RNA–Protein interactions for RNA: ENST00000419314.5

CCT6P3-201, Transcript of chaperonin containing TCP1 subunit 6 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CCT6P3, Length 3,702 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6P3-201ENST00000419314 SHANK2Q9UPX8 1470 aa18.75■□□□□ 0.59
CCT6P3-201ENST00000419314 TMF1P82094 1093 aa18.75■□□□□ 0.59
CCT6P3-201ENST00000419314 WASHC2CQ9Y4E1 1318 aa18.74■□□□□ 0.59
CCT6P3-201ENST00000419314 STAG3Q9UJ98 1225 aa18.74■□□□□ 0.59
CCT6P3-201ENST00000419314 TTC37Q6PGP7 1564 aa18.74■□□□□ 0.59
CCT6P3-201ENST00000419314 ASXL2Q76L83 1435 aa18.73■□□□□ 0.59
CCT6P3-201ENST00000419314 MLECQ14165 292 aa18.73■□□□□ 0.59
CCT6P3-201ENST00000419314 SAMD9LQ8IVG5 1584 aa18.73■□□□□ 0.59
CCT6P3-201ENST00000419314 FANCAO15360 1455 aa18.73■□□□□ 0.59
CCT6P3-201ENST00000419314 TEX14Q8IWB6 1497 aa18.73■□□□□ 0.59
CCT6P3-201ENST00000419314 PLPPR3Q6T4P5 718 aa18.72■□□□□ 0.59
CCT6P3-201ENST00000419314 ADCY10Q96PN6 1610 aa18.71■□□□□ 0.58
CCT6P3-201ENST00000419314 ADGRL1O94910 1474 aa18.7■□□□□ 0.58
CCT6P3-201ENST00000419314 WDR7Q9Y4E6 1490 aa18.7■□□□□ 0.58
CCT6P3-201ENST00000419314 FAM135AQ9P2D6 1515 aa18.7■□□□□ 0.58
CCT6P3-201ENST00000419314 FAM69CQ0P6D2 419 aa18.69■□□□□ 0.58
CCT6P3-201ENST00000419314 CD109Q6YHK3 1445 aa18.68■□□□□ 0.58
CCT6P3-201ENST00000419314 KNSTRNQ9Y448 316 aa18.67■□□□□ 0.58
CCT6P3-201ENST00000419314 ADGBQ8N7X0 1667 aa18.67■□□□□ 0.58
CCT6P3-201ENST00000419314 KDM5BQ9UGL1 1544 aa18.66■□□□□ 0.58
CCT6P3-201ENST00000419314 PANK3Q9H999 370 aa18.66■□□□□ 0.58
CCT6P3-201ENST00000419314 ARHGEF12Q9NZN5 1544 aa18.66■□□□□ 0.58
CCT6P3-201ENST00000419314 ESF1Q9H501 851 aaKnown RBP18.65■□□□□ 0.58
CCT6P3-201ENST00000419314 SAFB2Q14151 953 aaKnown RBP eCLIP18.64■□□□□ 0.584e-6■□□□□ 10.9
CCT6P3-201ENST00000419314 CFAP70Q5T0N1 1121 aa18.63■□□□□ 0.57
CCT6P3-201ENST00000419314 ARHGEF5Q12774 1597 aa18.63■□□□□ 0.57
CCT6P3-201ENST00000419314 ZCCHC11Q5TAX3 1644 aaKnown RBP18.62■□□□□ 0.57
CCT6P3-201ENST00000419314 PREX2Q70Z35 1606 aa18.62■□□□□ 0.57
CCT6P3-201ENST00000419314 TRAK1Q9UPV9 953 aa18.61■□□□□ 0.57
CCT6P3-201ENST00000419314 CDC42BPBQ9Y5S2 1711 aa18.61■□□□□ 0.57
CCT6P3-201ENST00000419314 UHRF1BP1LA0JNW5 1464 aa18.6■□□□□ 0.57
CCT6P3-201ENST00000419314 DUOX2Q9NRD8 1548 aa18.6■□□□□ 0.57
CCT6P3-201ENST00000419314 CLASP1Q7Z460 1538 aa18.6■□□□□ 0.57
CCT6P3-201ENST00000419314 CDCA8Q53HL2 280 aa18.6■□□□□ 0.57
CCT6P3-201ENST00000419314 KTN1Q86UP2 1357 aaKnown RBP18.59■□□□□ 0.57
CCT6P3-201ENST00000419314 STK26Q9P289 416 aa18.59■□□□□ 0.57
CCT6P3-201ENST00000419314 SHROOM2Q13796 1616 aa18.58■□□□□ 0.57
CCT6P3-201ENST00000419314 MYO5CQ9NQX4 1742 aa18.58■□□□□ 0.57
CCT6P3-201ENST00000419314 RALBP1Q15311 655 aa18.58■□□□□ 0.56
CCT6P3-201ENST00000419314 ARID4BQ4LE39 1312 aaPredicted RBP18.57■□□□□ 0.56
CCT6P3-201ENST00000419314 TNNT2P45379 298 aaPredicted RBP18.57■□□□□ 0.56
CCT6P3-201ENST00000419314 DHX29Q7Z478 1369 aaKnown RBP18.56■□□□□ 0.56
CCT6P3-201ENST00000419314 ERBINQ96RT1 1412 aa18.56■□□□□ 0.56
CCT6P3-201ENST00000419314 TMEM132EQ6IEE7 984 aa18.56■□□□□ 0.56
CCT6P3-201ENST00000419314 SPATA31E1Q6ZUB1 1445 aa18.55■□□□□ 0.56
CCT6P3-201ENST00000419314 WDR43Q15061 677 aaKnown RBP eCLIP18.55■□□□□ 0.56
CCT6P3-201ENST00000419314 CROCC2H7BZ55 1655 aa18.53■□□□□ 0.56
CCT6P3-201ENST00000419314 RALGAPBQ86X10 1494 aa18.53■□□□□ 0.56
CCT6P3-201ENST00000419314 MYBBP1AQ9BQG0 1328 aaKnown RBP18.53■□□□□ 0.56
CCT6P3-201ENST00000419314 NLRP13Q86W25 1043 aa18.52■□□□□ 0.56
CCT6P3-201ENST00000419314 PRAG1Q86YV5 1406 aa18.52■□□□□ 0.56
CCT6P3-201ENST00000419314 ADGRF5Q8IZF2 1346 aa18.51■□□□□ 0.55
CCT6P3-201ENST00000419314 PLA2R1Q13018 1463 aa18.5■□□□□ 0.55
CCT6P3-201ENST00000419314 A2MP01023 1474 aa18.49■□□□□ 0.55
CCT6P3-201ENST00000419314 ABCC1P33527 1531 aa18.49■□□□□ 0.55
CCT6P3-201ENST00000419314 UHRF1BP1Q6BDS2 1440 aa18.49■□□□□ 0.55
CCT6P3-201ENST00000419314 RTEL1-TNFRSF6BF6WH68 1400 aa18.48■□□□□ 0.55
CCT6P3-201ENST00000419314 ZBED9Q6R2W3 1325 aa18.48■□□□□ 0.55
CCT6P3-201ENST00000419314 DISP3Q9P2K9 1392 aa18.47■□□□□ 0.55
CCT6P3-201ENST00000419314 B4GALNT3Q6L9W6 998 aa18.47■□□□□ 0.55
CCT6P3-201ENST00000419314 PNISRQ8TF01 805 aaKnown RBP18.46■□□□□ 0.55
CCT6P3-201ENST00000419314 POGKQ9P215 609 aa18.46■□□□□ 0.55
CCT6P3-201ENST00000419314 EIF3AQ14152 1382 aaKnown RBP18.45■□□□□ 0.54
CCT6P3-201ENST00000419314 TESK2Q96S53 571 aa18.45■□□□□ 0.54
CCT6P3-201ENST00000419314 ATP7AQ04656 1500 aa18.44■□□□□ 0.54
CCT6P3-201ENST00000419314 STAC3Q96MF2 364 aa18.43■□□□□ 0.54
CCT6P3-201ENST00000419314 ZNF518AQ6AHZ1 1483 aa18.43■□□□□ 0.54
CCT6P3-201ENST00000419314 SRPK2P78362 688 aaKnown RBP18.42■□□□□ 0.54
CCT6P3-201ENST00000419314 KDM5DQ9BY66 1539 aa18.42■□□□□ 0.54
CCT6P3-201ENST00000419314 VGFO15240 615 aaPredicted RBP18.41■□□□□ 0.54
CCT6P3-201ENST00000419314 CCDC136Q96JN2 1154 aa18.4■□□□□ 0.54
CCT6P3-201ENST00000419314 TRHP20396 242 aaPredicted RBP18.4■□□□□ 0.54
CCT6P3-201ENST00000419314 NUDCQ9Y266 331 aa18.4■□□□□ 0.54
CCT6P3-201ENST00000419314 CFAP65Q6ZU64 1925 aaKnown RBP18.39■□□□□ 0.54
CCT6P3-201ENST00000419314 NEUROD2Q15784 382 aa18.39■□□□□ 0.54
CCT6P3-201ENST00000419314 FBXO31Q5XUX0 539 aaPredicted RBP18.39■□□□□ 0.54
CCT6P3-201ENST00000419314 CENPJQ9HC77 1338 aaPredicted RBP18.39■□□□□ 0.53
CCT6P3-201ENST00000419314 MAST1Q9Y2H9 1570 aa18.38■□□□□ 0.53
CCT6P3-201ENST00000419314 IDI1Q13907 227 aa18.38■□□□□ 0.53
CCT6P3-201ENST00000419314 CCDC146Q8IYE0 955 aa18.37■□□□□ 0.53
CCT6P3-201ENST00000419314 SLC24A1O60721 1099 aa18.37■□□□□ 0.53
CCT6P3-201ENST00000419314 MORC1Q86VD1 984 aa18.37■□□□□ 0.53
CCT6P3-201ENST00000419314 PPP4R2Q9NY27 417 aa18.37■□□□□ 0.53
CCT6P3-201ENST00000419314 ZFYVE16Q7Z3T8 1539 aa18.35■□□□□ 0.53
CCT6P3-201ENST00000419314 BRD4O60885 1362 aaPredicted RBP18.35■□□□□ 0.53
CCT6P3-201ENST00000419314 NOS1P29475 1434 aa18.35■□□□□ 0.53
CCT6P3-201ENST00000419314 SLC12A5Q9H2X9 1139 aa18.35■□□□□ 0.53
CCT6P3-201ENST00000419314 ATP10AO60312 1499 aa18.34■□□□□ 0.53
CCT6P3-201ENST00000419314 PLXNC1O60486 1568 aa18.34■□□□□ 0.53
CCT6P3-201ENST00000419314 TSHZ2Q9NRE2 1034 aa18.34■□□□□ 0.53
CCT6P3-201ENST00000419314 MINK1Q8N4C8 1332 aaPredicted RBP18.34■□□□□ 0.53
CCT6P3-201ENST00000419314 KDM5CP41229 1560 aa18.33■□□□□ 0.52
CCT6P3-201ENST00000419314 PER1O15534 1290 aaPredicted RBP18.32■□□□□ 0.52
CCT6P3-201ENST00000419314 ADAMTS8Q9UP79 889 aa18.32■□□□□ 0.52
CCT6P3-201ENST00000419314 CABP2Q9NPB3 220 aa18.32■□□□□ 0.52
CCT6P3-201ENST00000419314 UGGT1Q9NYU2 1555 aa18.32■□□□□ 0.52
CCT6P3-201ENST00000419314 BCORL1Q5H9F3 1711 aa18.31■□□□□ 0.52
CCT6P3-201ENST00000419314 POGZQ7Z3K3 1410 aa18.31■□□□□ 0.52
CCT6P3-201ENST00000419314 PPP2R1AP30153 589 aa18.31■□□□□ 0.52
CCT6P3-201ENST00000419314 CDCA7LQ96GN5 454 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms