RNA–Protein interactions for RNA: ENST00000418674.1

PTPRC-207, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-207ENST00000418674 NBR1Q14596 966 aa7.15□□□□□ -1.26
PTPRC-207ENST00000418674 P3H3Q8IVL6 736 aa7.15□□□□□ -1.26
PTPRC-207ENST00000418674 ARHGEF1Q92888 912 aaKnown RBP7.15□□□□□ -1.26
PTPRC-207ENST00000418674 STAC3Q96MF2 364 aa7.15□□□□□ -1.26
PTPRC-207ENST00000418674 PPP1R3GB7ZBB8 358 aa7.14□□□□□ -1.27
PTPRC-207ENST00000418674 SLC4A5Q9BY07 1137 aa7.14□□□□□ -1.27
PTPRC-207ENST00000418674 KCNV2Q8TDN2 545 aa7.13□□□□□ -1.27
PTPRC-207ENST00000418674 RBM33Q96EV2 1170 aaKnown RBP7.13□□□□□ -1.27
PTPRC-207ENST00000418674 ZBED2Q9BTP6 218 aa7.13□□□□□ -1.27
PTPRC-207ENST00000418674 VPS9D1Q9Y2B5 631 aa7.13□□□□□ -1.27
PTPRC-207ENST00000418674 GRXCR2A6NFK2 248 aa7.12□□□□□ -1.27
PTPRC-207ENST00000418674 HRO43593 1189 aa7.12□□□□□ -1.27
PTPRC-207ENST00000418674 MAP3K7O43318 606 aa7.11□□□□□ -1.27
PTPRC-207ENST00000418674 EN1Q05925 392 aaPredicted RBP7.11□□□□□ -1.27
PTPRC-207ENST00000418674 C6orf132Q5T0Z8 1188 aa7.11□□□□□ -1.27
PTPRC-207ENST00000418674 COL9A1P20849 921 aa7.1□□□□□ -1.27
PTPRC-207ENST00000418674 NBPF3Q9H094 633 aa7.08□□□□□ -1.28
PTPRC-207ENST00000418674 BHMG1C9JSJ3 638 aaPredicted RBP7.07□□□□□ -1.28
PTPRC-207ENST00000418674 TSR1Q2NL82 804 aaKnown RBP7.07□□□□□ -1.28
PTPRC-207ENST00000418674 PROX2Q3B8N5 592 aa7.07□□□□□ -1.28
PTPRC-207ENST00000418674 MRPL50Q8N5N7 158 aaKnown RBP7.07□□□□□ -1.28
PTPRC-207ENST00000418674 GOLGA8CPA6NN73 597 aa7.06□□□□□ -1.28
PTPRC-207ENST00000418674 OSBPP22059 807 aa7.06□□□□□ -1.28
PTPRC-207ENST00000418674 RABGEF1Q9UJ41 708 aa7.06□□□□□ -1.28
PTPRC-207ENST00000418674 ONECUT3O60422 494 aaPredicted RBP7.05□□□□□ -1.28
PTPRC-207ENST00000418674 KCTD12Q96CX2 325 aaKnown RBP7.05□□□□□ -1.28
PTPRC-207ENST00000418674 TRIM6-TRIM34B2RNG4 842 aa7.04□□□□□ -1.28
PTPRC-207ENST00000418674 PRIM1P49642 420 aaKnown RBP7.04□□□□□ -1.28
PTPRC-207ENST00000418674 VSIG10Q8N0Z9 540 aa7.04□□□□□ -1.28
PTPRC-207ENST00000418674 CERKQ8TCT0 537 aa7.04□□□□□ -1.28
PTPRC-207ENST00000418674 MLLT3P42568 568 aaPredicted RBP7.03□□□□□ -1.28
PTPRC-207ENST00000418674 KIAA1468Q9P260 1216 aa7.03□□□□□ -1.28
PTPRC-207ENST00000418674 HCSTQ9UBK5 93 aa7.03□□□□□ -1.28
PTPRC-207ENST00000418674 KDM2AQ9Y2K7 1162 aa7.03□□□□□ -1.28
PTPRC-207ENST00000418674 LAPTM4BQ86VI4 370 aa7.01□□□□□ -1.29
PTPRC-207ENST00000418674 PACS2Q86VP3 889 aa7.01□□□□□ -1.29
PTPRC-207ENST00000418674 WNT2BQ93097 391 aa7.01□□□□□ -1.29
PTPRC-207ENST00000418674 CDHR5Q9HBB8 845 aa7.01□□□□□ -1.29
PTPRC-207ENST00000418674 SEMA3EO15041 775 aa7□□□□□ -1.29
PTPRC-207ENST00000418674 PRSS12P56730 875 aa7□□□□□ -1.29
PTPRC-207ENST00000418674 CDCA7LQ96GN5 454 aa7□□□□□ -1.29
PTPRC-207ENST00000418674 ANKK1Q8NFD2 765 aa6.99□□□□□ -1.29
PTPRC-207ENST00000418674 SEPT9Q9UHD8 586 aaPredicted RBP6.99□□□□□ -1.29
PTPRC-207ENST00000418674 TSKSQ9UJT2 592 aa6.99□□□□□ -1.29
PTPRC-207ENST00000418674 THSD4Q6ZMP0 1018 aa6.98□□□□□ -1.29
PTPRC-207ENST00000418674 RBM27Q9P2N5 1060 aaKnown RBP6.98□□□□□ -1.29
PTPRC-207ENST00000418674 NBPF26B4DH59 902 aa6.97□□□□□ -1.29
PTPRC-207ENST00000418674 PTPN5P54829 565 aa6.97□□□□□ -1.29
PTPRC-207ENST00000418674 FAM98CQ17RN3 349 aaKnown RBP6.97□□□□□ -1.29
PTPRC-207ENST00000418674 SMYD5Q6GMV2 418 aa6.97□□□□□ -1.29
PTPRC-207ENST00000418674 ZFRQ96KR1 1074 aaKnown RBP6.97□□□□□ -1.29
PTPRC-207ENST00000418674 TESPA1A2RU30 521 aaPredicted RBP6.96□□□□□ -1.3
PTPRC-207ENST00000418674 NUTM2FA1L443 756 aa6.95□□□□□ -1.3
PTPRC-207ENST00000418674 NPDC1Q9NQX5 325 aaPredicted RBP6.95□□□□□ -1.3
PTPRC-207ENST00000418674 FAM198AQ9UFP1 575 aa6.95□□□□□ -1.3
PTPRC-207ENST00000418674 PNMA3Q9UL41 463 aa6.95□□□□□ -1.3
PTPRC-207ENST00000418674 PADI6Q6TGC4 694 aa6.94□□□□□ -1.3
PTPRC-207ENST00000418674 TATDN2Q93075 761 aa6.94□□□□□ -1.3
PTPRC-207ENST00000418674 SOWAHBA6NEL2 793 aa6.93□□□□□ -1.3
PTPRC-207ENST00000418674 SMAPO00193 183 aa6.93□□□□□ -1.3
PTPRC-207ENST00000418674 BCAMP50895 628 aa6.93□□□□□ -1.3
PTPRC-207ENST00000418674 PTGDRQ13258 359 aa6.93□□□□□ -1.3
PTPRC-207ENST00000418674 LRCH3Q96II8 777 aa6.93□□□□□ -1.3
PTPRC-207ENST00000418674 FCHSD2O94868 740 aa6.92□□□□□ -1.3
PTPRC-207ENST00000418674 NUDT18Q6ZVK8 323 aa6.92□□□□□ -1.3
PTPRC-207ENST00000418674 TTC13Q8NBP0 860 aa6.92□□□□□ -1.3
PTPRC-207ENST00000418674 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.92□□□□□ -1.3
PTPRC-207ENST00000418674 PLA2G2EQ9NZK7 142 aa6.91□□□□□ -1.3
PTPRC-207ENST00000418674 C3orf80F5H4A9 247 aa6.9□□□□□ -1.3
PTPRC-207ENST00000418674 TULP1O00294 542 aaPredicted RBP6.9□□□□□ -1.3
PTPRC-207ENST00000418674 HDGFP51858 240 aaKnown RBP6.9□□□□□ -1.3
PTPRC-207ENST00000418674 RBM26Q5T8P6 1007 aaKnown RBP6.9□□□□□ -1.3
PTPRC-207ENST00000418674 NYAP1Q6ZVC0 841 aa6.89□□□□□ -1.31
PTPRC-207ENST00000418674 SAMD7Q7Z3H4 446 aa6.89□□□□□ -1.31
PTPRC-207ENST00000418674 TSR3Q9UJK0 312 aaKnown RBP6.89□□□□□ -1.31
PTPRC-207ENST00000418674 HPS5Q9UPZ3 1129 aa6.89□□□□□ -1.31
PTPRC-207ENST00000418674 HIC1Q14526 733 aa6.87□□□□□ -1.31
PTPRC-207ENST00000418674 WBP1LQ9NX94 342 aa6.87□□□□□ -1.31
PTPRC-207ENST00000418674 RNF40O75150 1001 aa6.86□□□□□ -1.31
PTPRC-207ENST00000418674 PPP4CP60510 307 aa6.86□□□□□ -1.31
PTPRC-207ENST00000418674 GPIHBP1Q8IV16 184 aa6.86□□□□□ -1.31
PTPRC-207ENST00000418674 RBM46Q8TBY0 533 aaKnown RBP6.86□□□□□ -1.31
PTPRC-207ENST00000418674 EYA1Q99502 592 aa6.86□□□□□ -1.31
PTPRC-207ENST00000418674 SLC4A3P48751 1232 aa6.85□□□□□ -1.31
PTPRC-207ENST00000418674 ADGRG1Q9Y653 693 aa6.85□□□□□ -1.31
PTPRC-207ENST00000418674 GNPATO15228 680 aa6.84□□□□□ -1.31
PTPRC-207ENST00000418674 DNAJB2P25686 324 aa6.84□□□□□ -1.31
PTPRC-207ENST00000418674 SWT1Q5T5J6 900 aaKnown RBP6.84□□□□□ -1.31
PTPRC-207ENST00000418674 NECTIN2Q92692 538 aa6.84□□□□□ -1.31
PTPRC-207ENST00000418674 SLF2Q8IX21 1173 aa6.83□□□□□ -1.32
PTPRC-207ENST00000418674 GPR37O15354 613 aa6.82□□□□□ -1.32
PTPRC-207ENST00000418674 OATP04181 439 aa6.82□□□□□ -1.32
PTPRC-207ENST00000418674 FAM161AQ3B820 660 aa6.82□□□□□ -1.32
PTPRC-207ENST00000418674 IFFO2Q5TF58 517 aa6.81□□□□□ -1.32
PTPRC-207ENST00000418674 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.8□□□□□ -1.32
PTPRC-207ENST00000418674 RCCD1A6NED2 376 aa6.8□□□□□ -1.32
PTPRC-207ENST00000418674 ITGBL1O95965 494 aaPredicted RBP6.8□□□□□ -1.32
PTPRC-207ENST00000418674 TMEM134Q9H6X4 195 aa6.8□□□□□ -1.32
PTPRC-207ENST00000418674 FECHP22830 423 aa6.79□□□□□ -1.32
PTPRC-207ENST00000418674 PXYLP1Q8TE99 480 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms