RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 RALGAPBQ86X10 1494 aa15.93■□□□□ 0.14
LIMK1-202ENST00000418310 SKAP1Q86WV1 359 aa15.93■□□□□ 0.14
LIMK1-202ENST00000418310 MYT1LQ9UL68 1186 aa15.93■□□□□ 0.14
LIMK1-202ENST00000418310 ABCC10Q5T3U5 1492 aa15.92■□□□□ 0.14
LIMK1-202ENST00000418310 CDC42BPAQ5VT25 1732 aa15.92■□□□□ 0.14
LIMK1-202ENST00000418310 NUP160Q12769 1436 aa15.92■□□□□ 0.14
LIMK1-202ENST00000418310 PANK3Q9H999 370 aa15.91■□□□□ 0.14
LIMK1-202ENST00000418310 RALBP1Q15311 655 aa15.9■□□□□ 0.14
LIMK1-202ENST00000418310 RCAN3Q9UKA8 241 aa15.9■□□□□ 0.14
LIMK1-202ENST00000418310 KTN1Q86UP2 1357 aaKnown RBP15.9■□□□□ 0.14
LIMK1-202ENST00000418310 CROCC2H7BZ55 1655 aa15.9■□□□□ 0.14
LIMK1-202ENST00000418310 NOP58Q9Y2X3 529 aaKnown RBP15.89■□□□□ 0.13
LIMK1-202ENST00000418310 RRP1P56182 461 aaKnown RBP15.88■□□□□ 0.13
LIMK1-202ENST00000418310 NLRP13Q86W25 1043 aa15.88■□□□□ 0.13
LIMK1-202ENST00000418310 ARID4BQ4LE39 1312 aaPredicted RBP15.88■□□□□ 0.13
LIMK1-202ENST00000418310 UHRF1BP1Q6BDS2 1440 aa15.88■□□□□ 0.13
LIMK1-202ENST00000418310 DISP3Q9P2K9 1392 aa15.87■□□□□ 0.13
LIMK1-202ENST00000418310 POLR1AO95602 1720 aaPredicted RBP15.87■□□□□ 0.13
LIMK1-202ENST00000418310 ANP32AP39687 249 aaKnown RBP15.87■□□□□ 0.13
LIMK1-202ENST00000418310 ABCA8O94911 1581 aa15.86■□□□□ 0.13
LIMK1-202ENST00000418310 ARHGAP5Q13017 1502 aa15.86■□□□□ 0.13
LIMK1-202ENST00000418310 CCDC141Q6ZP82 1450 aa15.86■□□□□ 0.13
LIMK1-202ENST00000418310 FAM135AQ9P2D6 1515 aa15.86■□□□□ 0.13
LIMK1-202ENST00000418310 BRD4O60885 1362 aaPredicted RBP15.86■□□□□ 0.13
LIMK1-202ENST00000418310 ADCY10Q96PN6 1610 aa15.86■□□□□ 0.13
LIMK1-202ENST00000418310 SYCP2Q9BX26 1530 aa15.85■□□□□ 0.13
LIMK1-202ENST00000418310 PLEKHH2Q8IVE3 1493 aa15.85■□□□□ 0.13
LIMK1-202ENST00000418310 PRAG1Q86YV5 1406 aa15.83■□□□□ 0.12
LIMK1-202ENST00000418310 SHANK2Q9UPX8 1470 aa15.82■□□□□ 0.12
LIMK1-202ENST00000418310 RNF123Q5XPI4 1314 aa15.82■□□□□ 0.12
LIMK1-202ENST00000418310 SAMD9LQ8IVG5 1584 aa15.82■□□□□ 0.12
LIMK1-202ENST00000418310 PER1O15534 1290 aaPredicted RBP15.82■□□□□ 0.12
LIMK1-202ENST00000418310 LRPPRCP42704 1394 aaKnown RBP15.81■□□□□ 0.12
LIMK1-202ENST00000418310 TMF1P82094 1093 aa15.81■□□□□ 0.12
LIMK1-202ENST00000418310 TESK2Q96S53 571 aa15.81■□□□□ 0.12
LIMK1-202ENST00000418310 SENP3Q9H4L4 574 aaPredicted RBP15.8■□□□□ 0.12
LIMK1-202ENST00000418310 ARHGEF12Q9NZN5 1544 aa15.8■□□□□ 0.12
LIMK1-202ENST00000418310 AFAP1Q8N556 730 aa15.8■□□□□ 0.12
LIMK1-202ENST00000418310 A2MP01023 1474 aa15.8■□□□□ 0.12
LIMK1-202ENST00000418310 PLA2R1Q13018 1463 aa15.8■□□□□ 0.12
LIMK1-202ENST00000418310 ZBTB47Q9UFB7 747 aaPredicted RBP15.79■□□□□ 0.12
LIMK1-202ENST00000418310 DEKP35659 375 aaKnown RBP15.78■□□□□ 0.12
LIMK1-202ENST00000418310 ADAMTS8Q9UP79 889 aa15.78■□□□□ 0.12
LIMK1-202ENST00000418310 CRBNQ96SW2 442 aa15.78■□□□□ 0.12
LIMK1-202ENST00000418310 KDM5DQ9BY66 1539 aa15.77■□□□□ 0.12
LIMK1-202ENST00000418310 CCDC146Q8IYE0 955 aa15.77■□□□□ 0.12
LIMK1-202ENST00000418310 C20orf194Q5TEA3 1177 aa15.77■□□□□ 0.11
LIMK1-202ENST00000418310 LAS1LQ9Y4W2 734 aaKnown RBP15.77■□□□□ 0.11
LIMK1-202ENST00000418310 PARD3Q8TEW0 1356 aa15.77■□□□□ 0.11
LIMK1-202ENST00000418310 KNSTRNQ9Y448 316 aa15.76■□□□□ 0.11
LIMK1-202ENST00000418310 RSPH4AQ5TD94 716 aa15.76■□□□□ 0.11
LIMK1-202ENST00000418310 IPO9Q96P70 1041 aaKnown RBP15.76■□□□□ 0.11
LIMK1-202ENST00000418310 TTC37Q6PGP7 1564 aa15.76■□□□□ 0.11
LIMK1-202ENST00000418310 ERBINQ96RT1 1412 aa15.75■□□□□ 0.11
LIMK1-202ENST00000418310 CDC42BPBQ9Y5S2 1711 aa15.75■□□□□ 0.11
LIMK1-202ENST00000418310 WDR43Q15061 677 aaKnown RBP eCLIP15.75■□□□□ 0.11
LIMK1-202ENST00000418310 ERCC6L2Q5T890 1561 aa15.75■□□□□ 0.11
LIMK1-202ENST00000418310 CHGAP10645 457 aaKnown RBP15.73■□□□□ 0.11
LIMK1-202ENST00000418310 EFCAB2Q5VUJ9 269 aa15.72■□□□□ 0.11
LIMK1-202ENST00000418310 PDE4AP27815 886 aa15.72■□□□□ 0.11
LIMK1-202ENST00000418310 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.71■□□□□ 0.11
LIMK1-202ENST00000418310 ARHGEF5Q12774 1597 aa15.71■□□□□ 0.11
LIMK1-202ENST00000418310 RTL5Q5HYW3 569 aaPredicted RBP15.7■□□□□ 0.1
LIMK1-202ENST00000418310 SPAG9O60271 1321 aaKnown RBP15.7■□□□□ 0.1
LIMK1-202ENST00000418310 TNNT2P45379 298 aaPredicted RBP15.7■□□□□ 0.1
LIMK1-202ENST00000418310 COL17A1Q9UMD9 1497 aaPredicted RBP15.7■□□□□ 0.1
LIMK1-202ENST00000418310 TRPM1Q7Z4N2 1603 aa15.69■□□□□ 0.1
LIMK1-202ENST00000418310 PREX2Q70Z35 1606 aa15.69■□□□□ 0.1
LIMK1-202ENST00000418310 TRAPPC8Q9Y2L5 1435 aa15.69■□□□□ 0.1
LIMK1-202ENST00000418310 PPP2R1AP30153 589 aa15.69■□□□□ 0.1
LIMK1-202ENST00000418310 KIF3BO15066 747 aa15.69■□□□□ 0.1
LIMK1-202ENST00000418310 PDE3BQ13370 1112 aa15.69■□□□□ 0.1
LIMK1-202ENST00000418310 SLC4A3P48751 1232 aa15.66■□□□□ 0.1
LIMK1-202ENST00000418310 CFAP70Q5T0N1 1121 aa15.66■□□□□ 0.1
LIMK1-202ENST00000418310 NEUROD2Q15784 382 aa15.66■□□□□ 0.1
LIMK1-202ENST00000418310 GPRASP1Q5JY77 1395 aa15.65■□□□□ 0.1
LIMK1-202ENST00000418310 TCERG1O14776 1098 aaKnown RBP15.65■□□□□ 0.1
LIMK1-202ENST00000418310 RGS3P49796 1198 aa15.65■□□□□ 0.1
LIMK1-202ENST00000418310 PLEKHH1Q9ULM0 1364 aa15.64■□□□□ 0.09
LIMK1-202ENST00000418310 E9PCH4 1651 aa15.64■□□□□ 0.09
LIMK1-202ENST00000418310 APAF1O14727 1248 aa15.64■□□□□ 0.09
LIMK1-202ENST00000418310 MAGI2Q86UL8 1455 aa15.64■□□□□ 0.09
LIMK1-202ENST00000418310 CHD1O14646 1710 aa15.62■□□□□ 0.09
LIMK1-202ENST00000418310 BACH2Q9BYV9 841 aa15.62■□□□□ 0.09
LIMK1-202ENST00000418310 AMER1Q5JTC6 1135 aaPredicted RBP15.62■□□□□ 0.09
LIMK1-202ENST00000418310 NUTM2DQ5VT03 806 aaPredicted RBP15.62■□□□□ 0.09
LIMK1-202ENST00000418310 SPINK5Q9NQ38 1064 aaPredicted RBP15.61■□□□□ 0.09
LIMK1-202ENST00000418310 PRDM15P57071 1507 aaPredicted RBP15.6■□□□□ 0.09
LIMK1-202ENST00000418310 GOLGA2Q08379 1002 aa15.6■□□□□ 0.09
LIMK1-202ENST00000418310 NEFMP07197 916 aa15.59■□□□□ 0.09
LIMK1-202ENST00000418310 DUSP27Q5VZP5 1158 aa15.59■□□□□ 0.09
LIMK1-202ENST00000418310 RRP7AQ9Y3A4 280 aaKnown RBP15.59■□□□□ 0.09
LIMK1-202ENST00000418310 DUOX2Q9NRD8 1548 aa15.59■□□□□ 0.09
LIMK1-202ENST00000418310 MYO5CQ9NQX4 1742 aa15.59■□□□□ 0.09
LIMK1-202ENST00000418310 BCAR3O75815 825 aa15.58■□□□□ 0.09
LIMK1-202ENST00000418310 PLCH2O75038 1416 aa15.58■□□□□ 0.09
LIMK1-202ENST00000418310 ADGRF5Q8IZF2 1346 aa15.58■□□□□ 0.08
LIMK1-202ENST00000418310 WASHC2CQ9Y4E1 1318 aa15.58■□□□□ 0.08
LIMK1-202ENST00000418310 DMRT2Q9Y5R5 561 aa15.58■□□□□ 0.08
LIMK1-202ENST00000418310 UNC13BO14795 1591 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms