13Q8NBP0 860 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms